Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2313
Parameters: 2 7 7 80 10 50 1000
Length:  40040

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3817--3868
26
2.0
26
96
0
95
13
23
34
28
1.92
3741--3962
102
2.2
104
91
3
360
18
18
31
31
1.95
3881--4032
71
2.1
72
92
1
252
23
17
29
30
1.97
7494--7523
6
5.0
6
100
0
60
83
16
0
0
0.65
7857--7969
54
2.1
54
100
0
226
28
19
7
45
1.76
8844--8878
14
2.5
14
95
0
61
45
17
22
14
1.84
8865--9164
163
1.8
163
91
1
494
28
22
24
25
1.99
9004--9230
84
2.6
86
78
10
239
27
21
25
25
1.99
9004--9249
44
5.7
43
74
12
184
28
20
26
25
1.99
10922--10982
26
2.2
27
80
11
70
27
4
6
60
1.42
11155--11187
15
2.2
15
94
0
57
24
0
12
63
1.28
11462--11659
98
2.0
99
93
1
335
29
9
23
37
1.87
15612--15639
11
2.5
11
100
0
56
14
28
0
57
1.38
18320--18358
20
1.9
21
85
15
55
46
0
7
46
1.31
22232--22312
40
2.0
40
100
0
162
27
14
9
48
1.76

Tables:   1

The End!