Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3480
Parameters: 2 7 7 80 10 50 1000
Length:  59862

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9923--10194
136
2.0
136
100
0
544
32
16
18
32
1.94
12829--12901
7
10.4
7
96
0
119
10
0
45
43
1.39
12925--12956
16
2.0
16
93
0
55
18
18
3
59
1.51
27831--27886
21
2.9
18
74
25
60
12
12
21
53
1.71
29798--29841
20
2.2
20
83
4
52
15
9
13
61
1.56
32849--32901
21
2.5
22
78
9
74
69
0
0
30
0.88
32836--32936
30
3.2
32
81
13
122
63
0
0
35
1.01
32836--32936
29
3.3
31
82
13
120
63
0
0
35
1.01
32879--32955
40
1.9
41
89
2
120
61
0
2
36
1.10
33456--33513
30
2.0
29
86
6
82
41
0
1
56
1.09
40826--40866
21
2.0
21
90
9
66
12
17
21
48
1.79
42518--42609
45
2.0
45
100
0
184
28
16
21
33
1.95
49466--49520
23
2.4
23
90
0
92
41
3
14
40
1.63
52510--59862
7
1063.9
7
94
4
12921
13
0
43
42
1.45
52558--52607
25
2.0
25
96
0
91
2
0
60
38
1.09
52565--52600
18
2.0
18
94
0
63
2
0
61
36
1.11

Tables:   1

The End!