Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2699
Parameters: 2 7 7 80 10 50 1000
Length:  92263

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3884--4001
19
6.3
19
71
12
66
37
0
5
56
1.27
3932--4001
19
3.6
19
83
7
88
35
1
5
57
1.32
5983--6008
5
5.2
5
100
0
52
0
23
19
57
1.40
9024--9051
13
2.2
13
100
0
56
53
14
0
32
1.41
9485--9524
20
2.0
20
90
0
62
47
12
12
27
1.77
19490--19537
23
2.1
23
84
0
60
43
8
4
43
1.53
20476--20501
7
3.7
7
100
0
52
88
11
0
0
0.52
24196--24245
25
2.0
25
84
7
66
20
0
32
48
1.50
35338--35370
17
1.9
17
88
11
50
51
0
3
45
1.16
35394--35997
328
1.8
329
81
5
741
31
22
19
25
1.98
39174--39213
20
2.0
20
85
0
53
35
20
0
45
1.51
45141--45191
23
2.2
23
89
0
75
41
19
9
29
1.84
47247--47434
61
3.1
60
68
19
183
43
2
6
47
1.42
47236--47466
120
1.9
120
97
0
435
42
2
6
48
1.42
47419--47460
15
2.9
15
82
10
52
47
0
0
52
1.00
47403--47719
157
2.0
157
95
0
571
47
5
3
44
1.42
47572--47606
18
2.0
17
88
5
52
45
0
0
54
0.99
47572--47629
16
3.6
16
78
21
52
44
0
1
53
1.10
47842--47877
16
2.2
16
100
0
72
38
36
0
25
1.56
55617--55651
17
2.1
17
94
5
63
77
0
11
11
1.00
63406--63470
17
3.9
16
73
15
51
66
0
1
32
1.01
63409--63470
23
2.7
24
71
16
60
64
0
1
33
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63403--63479
33
2.3
33
80
8
86
64
2
1
31
1.15
64479--64516
20
1.9
20
88
0
58
47
15
5
31
1.68
66961--67030
12
5.8
12
77
11
54
38
17
14
30
1.89
66954--67025
24
3.0
24
87
4
110
40
16
12
30
1.86
66937--67025
47
1.9
46
86
2
124
40
16
11
31
1.84
74879--74935
29
2.0
29
100
0
114
22
14
14
49
1.79
78161--78190
11
2.7
11
89
0
51
26
10
6
56
1.57
82894--82936
3
14.3
3
100
0
86
67
0
0
32
0.91
83311--83359
18
2.7
18
84
6
64
40
30
14
14
1.85
83311--83393
17
4.8
17
77
11
62
36
30
16
16
1.92
83382--83445
29
2.2
30
85
2
85
28
29
25
17
1.97

Tables:   1

The End!