Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1767
Parameters: 2 7 7 80 10 50 1000
Length:  52626

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1110--1140
14
2.1
15
94
5
55
35
45
0
19
1.51
2082--2265
41
4.5
40
84
2
224
30
28
17
22
1.97
2087--2281
81
2.4
81
86
5
277
32
28
16
22
1.96
2360--2443
40
2.1
40
86
0
114
23
15
20
40
1.90
7110--7149
19
2.1
19
100
0
80
37
5
15
42
1.68
13797--13840
21
2.1
21
84
12
56
22
0
18
59
1.38
15907--15944
16
2.5
16
87
8
53
55
0
0
44
0.99
17971--18013
21
2.0
21
95
0
77
39
11
2
46
1.53
20163--20200
16
2.5
16
87
8
53
55
0
0
44
0.99
22225--22267
21
2.0
21
95
0
77
39
11
2
46
1.53
24415--24452
16
2.5
16
87
8
53
55
0
0
44
0.99
26477--26519
21
2.0
21
95
0
77
39
11
2
46
1.53
28600--28635
9
4.3
9
83
16
51
55
0
0
44
0.99
30520--30562
21
2.0
21
95
0
77
39
11
2
46
1.53
32711--32748
16
2.5
16
87
8
53
55
0
0
44
0.99
38956--39000
21
2.2
21
92
4
74
40
11
2
46
1.52
43772--43980
22
9.1
23
72
8
158
19
2
34
43
1.66
48150--48314
23
7.2
23
76
5
147
16
2
36
44
1.61
48150--48314
45
3.6
45
77
6
170
16
2
36
44
1.61
51333--51613
27
10.4
27
87
0
337
43
18
19
18
1.89
51791--51834
23
1.9
23
90
0
70
13
22
25
38
1.91
51823--51893
25
2.8
25
87
8
108
12
18
23
45
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52231--52281
21
2.4
22
86
6
77
43
11
3
41
1.60

Tables:   1

The End!