Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3004
Parameters: 2 7 7 80 10 50 1000
Length:  64706

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3135--3181
21
2.2
22
85
11
71
23
0
10
65
1.23
3142--3182
21
2.0
20
95
4
73
24
0
9
65
1.22
4513--4557
23
2.0
23
95
0
81
26
42
4
26
1.74
12488--12559
24
3.0
24
87
0
108
9
48
4
37
1.55
14967--15032
34
1.9
34
87
6
98
48
10
6
34
1.62
15002--15040
14
2.8
13
85
11
51
48
7
2
41
1.45
16310--16460
78
1.9
78
89
0
230
29
21
21
27
1.99
19008--19075
9
7.6
9
89
0
91
36
23
10
29
1.88
19009--19084
27
2.8
27
87
0
107
36
22
10
30
1.88
19008--19097
18
4.9
18
73
11
67
37
22
10
30
1.87
19008--19092
27
3.2
26
86
3
98
37
22
9
30
1.86
19159--19197
18
2.1
19
85
4
53
28
0
2
69
1.02
19539--19580
20
2.1
20
95
0
75
26
7
33
33
1.83
29134--29188
24
2.2
26
81
12
71
45
0
1
52
1.11
29326--29420
45
2.1
45
88
1
138
32
27
5
34
1.79
29401--29452
16
3.2
16
94
0
86
34
36
0
28
1.58
33152--33190
20
2.0
20
85
14
55
61
0
2
35
1.10
34412--35067
218
3.0
218
98
0
1285
28
10
19
41
1.85
35676--35748
36
2.0
36
100
0
146
30
10
9
49
1.70
37212--37293
31
2.6
31
86
0
119
34
14
10
40
1.81
37466--37549
15
5.5
15
67
13
64
19
22
26
32
1.97
37466--37547
31
2.7
31
88
9
132
19
23
24
32
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37507--37583
41
1.9
41
92
7
131
20
20
27
31
1.98
38724--38811
44
2.0
45
80
14
103
18
6
22
52
1.69
42944--42999
21
2.7
21
75
8
62
14
17
25
42
1.87
49073--49101
15
1.9
15
100
0
58
44
6
0
48
1.29
48563--49513
516
1.8
518
93
1
1640
29
17
17
36
1.92
50455--50526
24
3.0
24
87
0
108
9
48
4
37
1.55
52935--53000
34
1.9
34
87
6
98
48
10
6
34
1.62
52970--53008
14
2.8
13
85
11
51
48
7
2
41
1.45
54278--54428
78
1.9
78
89
0
230
29
21
21
27
1.99
56976--57043
9
7.6
9
89
0
91
36
23
10
29
1.88
56977--57052
27
2.8
27
87
0
107
36
22
10
30
1.88
56976--57065
18
4.9
18
73
11
67
37
22
10
30
1.87
56976--57060
27
3.2
26
86
3
98
37
22
9
30
1.86
57127--57165
18
2.1
19
85
4
53
28
0
2
69
1.02
57507--57548
20
2.1
20
95
0
75
26
7
33
33
1.83

Tables:   1

The End!