Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1521
Parameters: 2 7 7 80 10 50 1000
Length:  87657

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
614--730
54
2.1
55
81
7
141
25
21
12
40
1.89
1353--1407
20
2.8
20
85
0
74
27
18
29
25
1.98
10849--10912
30
2.1
30
82
5
76
21
20
18
39
1.93
18346--18387
19
2.2
20
91
4
68
33
35
2
28
1.70
19485--19518
15
2.3
15
89
0
50
35
29
32
2
1.73
23193--23255
21
3.0
21
88
2
81
34
31
4
28
1.78
31378--31411
13
2.5
14
95
4
61
79
0
0
20
0.73
31658--31710
23
2.4
22
76
20
56
69
1
18
9
1.25
35388--35422
18
1.9
18
88
11
54
57
0
20
22
1.41
42022--42075
23
2.2
25
78
15
60
62
3
22
11
1.43
48863--48888
13
2.0
13
100
0
52
46
7
0
46
1.31
49278--49316
20
1.9
21
89
5
62
38
12
25
23
1.90
58396--58442
20
2.3
20
81
0
58
29
34
12
23
1.92
61152--61216
20
3.3
19
73
16
51
38
16
21
23
1.93
63991--64053
33
1.9
33
84
12
85
12
25
6
55
1.60
64050--64136
27
3.1
27
80
9
97
11
18
1
68
1.25
64068--64110
17
2.4
18
84
7
61
13
18
0
67
1.23
64071--64136
29
2.4
27
87
10
89
12
18
0
69
1.18
64071--64163
12
8.1
12
67
21
56
12
19
1
66
1.30
65192--65253
22
2.9
21
76
7
61
8
8
4
79
1.07
65202--65239
12
3.2
12
85
14
53
13
2
7
76
1.11
66858--66922
20
3.3
19
73
16
51
38
16
21
23
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71984--72036
23
2.4
22
75
9
54
9
18
1
69
1.25
72029--72068
18
2.2
18
86
0
53
7
25
2
65
1.32
76795--76848
24
2.2
25
78
15
60
11
22
3
62
1.43

Tables:   1

The End!