Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3454
Parameters: 2 7 7 80 10 50 1000
Length:  40617

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6754--6938
79
2.3
81
83
7
227
24
22
27
24
2.00
6755--6938
40
4.6
40
82
9
207
25
22
27
24
2.00
6807--6971
79
2.1
79
83
6
201
26
21
27
24
1.99
8769--8814
14
3.2
15
75
9
51
41
13
13
32
1.82
15065--15098
13
2.8
13
86
13
54
0
41
0
58
0.98
15067--15103
19
2.1
17
90
10
56
0
37
0
62
0.96
15752--16038
27
10.7
27
82
2
258
43
19
17
19
1.89
16379--16505
28
4.4
28
73
9
110
25
22
22
30
1.99
18238--18288
25
2.0
25
100
0
102
37
19
31
11
1.88
18594--18627
11
3.1
11
91
0
50
17
20
20
41
1.91
24710--24894
79
2.3
81
84
7
236
24
22
27
25
2.00
24711--24894
40
4.6
40
83
9
216
24
22
27
25
2.00
24763--24927
79
2.1
79
84
6
210
26
21
27
25
1.99
32654--32838
79
2.3
81
84
7
236
24
22
27
25
2.00
32655--32838
40
4.6
40
83
9
216
24
22
27
25
2.00
32707--32871
79
2.1
79
84
6
210
26
21
27
25
1.99

Tables:   1

The End!