Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1792
Parameters: 2 7 7 80 10 50 1000
Length:  59349

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5916--5959
22
2.0
22
95
0
79
25
36
4
34
1.76
12362--12406
21
2.1
22
84
12
58
68
8
8
13
1.38
15195--15369
35
5.1
35
86
4
239
42
17
21
18
1.89
15195--15368
67
2.5
68
89
2
251
41
17
21
18
1.90
20002--20045
20
2.1
22
84
16
58
68
9
9
13
1.40
20938--20969
9
3.6
9
95
0
55
75
9
6
9
1.20
24682--24728
20
2.3
20
85
0
67
29
36
12
21
1.91
38823--38869
19
2.4
19
76
13
51
4
17
6
72
1.22
42264--42312
22
2.2
23
82
10
66
42
18
8
30
1.79
44019--44044
13
2.0
13
100
0
52
46
0
7
46
1.31
45157--45196
11
3.5
11
90
6
62
82
0
5
12
0.82
46147--46245
6
16.0
6
71
10
65
71
3
20
5
1.18
46207--46244
13
2.8
13
82
17
51
73
0
18
7
1.06
46263--46302
18
2.3
18
91
4
64
67
5
17
10
1.37
46263--46312
17
2.9
17
82
8
66
64
4
22
10
1.41
46270--46344
18
4.5
17
71
23
54
57
2
28
12
1.48
47634--47694
10
6.1
10
74
12
54
32
13
24
29
1.93
47635--47695
20
3.0
20
83
9
79
32
13
26
27
1.93
49508--49533
13
2.0
13
100
0
52
46
0
7
46
1.31
50605--50655
24
2.2
22
83
13
59
29
3
29
37
1.75
55564--55614
24
2.2
23
83
13
61
37
29
3
29
1.75
58505--58530
13
2.0
13
100
0
52
46
0
7
46
1.31

Tables:   1

The End!