Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1287
Parameters: 2 7 7 80 10 50 1000
Length:  48566

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1925--1971
20
2.3
20
81
0
58
23
10
36
29
1.89
3637--3742
48
2.2
47
80
12
119
14
24
1
59
1.45
6322--6368
20
2.3
20
85
0
67
21
12
36
29
1.91
10936--10969
11
2.9
12
91
8
61
76
5
0
17
0.98
12005--12118
6
18.5
6
70
10
70
72
4
16
6
1.21
12073--12110
13
2.8
13
82
17
51
73
0
18
7
1.06
11991--12147
12
12.7
12
68
19
65
68
3
19
8
1.30
12029--12133
27
3.8
27
69
12
79
69
2
18
9
1.28
17470--17516
13
3.5
13
88
2
67
17
4
2
76
1.04
17465--17516
14
3.9
14
85
10
72
21
7
1
69
1.24
18925--19011
41
2.1
41
93
0
156
39
17
14
28
1.89
20969--21002
11
3.0
11
91
8
59
73
8
0
17
1.08
20972--21003
12
2.7
12
100
0
64
81
6
0
12
0.87
21044--21098
15
3.6
15
95
2
92
60
5
12
21
1.53
21046--21098
16
3.4
16
92
2
81
62
5
11
20
1.49
42842--42879
17
2.2
18
85
4
51
63
2
23
10
1.39
46506--46537
14
2.4
13
94
5
55
18
9
0
71
1.12

Tables:   1

The End!