Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1723
Parameters: 2 7 7 80 10 50 1000
Length:  76629

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1942--1991
24
2.1
24
100
0
100
28
8
16
48
1.74
3084--3132
3
16.3
3
91
0
71
63
30
4
2
1.24
9531--9590
29
2.1
29
100
0
120
40
3
23
33
1.71
19036--19078
18
2.4
17
81
11
50
13
11
6
67
1.41
19708--19751
21
2.0
22
83
12
56
29
6
2
61
1.34
22587--23189
202
3.0
199
87
2
839
30
23
15
31
1.95
25344--25383
20
2.0
20
90
0
62
27
22
22
27
1.99
27251--27496
101
2.4
102
91
1
386
30
23
14
31
1.94
36027--36053
14
1.9
14
100
0
54
51
3
7
37
1.48
37876--38059
66
2.8
66
80
5
196
24
23
27
24
2.00
45159--45211
26
2.0
26
88
0
79
67
1
0
30
1.01
55445--55493
10
5.0
10
78
16
50
51
4
0
44
1.20
59670--59697
14
2.0
14
100
0
56
35
14
0
50
1.43
64715--64756
22
2.0
20
86
13
59
38
0
9
52
1.34
66322--66369
3
16.0
3
86
0
69
68
0
2
29
1.01
66464--66517
23
2.4
23
87
6
76
59
7
1
31
1.36
66467--66532
3
21.3
3
75
6
60
62
6
1
30
1.29
68344--68588
126
1.9
126
86
3
350
35
22
16
26
1.95
68470--69156
74
9.4
73
84
9
805
32
21
17
29
1.96
68470--69156
72
9.4
73
84
9
782
32
21
17
29
1.96
68663--69156
146
3.5
143
88
4
648
32
21
16
29
1.96

Tables:   1

The End!