Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1117
Parameters: 2 7 7 80 10 50 1000
Length:  55023

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--110
13
2.7
13
95
0
61
17
5
2
74
1.14
4495--4533
14
2.9
14
96
3
71
20
15
0
64
1.30
15434--15484
15
3.5
15
81
5
68
74
1
21
1
1.02
17859--17905
23
2.1
23
84
7
62
51
12
4
31
1.59
22911--22976
21
3.0
22
84
4
71
30
3
30
36
1.73
24746--24799
15
3.7
15
92
5
92
20
12
5
61
1.52
24746--24796
14
3.6
14
97
2
93
19
11
5
62
1.49
24842--24879
9
3.7
10
86
13
51
13
0
7
78
0.94
24841--24883
11
4.0
11
85
14
63
16
0
9
74
1.06
24840--24880
12
3.7
12
81
18
61
12
0
7
80
0.90
25850--25896
23
2.1
23
84
7
62
51
12
4
31
1.59
29478--29509
12
2.6
12
95
5
55
65
3
6
25
1.31
31700--31745
20
2.3
20
84
0
56
23
19
17
39
1.92
31692--31765
30
2.5
30
84
8
80
22
20
18
37
1.94
38904--38951
12
4.0
12
91
0
69
68
12
6
12
1.37
38990--39039
13
3.9
13
87
12
77
64
0
12
24
1.27
41188--41231
22
2.0
22
95
0
79
25
36
4
34
1.76
41547--41601
18
2.8
19
82
15
60
69
1
21
7
1.23
41568--41611
20
2.1
21
84
12
56
61
2
29
6
1.34
49711--49788
39
2.0
40
90
7
124
35
8
42
12
1.75

Tables:   1

The End!