Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3116_ERROPOS142557
Parameters: 2 7 7 80 10 50 1000
Length:  142557

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9033--9062
11
2.7
11
89
0
51
40
10
3
46
1.54
9536--9642
11
10.4
11
70
23
56
60
0
2
35
1.17
9509--9692
41
4.5
41
89
6
257
61
0
2
35
1.14
9509--9693
80
2.2
82
89
7
286
61
0
2
35
1.15
9543--9694
19
7.6
19
66
17
85
61
0
2
35
1.15
11067--11125
23
2.5
25
78
13
70
35
5
3
55
1.38
11089--11213
24
5.3
24
76
13
100
40
8
1
50
1.41
11090--11194
23
4.5
23
74
10
81
40
8
1
49
1.44
11198--11280
24
3.2
24
67
26
62
42
1
6
50
1.34
14479--14948
114
4.1
114
82
3
570
31
19
23
25
1.98
14536--14966
227
1.9
228
89
1
668
32
19
23
25
1.97
14895--15040
74
2.0
73
82
6
179
30
17
23
28
1.97
14753--15154
188
2.1
188
88
0
590
31
17
22
27
1.97
14935--15284
113
3.1
112
77
6
375
30
17
23
28
1.97
15301--15368
17
3.7
18
78
19
70
35
0
7
57
1.27
15310--15361
21
2.5
21
79
14
72
32
0
7
59
1.26
15291--15400
38
2.8
40
74
13
127
38
0
10
50
1.37
23545--23576
15
2.1
16
94
5
57
21
0
18
59
1.38
30144--30196
26
2.0
26
85
0
70
26
7
28
37
1.83
30810--30858
20
2.4
21
82
3
64
24
4
10
61
1.45
41251--41285
18
1.9
18
94
0
61
31
14
28
25
1.95
51175--51228
7
7.7
7
78
17
51
27
0
0
72
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51142--51220
15
5.4
14
75
20
72
27
1
2
68
1.10
51171--51242
34
2.1
35
84
7
94
30
0
1
68
0.99
52205--52285
31
2.5
31
82
15
94
49
16
0
34
1.46
63812--63919
54
2.0
54
85
3
146
42
10
7
39
1.67
65168--65208
15
2.9
15
89
7
59
29
0
31
39
1.57
66217--66302
14
6.1
14
72
16
54
37
37
0
25
1.56
66304--66345
15
2.9
15
92
3
68
38
30
0
30
1.58
71488--71540
24
2.3
23
81
15
56
11
15
5
67
1.38
80201--80236
18
1.9
19
88
5
56
58
8
0
33
1.28
80231--80278
7
6.6
7
76
9
51
75
0
0
25
0.81
80219--80278
22
2.7
21
87
7
75
70
1
0
28
0.97
80221--80276
14
3.8
14
85
7
67
73
1
0
25
0.93
90383--90417
18
1.9
18
94
0
61
25
28
14
31
1.95
97290--97361
31
2.3
31
90
0
108
29
30
26
13
1.94
106706--106738
15
2.1
16
94
5
59
63
0
0
36
0.95
108744--108785
17
2.7
15
82
13
57
59
4
0
35
1.19
116851--116884
17
1.9
18
88
5
52
73
0
2
23
0.97
119873--119902
12
2.6
11
90
10
51
70
0
3
26
1.03
120208--120303
31
3.1
31
95
3
174
45
13
9
31
1.75
124865--124902
18
2.1
18
90
9
60
0
5
10
84
0.77
124855--124898
9
4.7
9
85
5
52
0
9
13
77
0.99
125459--125554
31
3.1
31
95
3
174
45
13
9
31
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129486--129516
15
2.1
15
100
0
62
22
32
6
38
1.80
133844--133874
15
2.1
15
93
0
53
22
29
6
41
1.78
134080--134111
16
2.0
16
100
0
64
12
0
31
56
1.37
138538--138581
18
2.4
18
84
0
61
11
6
45
36
1.67

Tables:   1

The End!