Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold693
Parameters: 2 7 7 80 10 50 1000
Length:  92958

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1972--2166
49
4.0
49
93
0
309
31
29
14
24
1.95
3420--3527
36
3.0
37
90
5
177
25
23
16
35
1.95
3491--3759
52
5.2
52
86
6
370
27
22
14
35
1.93
3593--3765
46
3.7
46
84
9
231
28
22
14
34
1.93
3491--3765
98
2.7
98
90
3
415
28
22
14
35
1.93
6970--7041
37
1.9
37
86
5
101
31
22
1
44
1.61
7169--7221
23
2.3
23
90
0
88
33
26
18
20
1.96
15543--15626
42
2.0
42
100
0
168
33
21
19
26
1.97
16265--16378
52
2.2
51
79
4
122
44
14
10
29
1.79
29425--29492
31
2.2
31
83
0
91
33
13
10
42
1.78
31418--31469
19
2.8
18
75
18
61
44
1
1
51
1.23
32365--32433
34
2.0
34
100
0
138
17
37
5
39
1.74
34693--34721
14
2.1
14
100
0
58
27
20
6
44
1.77
35268--35292
12
2.1
12
100
0
50
24
16
8
52
1.70
47844--47886
21
2.0
21
82
8
52
37
2
2
58
1.24
54948--55076
66
2.0
66
98
0
249
27
36
17
18
1.94
55195--55342
57
2.5
60
86
9
214
21
26
22
29
1.99
58430--58622
41
4.7
41
91
1
305
27
21
28
22
1.99
62694--62731
6
6.5
6
93
6
69
50
0
34
15
1.45
72279--72350
36
2.0
36
97
0
135
41
15
22
20
1.89
73834--73887
2
27.0
2
100
0
108
50
0
50
0
1.00
78301--78338
19
2.0
19
89
0
58
52
5
5
36
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78313--78395
29
2.8
29
87
3
112
51
3
3
40
1.37
84979--85013
18
1.9
18
88
0
52
74
2
2
20
1.08
85664--85694
7
4.4
7
100
0
62
48
0
12
38
1.42
86232--86261
5
6.0
5
96
0
51
3
20
36
40
1.69
86938--86999
29
2.1
29
84
0
79
56
6
12
24
1.60

Tables:   1

The End!