Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2616
Parameters: 2 7 7 80 10 50 1000
Length:  57173

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
753--793
18
2.3
18
100
0
82
75
0
9
14
1.04
7398--7454
11
5.2
11
100
0
114
70
8
0
21
1.14
7495--7528
14
2.4
14
95
0
59
67
5
11
14
1.39
16081--16134
17
3.2
17
81
0
63
7
12
3
75
1.14
18681--18746
21
3.0
22
86
4
80
30
4
30
34
1.78
23257--23294
14
2.5
15
91
8
60
63
7
10
18
1.50
33550--33614
20
3.2
20
75
12
71
23
26
13
36
1.92
37940--37967
10
2.8
10
100
0
56
85
7
0
7
0.73
37962--37999
15
2.5
15
95
4
67
76
0
10
13
1.02
37961--38000
16
2.5
17
88
12
66
77
0
10
12
0.99
46573--46621
21
2.3
22
80
16
59
8
26
0
65
1.20
48038--48082
11
4.0
11
94
5
81
73
8
0
17
1.08
48041--48085
12
3.8
12
97
2
83
75
6
0
17
1.01
48126--48161
14
2.6
14
100
0
72
66
5
11
16
1.40

Tables:   1

The End!