Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2622
Parameters: 2 7 7 80 10 50 1000
Length:  44888

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--903
40
8.7
40
89
2
509
22
27
19
31
1.98
560--903
119
2.9
118
89
3
514
22
27
19
31
1.98
560--904
79
4.4
79
94
2
543
22
27
19
31
1.98
2173--2598
47
9.1
47
95
0
701
28
30
9
31
1.88
6239--6281
11
4.0
11
81
6
52
27
4
2
65
1.25
9574--10101
47
10.9
49
90
4
828
32
8
28
30
1.87
9574--10101
145
3.6
143
92
3
858
32
8
28
30
1.87
11141--11238
48
2.0
48
100
0
196
42
12
12
32
1.79
13353--13595
50
4.8
50
86
0
315
27
22
27
21
1.99
20124--20150
13
2.1
13
100
0
54
29
0
7
62
1.22
20257--20431
50
3.5
49
85
4
206
28
21
29
21
1.99
26902--26928
13
2.1
13
100
0
54
29
0
7
62
1.22
27032--27209
50
3.5
50
87
3
232
26
21
29
21
1.99
28799--28827
10
2.7
11
89
10
51
17
6
0
75
1.01
28801--28826
10
2.6
10
100
0
52
15
7
0
76
0.99
35501--35542
12
3.5
12
83
0
57
16
26
30
26
1.97
36325--36388
20
3.2
20
70
16
69
35
12
32
18
1.89
36296--36485
40
4.8
40
88
0
245
34
18
27
19
1.95
43116--43208
35
2.6
36
91
3
154
25
16
19
38
1.92
43985--44035
21
2.4
21
83
6
68
39
25
3
31
1.74

Tables:   1

The End!