Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold761
Parameters: 2 7 7 80 10 50 1000
Length:  110815

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129--162
11
3.2
11
83
8
52
23
32
14
29
1.94
1423--1462
18
2.2
18
86
0
53
77
0
15
7
0.98
6621--6658
20
1.9
19
89
5
58
34
15
26
23
1.95
9017--9069
23
2.4
22
76
20
56
9
18
1
69
1.25
16619--16671
23
2.3
23
87
6
72
79
5
1
13
0.99
16619--16672
12
4.6
12
84
11
67
79
5
1
12
0.98
16713--16769
13
4.0
13
73
20
51
75
1
15
7
1.10
16718--16786
30
2.3
30
87
7
88
75
2
11
10
1.15
16718--16789
31
2.3
31
88
9
103
75
2
12
9
1.16
29977--30147
89
1.9
89
97
0
324
34
25
23
15
1.95
31967--32071
48
2.2
48
83
11
128
14
24
1
59
1.46
33080--33135
21
2.6
21
80
11
60
5
17
1
75
1.09
34654--34697
20
2.2
20
87
0
61
25
9
34
31
1.87
38102--38138
18
2.1
18
90
5
58
40
0
10
48
1.38
40806--40865
23
2.6
23
97
0
111
33
5
10
51
1.57
42677--42703
14
1.9
14
100
0
54
33
22
14
29
1.94
49319--49362
22
2.0
22
95
0
79
34
4
36
25
1.76
66230--66360
61
2.1
61
91
8
212
15
22
10
51
1.74
66342--66387
13
3.5
13
100
0
92
13
6
0
80
0.89
66685--66726
21
2.0
21
95
0
75
30
4
38
26
1.77
71053--71099
20
2.3
20
81
0
58
23
12
34
29
1.92
72762--72867
48
2.2
48
85
9
137
14
24
1
59
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75362--75406
11
4.2
11
83
13
58
4
13
0
82
0.82
75362--75406
22
2.1
21
91
4
72
4
13
0
82
0.82
76918--76963
20
2.4
19
85
3
56
23
15
32
28
1.95
77542--77569
4
7.0
4
100
0
56
25
0
0
75
0.81
83259--83283
12
2.1
12
100
0
50
24
28
0
48
1.52
84297--84366
11
5.6
12
75
18
54
15
7
4
72
1.22
84308--84366
12
4.5
13
72
17
50
16
5
5
72
1.20
85826--85872
20
2.3
20
88
0
67
25
17
31
25
1.97
91621--91679
24
2.3
26
88
8
86
13
10
0
76
1.02
91980--92045
21
3.0
22
86
4
80
30
4
30
34
1.78
94047--94093
20
2.3
20
88
0
67
25
17
31
25
1.97
97970--98013
22
2.0
22
95
0
79
25
36
4
34
1.76
98312--98362
14
3.6
14
78
21
61
72
0
5
21
1.05
98312--98350
17
2.3
17
86
0
51
71
0
5
23
1.05
98339--98365
12
2.2
12
100
0
54
66
0
11
22
1.22
98352--98479
67
1.9
66
96
1
238
46
12
24
17
1.82

Tables:   1

The End!