Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3708
Parameters: 2 7 7 80 10 50 1000
Length:  64088

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11563--11890
44
7.6
44
72
10
182
31
21
20
26
1.98
11731--11930
87
2.3
88
81
6
217
30
21
21
27
1.98
11611--12052
218
2.0
214
80
7
475
30
20
22
26
1.98
13418--13458
3
13.7
3
100
0
82
31
0
0
68
0.90
22734--22798
22
3.0
22
80
11
71
38
4
1
55
1.30
29733--29853
42
2.8
43
85
3
147
32
26
17
23
1.97
32833--32884
24
2.2
24
85
0
68
51
9
5
32
1.58
33570--33641
35
2.1
35
97
0
135
31
11
5
51
1.60
33947--33990
22
2.0
23
90
4
72
65
0
0
34
0.93
34550--34601
26
2.0
26
84
0
68
32
0
1
65
1.04
34544--34599
25
2.3
23
84
6
67
32
0
1
66
1.03
35831--35863
17
1.9
17
93
0
57
24
24
6
45
1.75
39340--39372
17
1.9
17
93
0
57
27
24
6
42
1.78
43921--44148
113
2.0
113
99
0
447
31
14
17
35
1.90
44738--44784
21
2.2
21
92
0
76
29
38
10
21
1.87
45635--45679
23
2.0
22
87
12
65
62
0
4
33
1.15
46612--46654
12
3.5
12
87
6
59
76
0
6
16
0.99
46612--46652
19
2.2
19
91
4
66
75
0
7
17
1.02
46612--46654
6
7.0
6
86
5
50
76
0
6
16
0.99
62668--62786
54
2.2
55
89
3
177
45
11
14
28
1.80
62682--62827
54
2.8
50
81
11
159
40
13
15
30
1.85

Tables:   1

The End!