Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold749
Parameters: 2 7 7 80 10 50 1000
Length:  68331

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
960--1006
21
2.4
21
86
10
64
4
19
4
72
1.18
16974--17020
23
2.1
23
84
7
62
51
12
4
31
1.59
23955--24051
30
3.2
30
75
2
106
28
26
15
28
1.96
26685--26755
37
1.9
37
86
11
101
76
2
18
2
1.04
26695--26744
6
8.2
6
83
14
50
76
2
20
2
0.99
26805--26835
12
2.6
12
100
0
62
45
12
16
25
1.83
29012--29107
30
3.2
30
75
4
106
28
27
15
29
1.96
32068--32119
23
2.3
22
75
21
54
11
21
1
65
1.34
39782--39843
10
5.4
11
75
22
56
3
16
3
77
1.03
39836--39862
12
2.2
12
100
0
54
14
0
7
77
0.97
42799--42845
20
2.3
20
81
0
58
23
12
34
29
1.92
43244--43282
20
1.9
21
89
5
62
23
28
12
35
1.91
43672--43697
13
2.0
13
100
0
52
46
0
7
46
1.31
45801--45898
6
16.0
6
69
12
65
72
2
20
5
1.14
45821--45854
17
2.0
17
94
0
59
79
5
14
0
0.91
45860--45897
13
2.8
13
82
17
51
73
0
18
7
1.06
45916--45955
18
2.3
18
82
4
55
65
5
20
10
1.42
45916--45965
17
2.9
17
77
8
57
62
4
24
10
1.44
45902--45997
36
2.8
34
79
14
92
56
4
26
13
1.55
45923--45997
16
4.6
16
72
26
52
56
2
29
12
1.49
47230--47268
20
1.9
21
89
5
62
23
28
12
35
1.91
47657--47682
13
2.0
13
100
0
52
46
0
7
46
1.31
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50746--50851
48
2.2
47
85
9
135
59
1
24
14
1.45
52521--52567
20
2.3
20
85
0
67
29
36
12
21
1.91
56247--56278
11
2.9
11
100
0
64
75
6
0
18
1.01

Tables:   1

The End!