Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1131
Parameters: 2 7 7 80 10 50 1000
Length:  37282

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
214--239
6
4.3
6
100
0
52
15
0
0
84
0.62
12547--12591
22
2.0
23
86
4
65
22
2
4
71
1.15
14283--14328
20
2.3
20
84
0
56
23
19
17
39
1.92
14275--14348
30
2.5
30
84
8
80
22
20
18
37
1.94
15896--15929
13
2.6
13
86
13
52
79
5
2
11
1.02
15897--15929
12
2.7
12
95
4
57
78
6
3
12
1.04
15898--15939
11
3.6
11
87
12
50
76
7
4
11
1.15
16996--17103
6
17.7
6
68
6
65
70
3
19
6
1.25
17000--17058
18
3.3
18
80
0
73
71
6
16
5
1.26
17064--17101
13
2.8
13
82
17
51
73
0
18
7
1.06
17065--17115
21
2.4
21
74
6
50
74
1
17
5
1.11
17017--17121
27
3.8
27
71
9
77
68
2
20
8
1.29
17118--17180
33
1.9
33
84
12
85
53
6
26
12
1.62
18955--19008
20
2.7
20
82
0
63
24
20
18
37
1.94
18955--19028
30
2.5
30
86
8
98
21
20
18
39
1.93
18955--19019
20
3.2
20
71
16
53
23
21
16
38
1.93

Tables:   1

The End!