Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold257
Parameters: 2 7 7 80 10 50 1000
Length:  47767

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83--144
30
2.1
30
88
11
92
27
14
11
46
1.78
1030--1054
2
12.5
2
100
0
50
0
48
0
52
1.00
1281--1317
16
2.5
15
87
12
51
0
18
0
81
0.70
4562--4599
11
3.5
11
82
10
51
0
13
0
86
0.56
5504--5562
29
2.0
30
83
9
77
64
3
5
27
1.30
5922--5969
22
2.2
22
82
10
55
31
0
8
60
1.26
10972--11019
23
2.0
25
88
11
75
39
0
0
60
0.97
10974--11030
22
2.5
22
80
8
62
40
0
0
59
0.97
10999--11111
58
1.9
58
80
7
131
37
3
2
56
1.30
12262--12290
15
1.9
15
100
0
58
20
0
20
58
1.39
12265--12298
15
2.3
15
89
0
50
23
0
23
52
1.47
15391--15415
5
5.0
5
100
0
50
80
0
20
0
0.72
21193--21252
31
1.9
31
83
6
77
40
10
21
28
1.85
21386--21424
18
2.1
20
86
13
57
41
0
0
58
0.98
21383--21427
17
2.5
19
79
20
60
44
0
0
55
0.99
24575--25445
441
2.0
441
99
0
1733
31
15
22
30
1.95
29034--29084
25
2.0
25
100
0
102
60
3
15
19
1.50
43837--43864
3
9.3
3
100
0
56
35
0
0
64
0.94
45444--45643
99
2.0
99
98
0
382
31
13
31
24
1.93

Tables:   1

The End!