Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3271
Parameters: 2 7 7 80 10 50 1000
Length:  41662

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3113--3149
13
2.8
13
100
0
74
16
0
5
78
0.93
4738--4828
45
2.0
45
91
4
148
36
19
19
24
1.95
6356--6402
23
2.1
23
84
7
62
51
12
4
31
1.59
6932--7025
46
2.0
46
93
4
163
35
22
18
24
1.96
13958--14005
24
2.0
25
91
4
80
18
16
12
52
1.75
13343--14565
617
2.0
616
97
0
2293
22
17
17
42
1.89
15219--15247
11
2.7
11
94
5
51
75
0
0
24
0.80
16228--16274
23
2.1
23
84
7
62
51
12
4
31
1.59
16804--16897
46
2.0
46
93
4
163
35
22
18
24
1.96
18415--18461
23
2.1
23
84
7
62
51
12
4
31
1.59
22283--22337
15
3.8
14
80
7
65
74
1
21
1
1.01
27123--27216
46
2.0
46
93
4
163
35
22
18
24
1.96
29255--29372
55
2.1
55
84
6
159
25
22
13
38
1.90
29996--30050
20
2.8
20
88
0
83
29
16
29
25
1.97
30611--30657
23
2.1
23
84
7
62
51
12
4
31
1.59
36300--36353
24
2.2
25
78
15
60
11
22
3
62
1.43
38602--38628
14
1.9
14
100
0
54
14
7
7
70
1.32
38633--38667
12
2.7
13
91
8
54
17
5
0
77
0.96
38631--38668
13
2.8
14
84
4
51
18
5
0
76
0.97

Tables:   1

The End!