Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3411
Parameters: 2 7 7 80 10 50 1000
Length:  34989

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3093--3130
11
3.2
12
86
13
53
23
7
5
63
1.42
7261--7465
94
2.2
94
92
1
333
56
12
20
10
1.65
10031--10055
12
2.1
12
100
0
50
48
0
44
8
1.32
15603--15654
24
2.2
24
89
0
77
55
9
1
32
1.43
16116--16152
16
2.3
16
100
0
74
37
10
35
16
1.83
18989--19087
27
3.7
27
95
0
171
21
30
28
20
1.98
21954--22017
19
3.1
21
86
6
60
37
18
9
34
1.83
21971--22068
19
5.2
19
90
7
155
36
15
10
37
1.81
21982--22068
36
2.3
37
90
7
140
37
13
11
36
1.81
21971--22078
36
2.9
35
75
20
103
37
14
10
37
1.80
22565--22897
133
2.5
131
89
2
508
26
20
18
34
1.95
22697--23542
220
3.8
220
95
0
1503
27
22
18
32
1.97
23046--23206
89
1.8
89
86
5
238
27
22
18
31
1.97
22460--23337
353
2.5
347
82
9
905
27
21
18
33
1.96
23193--23275
43
1.9
43
85
2
112
24
22
18
34
1.96
23266--23426
89
1.8
89
85
5
229
28
24
16
30
1.97
23600--23701
44
2.3
44
91
1
161
27
21
22
28
1.99
30193--30290
19
5.2
19
86
7
137
36
15
10
37
1.81
30212--30284
36
2.0
36
94
0
128
38
12
10
38
1.78
31659--31714
26
2.2
26
96
0
103
28
7
28
35
1.84

Tables:   1

The End!