Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1569
Parameters: 2 7 7 80 10 50 1000
Length:  33308

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1206--1342
51
2.7
50
75
18
133
40
16
17
26
1.90
1218--1354
26
5.4
25
73
18
88
39
20
16
24
1.92
5071--5329
47
5.4
47
88
4
358
27
31
8
32
1.87
5085--5318
96
2.4
96
87
4
337
26
32
9
30
1.89
5076--5327
49
5.2
49
88
4
336
27
31
9
31
1.88
8658--9019
40
9.1
40
89
1
532
26
27
21
24
1.99
8658--9019
119
3.0
120
89
1
541
26
27
21
24
1.99
8658--9019
159
2.3
159
89
2
541
26
27
21
24
1.99
9073--9147
38
2.0
38
86
5
107
24
26
18
30
1.98
11192--11403
40
5.3
40
86
3
268
23
20
27
28
1.99
14047--14410
40
9.1
40
89
0
532
26
27
21
24
1.99
14464--14538
38
2.0
38
86
5
107
24
26
18
30
1.98
16580--16791
40
5.3
40
86
3
268
23
20
27
28
1.99
20596--20717
22
5.3
22
62
21
61
25
29
11
33
1.91
20568--20871
47
6.4
47
91
3
425
26
30
9
32
1.88
24203--24486
40
7.1
40
87
2
410
25
28
21
24
1.99
24540--24614
38
2.0
38
89
5
116
24
28
18
29
1.98
26658--26869
40
5.3
40
86
3
268
23
20
27
28
1.99
30647--30988
47
7.3
47
90
4
480
26
30
9
32
1.89
30647--30984
92
3.6
92
89
4
493
26
31
10
31
1.89
30668--30982
139
2.3
139
90
3
481
26
31
10
31
1.90

Tables:   1

The End!