Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold239_ERROPOS2005311
Parameters: 2 7 7 80 10 50 1000
Length:  99999

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3184--3242
25
2.4
25
80
8
66
20
23
22
33
1.97
7188--7218
4
7.8
4
100
0
62
77
0
22
0
0.77
7182--7242
12
5.0
12
79
15
54
81
1
14
1
0.84
7936--7977
10
3.8
11
80
20
52
38
0
7
54
1.28
13757--13824
34
2.0
34
100
0
136
17
17
23
41
1.90
22631--22688
29
2.0
29
100
0
116
24
10
13
51
1.72
24473--24547
26
2.9
26
86
2
98
29
16
13
41
1.86
24790--24818
9
3.0
10
90
10
51
20
20
0
58
1.39
59857--60514
343
1.9
343
98
0
1271
37
18
13
30
1.89
60674--60808
38
3.4
38
71
15
101
40
15
1
42
1.56
62045--62087
11
3.8
11
80
17
52
30
2
2
65
1.18
62048--62091
23
1.9
23
90
0
70
31
2
4
61
1.28
65492--65525
17
1.9
17
94
5
59
73
0
2
23
0.97
65808--65861
18
3.1
18
79
15
58
29
3
0
66
1.09
65884--65914
7
4.3
7
92
8
53
41
0
0
58
0.98
65819--65919
8
11.5
8
71
20
53
33
0
1
63
1.12
67808--67841
17
2.0
17
88
0
50
79
5
0
14
0.91
67808--67858
27
1.9
26
88
4
75
74
7
0
17
1.05
74636--74677
22
1.9
22
85
0
57
35
16
23
23
1.95
82639--82686
5
9.6
5
100
0
96
18
0
0
81
0.70
85752--85781
9
3.3
9
90
0
51
46
13
10
30
1.75
85861--85930
19
3.6
19
78
14
72
52
7
0
40
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85901--85936
19
1.9
19
94
5
65
55
5
0
38
1.23
85939--85980
20
2.0
21
95
4
77
59
0
0
40
0.97
86102--86132
16
1.9
16
93
0
53
38
6
6
48
1.55
88986--89033
16
3.0
16
84
6
53
43
22
0
33
1.54
89010--89040
4
7.8
4
100
0
62
48
25
0
25
1.52

Tables:   1

The End!