Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2193
Parameters: 2 7 7 80 10 50 1000
Length:  68788

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
710--740
4
8.0
4
92
7
55
77
0
0
22
0.77
8770--8805
13
2.8
13
100
0
72
19
13
0
66
1.24
8854--8885
15
2.1
15
94
0
55
12
3
6
78
1.06
11116--11145
11
2.6
11
94
5
51
76
6
3
13
1.11
12081--12115
18
1.9
18
88
11
54
57
0
20
22
1.41
15630--15667
19
2.0
19
100
0
76
21
21
21
36
1.95
23979--24034
24
2.5
22
91
8
87
73
8
0
17
1.08
23983--24020
10
3.7
10
93
6
67
76
7
0
15
1.01
23979--24034
11
5.0
11
87
12
87
73
8
0
17
1.08
23982--24036
13
4.6
13
91
8
75
78
7
0
14
0.96
24076--24112
16
2.3
16
95
0
65
59
8
13
18
1.58
24997--25093
30
3.2
30
77
2
115
27
25
16
29
1.97
33151--33181
16
1.9
16
100
0
62
29
32
6
32
1.83
57839--57878
11
3.6
11
93
0
62
75
10
2
12
1.15
57921--57962
14
3.0
14
92
0
75
64
0
11
23
1.27
59892--60575
343
2.0
342
96
0
1269
22
22
15
40
1.91

Tables:   1

The End!