Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2583
Parameters: 2 7 7 80 10 50 1000
Length:  61776

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7550--7582
15
2.2
15
89
10
50
78
0
0
21
0.75
12329--12512
79
2.3
81
82
8
218
26
27
22
24
2.00
12329--12512
40
4.7
40
83
7
216
26
27
22
24
2.00
22971--23014
13
3.7
12
88
8
63
11
4
6
77
1.11
22970--23014
12
3.6
13
88
8
67
11
4
6
77
1.09
25588--25705
55
2.1
55
84
6
159
25
22
13
38
1.91
26321--26375
20
2.8
20
94
0
92
27
16
29
27
1.97
29434--29473
17
2.5
16
88
8
55
57
5
12
25
1.55
31481--31534
20
2.5
20
80
20
56
68
1
20
9
1.27
31489--31529
19
2.0
19
86
13
55
73
2
19
4
1.13
36059--36113
20
2.8
20
91
0
92
29
29
14
27
1.95
41307--41362
12
4.7
12
74
14
53
64
0
23
12
1.27
48571--48783
40
5.6
40
75
19
197
25
27
22
24
2.00
48596--48659
30
2.1
31
97
2
121
29
25
17
28
1.97
56461--56671
39
5.7
38
75
18
162
24
27
22
25
2.00
56489--56547
31
1.9
30
96
3
109
27
27
20
25
1.99
56517--56672
38
4.0
38
76
12
131
25
27
21
25
1.99

Tables:   1

The End!