Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2136
Parameters: 2 7 7 80 10 50 1000
Length:  58544

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--213
11
2.9
11
100
0
64
18
0
6
75
1.01
1186--1232
23
2.1
23
84
7
62
51
12
4
31
1.59
10551--10608
10
5.7
10
76
11
64
29
27
13
29
1.94
10551--10611
20
3.0
20
83
9
79
27
26
13
32
1.93
15887--15930
22
2.0
22
95
0
79
34
4
36
25
1.76
18555--18598
22
2.0
22
95
0
79
25
36
4
34
1.76
26861--26896
12
3.1
12
92
8
65
16
8
0
75
1.04
27212--27255
22
2.0
22
95
0
79
34
4
36
25
1.76
31475--31509
18
1.9
18
88
11
54
22
20
0
57
1.41
38230--38319
6
14.7
6
72
12
67
74
2
16
6
1.13
38234--38319
18
4.6
18
72
12
75
74
2
16
6
1.14
38323--38354
12
2.7
12
95
0
55
59
0
21
18
1.38
43515--43562
23
2.1
23
84
7
62
39
18
8
33
1.81
50952--50991
18
2.2
18
86
4
53
12
27
0
60
1.33
52042--52087
13
3.5
13
96
3
83
19
13
6
60
1.54
52042--52088
14
3.4
14
88
11
71
19
12
6
61
1.52
52132--52180
12
4.2
11
82
14
62
22
6
8
63
1.44
52132--52180
23
2.1
23
85
11
64
22
6
8
63
1.44
56403--56431
15
2.0
15
93
6
51
20
0
0
79
0.74

Tables:   1

The End!