Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2446
Parameters: 2 7 7 80 10 50 1000
Length:  60194

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3787--3820
14
2.3
15
90
5
52
70
0
8
20
1.13
4894--4938
18
2.6
18
82
6
58
57
2
31
8
1.41
7035--7077
22
2.0
21
86
4
59
46
6
20
25
1.76
7822--7863
11
3.6
11
84
12
57
80
4
0
14
0.86
24329--24370
16
2.6
16
96
0
75
19
11
4
64
1.44
24410--24447
20
1.9
20
94
0
67
10
2
2
84
0.83
26994--27023
13
2.3
13
94
0
51
43
6
0
50
1.28
42965--42998
6
5.7
6
96
0
50
44
23
0
32
1.54
42987--43040
25
2.2
25
86
0
72
12
25
0
61
1.32
43006--43048
21
2.0
22
86
4
61
9
25
0
65
1.22
43851--43914
28
2.4
28
89
10
98
10
7
3
78
1.07
43961--44002
12
3.7
12
93
6
70
11
0
4
83
0.79
44258--44335
21
3.4
23
74
8
70
26
2
30
39
1.70
44294--44355
21
2.9
21
82
2
79
30
3
32
33
1.74
45656--45755
30
3.2
30
69
12
78
28
16
27
29
1.97
49799--49850
11
4.6
12
79
13
56
76
3
7
11
1.12
52260--52392
66
2.0
66
100
0
266
25
10
28
35
1.89
53548--53576
12
2.3
13
94
5
51
24
0
0
75
0.80
55936--55991
12
4.7
12
74
14
53
64
0
23
12
1.27

Tables:   1

The End!