Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold937
Parameters: 2 7 7 80 10 50 1000
Length:  34325

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--159
20
2.7
20
82
0
63
24
20
18
37
1.94
106--179
30
2.5
30
86
8
98
21
20
18
39
1.93
106--170
20
3.2
20
71
16
53
23
21
16
38
1.93
2835--2952
12
9.8
12
68
18
50
70
3
18
7
1.26
2852--2955
18
5.6
18
75
5
82
71
3
18
6
1.24
2848--2955
6
17.7
6
70
6
74
71
3
18
6
1.23
2916--2953
13
2.8
13
82
17
51
73
0
18
7
1.06
2917--2967
21
2.4
21
74
6
50
74
1
17
5
1.11
2970--3032
33
1.9
33
84
12
85
53
6
26
12
1.62
4804--4857
20
2.7
20
82
0
63
24
20
18
37
1.94
4804--4877
30
2.5
30
86
8
98
21
20
18
39
1.93
4804--4868
20
3.2
20
71
16
53
23
21
16
38
1.93
6451--6500
1
50.0
1
89
0
64
92
2
0
6
0.47
7526--7643
12
9.8
12
68
18
50
70
3
18
7
1.26
7543--7646
18
5.6
18
75
5
82
71
3
18
6
1.24
7539--7646
6
17.7
6
70
6
74
71
3
18
6
1.23
7607--7644
13
2.8
13
82
17
51
73
0
18
7
1.06
7608--7658
21
2.4
21
74
6
50
74
1
17
5
1.11
7661--7723
33
1.9
33
84
12
85
55
6
25
12
1.60
9500--9553
20
2.7
20
82
0
63
24
20
18
37
1.94
9500--9573
30
2.5
30
86
8
98
21
20
18
39
1.93
9500--9564
20
3.2
20
71
16
53
23
21
16
38
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11171--11222
1
52.0
1
86
0
59
90
0
3
5
0.55
11153--11229
21
3.6
21
79
6
75
84
1
6
7
0.83
11171--11222
23
2.3
23
93
0
86
90
0
3
5
0.55
11153--11223
10
6.8
10
78
9
61
85
1
5
7
0.78
11153--11229
11
7.2
11
77
12
63
84
1
6
7
0.83
12224--12341
12
9.8
12
68
18
50
70
3
18
7
1.26
12241--12344
18
5.6
18
75
5
82
71
3
18
6
1.24
12237--12344
6
17.7
6
70
6
74
71
3
18
6
1.23
12305--12342
13
2.8
13
82
17
51
73
0
18
7
1.06
12306--12356
21
2.4
21
74
6
50
74
1
17
5
1.11
12359--12421
33
1.9
33
84
12
85
55
6
25
12
1.60
14196--14249
20
2.7
20
82
0
63
24
20
18
37
1.94
14196--14269
30
2.5
30
86
8
98
21
20
18
39
1.93
14196--14260
20
3.2
20
71
16
53
23
21
16
38
1.93
30670--30723
20
2.7
20
82
5
65
31
14
29
24
1.95

Tables:   1

The End!