Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1000
Parameters: 2 7 7 80 10 50 1000
Length:  81131

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43340--43405
24
2.8
24
79
9
80
15
18
39
27
1.90
44174--44218
22
2.0
22
86
0
63
20
13
13
53
1.72
47187--47248
28
2.2
28
82
5
72
30
6
0
62
1.20
48459--48508
25
2.0
25
92
0
82
4
36
4
56
1.37
50774--50806
12
2.8
12
90
4
50
42
33
18
6
1.75
51406--51456
19
2.5
21
81
12
70
31
33
9
25
1.88
54502--54526
13
1.9
13
100
0
50
48
0
16
36
1.46
57356--57426
35
2.0
35
94
0
124
39
15
11
33
1.83
58134--58165
2
16.0
2
100
0
64
50
0
0
50
1.00
61430--61477
24
2.0
24
100
0
96
25
25
25
25
2.00
62550--62622
25
2.7
26
74
20
69
57
2
0
39
1.13
62618--62658
17
2.4
17
87
4
55
73
7
2
17
1.17
62618--62669
17
2.9
18
74
8
52
73
5
1
19
1.14
63113--63173
23
2.7
23
80
7
70
59
3
0
37
1.14
63112--63171
24
2.6
23
79
10
77
60
3
0
36
1.14
63160--63244
24
3.7
22
79
11
91
72
5
0
21
1.05
63694--63733
21
2.0
20
95
5
71
65
0
2
32
1.06
72688--72755
31
2.2
31
89
10
104
39
8
23
27
1.84

Tables:   1

The End!