Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1126
Parameters: 2 7 7 80 10 50 1000
Length:  70468

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10863--11046
40
4.7
39
83
8
221
25
27
22
24
2.00
10863--11044
78
2.3
81
83
6
230
25
28
21
24
1.99
15165--15437
44
6.2
44
71
13
159
29
17
23
30
1.97
15183--15479
44
6.8
42
69
14
147
30
16
21
30
1.96
15334--15833
162
3.0
162
88
5
725
31
17
22
28
1.97
15697--15794
44
2.2
44
78
7
101
29
19
20
30
1.97
15500--15906
173
2.3
173
88
3
523
31
18
23
26
1.97
26037--26090
25
2.2
25
83
12
67
55
0
3
40
1.17
40096--40133
18
2.2
17
86
9
51
42
15
2
39
1.61
61772--62102
47
7.1
47
95
1
567
31
9
30
28
1.88
64149--64222
29
2.6
29
84
4
96
25
14
32
27
1.95
64533--64728
80
2.5
79
82
5
216
26
22
27
23
2.00
64533--64728
40
4.9
41
79
6
190
26
22
27
23
2.00
64571--64727
79
2.0
80
84
3
210
27
21
26
24
1.99
68075--68353
46
6.0
46
88
7
397
32
7
29
30
1.86
68075--68353
93
3.0
92
89
5
420
32
7
29
30
1.86

Tables:   1

The End!