Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1697
Parameters: 2 7 7 80 10 50 1000
Length:  44940

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2599--2636
17
2.2
18
85
4
51
10
23
2
63
1.39
6741--6792
23
2.3
22
75
21
54
9
23
1
65
1.32
6772--6805
12
2.7
13
86
9
52
11
26
0
61
1.30
12924--12970
20
2.3
20
85
0
67
21
12
36
29
1.91
14640--14745
48
2.2
48
85
9
137
14
24
1
59
1.45
14721--14804
18
4.6
18
70
11
62
16
28
2
52
1.56
17373--17419
20
2.3
20
85
0
67
21
12
36
29
1.91
18381--18425
18
2.5
17
82
13
54
73
4
15
6
1.21
18379--18430
18
2.8
18
75
16
52
67
3
19
9
1.35
19909--19952
23
2.0
21
86
8
61
25
20
9
45
1.80
20059--20105
23
2.1
23
84
7
62
51
12
4
31
1.59
22841--22897
10
5.6
10
76
12
53
29
12
26
31
1.92
22838--22898
20
3.0
20
81
9
70
32
11
26
29
1.91
29087--29138
23
2.3
22
75
21
54
9
23
1
65
1.32
32591--32647
16
3.6
16
95
4
98
19
10
5
64
1.43
32688--32739
11
4.7
11
83
7
70
15
0
5
78
0.92
32689--32738
21
2.3
22
83
10
59
16
0
6
78
0.95
32684--32743
22
2.6
24
82
12
90
21
0
6
71
1.08
33733--33779
23
2.1
23
84
7
62
51
12
4
31
1.59
39176--39219
12
3.8
12
93
6
81
18
0
6
75
1.02
39179--39219
11
3.6
11
96
3
73
14
0
7
78
0.96
40211--40257
23
2.1
23
84
7
62
51
12
4
31
1.59

Tables:   1

The End!