Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1473
Parameters: 2 7 7 80 10 50 1000
Length:  53377

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
548--574
1
27.0
1
100
0
54
0
0
0
100
0.00
11650--11742
42
2.2
44
80
5
102
55
5
5
33
1.45
13205--13238
17
2.1
17
88
5
52
5
8
44
41
1.60
13385--13434
24
2.0
25
84
3
66
54
2
10
34
1.45
14094--14138
19
2.4
19
82
10
56
37
4
0
57
1.19
17258--17313
21
2.7
21
78
8
53
55
0
0
44
0.99
23110--23197
23
3.8
23
80
4
88
39
19
12
28
1.88
23379--23432
12
4.6
12
82
13
67
50
18
14
16
1.79
23379--23446
24
2.9
24
88
2
93
48
17
14
19
1.81
28463--28514
25
2.0
25
85
14
70
48
1
3
46
1.31
30124--30195
29
2.5
29
82
6
92
29
25
8
37
1.85
40759--40806
15
3.3
15
91
5
80
22
22
12
41
1.88
50818--50870
18
3.0
17
81
10
61
41
3
0
54
1.18
51225--51269
17
2.7
17
80
12
58
48
0
0
51
1.00

Tables:   1

The End!