Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold33
Parameters: 2 7 7 80 10 50 1000
Length:  69280

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1904--1948
20
2.2
20
88
7
65
51
8
6
33
1.59
1913--1958
20
2.4
19
85
7
65
43
13
13
30
1.81
7728--7756
10
2.7
11
89
10
51
68
10
0
20
1.18
11236--11351
6
19.0
6
68
10
74
72
1
18
6
1.16
11339--11373
18
1.9
18
88
11
54
57
0
20
22
1.41
17528--17603
34
2.2
34
90
0
116
42
11
9
36
1.74
19471--19521
18
2.8
18
88
5
68
7
15
0
76
1.00
24554--24856
47
6.4
47
92
1
489
32
8
29
28
1.88
24975--25049
37
2.0
37
84
5
98
24
17
30
28
1.97
28725--28766
21
2.1
21
87
12
63
19
23
0
57
1.41
28737--28807
18
3.8
18
74
20
65
16
25
1
56
1.49
33652--33721
34
2.1
33
94
2
122
44
12
8
34
1.73
35753--35811
11
5.2
11
75
20
50
42
0
35
22
1.54
37072--37123
21
2.5
21
87
0
77
30
3
13
51
1.58
47011--47066
12
4.6
12
86
4
85
76
7
1
14
1.07
47011--47066
25
2.3
25
90
3
87
76
7
1
14
1.07
47112--47162
15
3.3
15
73
10
57
80
1
9
7
0.98
47112--47182
32
2.2
32
87
9
101
76
2
9
11
1.13
58544--58699
27
5.7
27
78
6
145
27
28
16
28
1.97
58549--58700
54
2.8
55
80
4
182
26
27
16
28
1.97
64394--64440
11
3.9
12
86
8
69
74
8
2
14
1.15
64483--64522
14
2.7
15
84
3
55
67
0
10
22
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66107--66137
4
7.8
4
100
0
62
22
0
0
77
0.77

Tables:   1

The End!