Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1555
Parameters: 2 7 7 80 10 50 1000
Length:  43673

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4877--5145
27
10.1
27
85
5
341
17
18
19
44
1.87
4882--5143
133
2.0
133
88
2
391
17
17
19
45
1.86
5140--5197
27
2.2
27
84
6
75
18
18
18
43
1.89
5925--5949
13
1.9
13
100
0
50
48
0
52
0
1.00
6072--6096
12
2.1
12
100
0
50
76
0
24
0
0.80
18013--18215
29
7.0
29
78
3
192
23
28
12
36
1.91
18025--18335
87
3.6
87
82
4
315
24
25
11
38
1.89
18013--18210
58
3.4
58
78
6
220
22
28
12
36
1.91
18113--18336
29
7.7
29
75
8
145
24
24
12
38
1.89
18499--18573
38
2.0
37
92
2
123
33
8
21
37
1.83
19824--19905
23
3.7
23
74
9
71
17
4
31
46
1.69
25229--25267
20
2.0
20
94
0
69
48
0
2
48
1.15
25289--25374
33
2.7
32
76
16
88
46
17
8
27
1.76
25355--25397
14
3.2
13
84
12
52
39
16
6
37
1.75
29997--30371
186
2.0
186
95
0
669
41
14
15
28
1.86
37645--37773
23
5.7
23
82
1
145
13
2
34
49
1.55
37640--37773
46
3.0
45
83
7
166
13
2
35
49
1.55
37645--37773
69
1.9
67
85
3
177
13
2
34
49
1.55
41286--41346
30
2.1
28
84
6
77
49
0
14
36
1.44
42591--42717
23
5.7
23
80
7
127
15
2
33
48
1.58
42591--42714
65
1.9
66
88
1
187
16
2
33
47
1.59

Tables:   1

The End!