Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3230
Parameters: 2 7 7 80 10 50 1000
Length:  42956

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2426--2531
48
2.2
48
85
9
137
14
24
1
59
1.45
3536--3568
9
3.8
9
84
8
50
3
9
0
87
0.63
3526--3587
21
3.0
20
83
6
79
4
12
1
80
0.94
3533--3568
8
4.5
8
90
10
56
2
8
0
88
0.59
5099--5145
20
2.3
20
85
0
67
21
12
36
29
1.91
9323--9369
20
2.3
20
81
0
58
23
12
34
29
1.92
13496--13613
55
2.1
55
84
6
159
25
22
13
38
1.90
17148--17200
23
2.4
22
76
20
56
9
18
1
69
1.25
20970--21010
15
2.7
16
74
11
50
7
26
0
65
1.18
22213--22242
11
2.7
11
100
0
60
13
0
6
80
0.91
24250--24296
20
2.3
20
92
0
76
31
17
29
21
1.96
27581--27658
21
3.4
23
74
8
70
26
2
30
39
1.70
27617--27683
21
3.1
21
82
4
80
29
2
32
34
1.73
28996--29092
30
3.2
30
72
8
99
28
16
26
27
1.97
33184--33225
12
3.5
12
90
0
66
78
2
7
11
1.04
33280--33321
16
2.6
16
82
10
50
66
2
16
14
1.35
35647--35760
55
2.0
56
94
5
203
23
12
28
35
1.91
36911--36939
12
2.3
13
94
5
51
24
0
0
75
0.80
40695--40723
12
2.3
13
94
5
51
24
0
0
75
0.80

Tables:   1

The End!