Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1081
Parameters: 2 7 7 80 10 50 1000
Length:  72336

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5545--5597
23
2.4
22
76
20
56
9
18
1
69
1.25
9585--9638
23
2.4
22
77
20
58
9
20
1
68
1.27
27551--27597
20
2.3
20
85
0
67
21
12
36
29
1.91
30390--30457
13
5.4
12
72
10
55
2
14
2
79
0.97
30386--30457
25
2.8
25
84
13
94
4
16
2
76
1.06
36435--36487
23
2.4
22
76
20
56
9
18
1
69
1.25
50841--50886
23
2.0
23
100
0
92
21
0
26
52
1.47
53312--53354
20
2.2
20
86
0
59
76
2
9
11
1.10
53335--53365
11
2.7
11
95
5
53
77
0
6
16
0.97
53334--53369
12
3.0
12
88
12
56
72
0
8
19
1.10
55536--55601
19
3.4
18
83
8
69
74
4
15
6
1.18
59685--59747
21
3.0
21
86
6
74
33
30
4
31
1.78
61012--61058
15
3.1
15
84
9
60
70
0
17
12
1.17
61086--61146
12
5.3
12
71
11
56
59
1
24
14
1.45
61088--61137
21
2.3
22
89
6
84
60
0
26
14
1.34
63015--63063
10
4.9
10
78
9
55
26
30
16
26
1.97
63015--63061
20
2.3
20
89
7
69
25
31
17
25
1.97
65529--65561
11
3.0
11
90
0
57
78
9
0
12
0.95
65603--65641
15
2.6
15
100
0
78
64
5
12
17
1.46

Tables:   1

The End!