Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold792
Parameters: 2 7 7 80 10 50 1000
Length:  52899

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4136--4182
24
2.0
24
84
8
62
53
12
4
29
1.58
6855--6960
48
2.2
47
85
9
135
59
1
24
14
1.45
8628--8674
20
2.3
20
85
0
67
29
36
12
21
1.91
14453--14488
15
2.5
14
95
4
63
16
11
2
69
1.29
14531--14575
12
3.7
12
90
3
63
15
2
4
77
1.02
14530--14563
13
2.6
13
100
0
68
11
0
5
82
0.83
15547--15593
23
2.1
23
84
7
62
51
12
4
31
1.59
28201--28231
12
2.6
12
100
0
62
80
6
6
6
1.02
30468--30506
16
2.4
17
82
4
53
58
5
20
15
1.55
36233--36292
29
2.1
29
93
0
102
45
15
8
31
1.75
41593--41657
20
3.3
19
73
16
51
38
16
21
23
1.93
46873--46945
29
2.5
29
95
0
128
45
13
9
31
1.76
49614--49650
14
2.6
15
83
8
51
35
8
5
51
1.55
50543--50599
11
5.0
11
91
4
87
75
8
0
15
1.04
50546--50600
12
4.7
12
90
4
94
80
7
0
12
0.91
50546--50600
23
2.3
24
93
3
94
80
7
0
12
0.91
50642--50681
18
2.3
18
95
4
73
67
5
10
17
1.37
52568--52621
20
2.8
20
85
2
74
29
14
29
25
1.95

Tables:   1

The End!