genome.fa.s860.2.7.7.80.10.50.1000.1.html

Tandem Repeats Finder Program written by:

Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3664
Parameters: 2 7 7 80 10 50 1000
Length:  38729

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment

Table Explanation

Indices	Period Size	Copy Number	Consensus Size	Percent Matches	Percent Indels	Score	A	C	G	T	Entropy (0-2)
512--564	13	3.9	13	78	9	61	22	18	33	24	1.97
511--570	28	2.1	28	96	0	111	23	16	33	26	1.96
523--601	28	2.8	28	82	3	88	22	16	30	30	1.96
7994--8042	26	1.9	25	91	4	80	36	12	8	42	1.72
9706--9754	26	1.9	25	87	4	71	36	12	8	42	1.72
13883--13932	26	1.9	26	95	0	91	38	12	8	42	1.71
15974--16022	26	1.9	25	91	4	80	38	10	8	42	1.68
18069--18115	24	1.9	25	91	4	78	36	12	8	42	1.74
20162--20211	26	1.9	26	95	0	91	38	12	8	42	1.71
21918--21967	26	1.9	26	95	0	91	38	12	8	42	1.71
24030--24079	26	1.9	26	95	0	91	38	12	8	42	1.71
26141--26190	26	1.9	26	95	0	91	38	12	8	42	1.71
28253--28302	26	1.9	26	95	0	91	38	12	8	42	1.71
30364--30413	26	1.9	26	95	0	91	38	12	8	42	1.71
32472--32521	26	1.9	26	95	0	91	38	12	8	42	1.71
34583--34632	26	1.9	26	95	0	91	38	12	8	42	1.71
36675--36724	26	1.9	26	95	0	91	38	12	8	42	1.71

Tables:   1

The End!