Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold696
Parameters: 2 7 7 80 10 50 1000
Length:  65812

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7705--7753
11
4.5
11
74
20
50
30
12
26
30
1.92
15411--15473
21
3.0
21
88
2
90
30
3
33
33
1.74
20489--20542
20
2.7
20
82
0
63
24
20
18
37
1.94
20489--20562
30
2.5
30
86
8
98
21
20
18
39
1.93
20489--20553
20
3.2
20
71
16
53
23
21
16
38
1.93
23225--23310
24
3.5
24
71
4
73
63
1
24
10
1.32
23268--23332
29
2.4
28
87
12
91
69
0
18
12
1.19
23235--23332
12
8.6
12
68
22
59
66
1
20
12
1.30
23287--23335
17
2.7
18
81
9
64
67
0
18
14
1.23
23269--23353
13
6.2
13
71
20
57
69
1
17
11
1.25
23350--23412
33
1.9
33
84
12
85
55
6
25
12
1.60
25183--25236
20
2.7
20
82
0
63
24
20
18
37
1.94
25183--25256
30
2.5
30
86
8
98
21
20
18
39
1.93
25183--25247
20
3.2
20
71
16
53
23
21
16
38
1.93
29770--29835
23
2.9
23
81
0
87
28
6
27
37
1.80
35649--35710
20
3.1
19
75
11
61
30
22
11
35
1.89
36708--36745
13
3.2
12
89
10
60
15
0
7
76
1.01
43485--43545
10
6.1
10
78
12
63
34
13
22
29
1.92
43486--43546
20
3.0
20
83
9
79
34
13
24
27
1.93
44810--44836
12
2.2
12
100
0
54
66
0
18
14
1.25
45654--45759
6
17.3
6
66
9
54
7
16
3
71
1.24
45618--45690
12
5.8
12
71
15
58
15
20
0
64
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45654--45783
18
7.2
17
71
16
59
10
16
3
70
1.26
45705--45759
6
9.3
6
76
4
58
3
14
5
76
1.10
46114--46171
20
2.8
20
76
5
53
10
10
3
75
1.15
46234--46262
10
2.7
11
94
5
51
6
3
6
82
0.93
48692--48764
12
5.8
12
71
15
58
64
0
20
15
1.29
48744--48782
18
2.3
18
86
8
55
69
0
17
12
1.19
51818--51875
10
5.7
10
76
11
64
29
27
13
29
1.94
51818--51878
20
3.0
20
83
9
79
27
26
13
32
1.93
52584--52626
13
3.4
13
96
3
79
74
6
4
13
1.19
55356--55399
22
2.0
22
95
0
79
34
4
36
25
1.76

Tables:   1

The End!