Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold265
Parameters: 2 7 7 80 10 50 1000
Length:  57611

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2378--2408
16
1.9
16
93
0
53
70
6
6
16
1.29
4642--4683
17
2.4
18
80
7
52
57
4
23
14
1.56
10924--10968
19
2.3
20
84
7
65
6
11
2
80
0.99
13182--13226
20
2.3
19
84
3
54
8
6
4
80
1.03
13527--13592
21
3.0
22
84
8
73
31
4
28
34
1.78
19076--19133
10
5.7
10
72
11
55
29
25
15
29
1.96
19076--19136
20
3.0
20
79
9
70
27
24
14
32
1.95
23065--23128
6
10.7
6
98
0
101
45
21
0
32
1.52
23135--23190
26
2.1
26
83
6
67
8
23
0
67
1.18
24060--24084
12
2.1
12
100
0
50
16
0
8
76
1.02
26698--26794
30
3.2
30
75
2
106
27
26
16
28
1.97
29957--30064
6
17.7
6
68
6
65
70
2
19
7
1.24
29978--30086
27
3.9
27
71
13
87
67
2
20
9
1.30
29961--30019
18
3.3
18
80
0
73
71
5
16
6
1.26
30025--30062
13
2.8
13
82
17
51
73
0
18
7
1.06
29943--30062
12
10.0
12
70
19
72
69
2
19
9
1.27
30068--30099
12
2.7
12
95
0
55
59
0
21
18
1.38
31750--31807
10
5.7
10
76
11
64
29
27
13
29
1.94
31750--31810
20
3.0
20
83
9
79
27
26
13
32
1.93
35372--35404
13
2.5
13
90
9
50
39
0
12
48
1.40
42924--42957
13
2.7
12
90
9
50
41
0
11
47
1.40
44406--44656
132
1.9
132
91
0
412
17
21
24
37
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47821--47877
29
2.0
29
87
12
84
15
14
8
61
1.56
50729--50774
20
2.3
20
82
14
51
78
6
6
8
1.10
50759--50818
10
5.6
10
77
16
50
76
3
15
5
1.08
50768--50827
23
2.6
23
81
7
68
76
1
16
5
1.04
50768--50827
11
5.3
11
76
20
61
76
1
16
5
1.04
51766--51857
17
5.5
16
72
14
53
69
3
19
7
1.27
51784--51920
38
3.4
39
75
11
109
70
2
18
8
1.26
51797--51902
6
17.7
6
69
10
65
71
2
18
6
1.20
51863--51900
13
2.8
13
82
17
51
73
0
18
7
1.06
51783--51900
11
10.0
12
70
21
63
70
2
18
8
1.25
51864--51914
21
2.4
21
74
6
50
74
1
17
5
1.11
51917--51979
33
1.9
33
84
12
85
55
6
25
12
1.60
53756--53809
20
2.7
20
82
0
63
24
20
18
37
1.94
53756--53829
30
2.5
30
86
8
98
21
20
18
39
1.93
53756--53820
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!