Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2550
Parameters: 2 7 7 80 10 50 1000
Length:  65491

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2589--2783
50
3.9
50
86
2
250
20
30
24
25
1.98
2589--2783
100
2.0
100
90
4
313
20
30
24
25
1.98
2926--2957
13
2.5
13
94
0
55
56
12
0
31
1.37
3168--3225
30
1.9
30
89
0
89
31
24
3
41
1.71
26338--26378
21
2.0
21
90
0
64
29
21
29
19
1.98
39378--39442
32
2.0
32
96
0
121
13
30
21
33
1.92
54309--54349
12
3.4
12
96
0
73
36
26
17
19
1.94
54309--54356
12
4.0
11
84
10
51
35
27
14
22
1.93
56210--56355
37
4.0
37
93
1
242
24
21
16
36
1.94
56319--56683
46
7.6
46
83
10
444
29
22
13
34
1.93
56362--56677
52
6.3
52
84
9
417
28
22
13
35
1.92
56319--56683
194
1.9
197
92
1
619
29
22
13
34
1.93

Tables:   1

The End!