Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold680
Parameters: 2 7 7 80 10 50 1000
Length:  49678

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
745--786
17
2.5
17
92
0
66
4
21
23
50
1.68
4820--4885
32
2.1
31
85
2
87
60
0
3
36
1.12
4947--5001
19
2.6
21
78
18
53
29
3
1
65
1.20
17873--17924
24
2.2
24
89
0
77
55
9
1
32
1.43
34899--34941
23
2.0
21
90
9
68
48
0
4
46
1.22
36408--36437
15
2.0
15
93
0
51
50
0
3
46
1.18
37247--37766
72
7.2
72
79
8
628
30
26
16
27
1.97
37212--37762
144
3.8
144
98
0
1061
29
25
17
26
1.97
40844--40885
17
2.5
17
92
0
66
4
21
23
50
1.68
41959--42016
30
1.9
30
82
6
73
53
1
13
31
1.50
44932--45007
31
2.4
32
80
10
95
59
1
2
36
1.20
48636--48680
18
2.5
19
78
10
58
35
13
26
24
1.92

Tables:   1

The End!