Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1644
Parameters: 2 7 7 80 10 50 1000
Length:  58971

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18015--18068
27
2.0
27
100
0
108
18
25
14
40
1.89
18644--18671
4
7.0
4
100
0
56
25
0
0
75
0.81
21042--21096
12
4.6
12
73
15
51
63
0
23
12
1.29
22457--22484
4
7.0
4
100
0
56
25
0
0
75
0.81
24499--24551
18
2.9
18
75
13
54
7
24
0
67
1.16
39777--39823
23
2.1
23
84
7
62
51
12
4
31
1.59
40567--41211
333
1.9
331
94
0
1146
40
18
17
23
1.91
46611--46644
16
2.1
16
100
0
68
20
29
17
32
1.96
49640--49671
16
2.1
16
88
11
50
40
12
18
28
1.87
55189--55221
1
33.0
1
100
0
66
0
0
0
100
0.00

Tables:   1

The End!