Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold5033.1
Parameters: 2 7 7 80 10 50 1000
Length:  35739

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--273
74
2.0
74
94
0
260
37
8
12
41
1.75
3152--3256
54
1.9
54
98
0
201
38
13
6
41
1.70
7225--7359
68
2.0
68
98
0
261
45
16
11
25
1.81
12513--12546
18
1.9
17
88
5
50
73
0
0
26
0.83
13794--13902
53
2.0
54
96
3
202
28
15
11
44
1.80
17447--17503
17
3.4
17
73
9
62
43
3
5
47
1.43
17436--17503
34
2.0
34
97
0
127
45
5
5
42
1.52
17569--17624
24
2.4
24
79
8
71
10
28
1
58
1.41
20628--20755
46
2.8
47
84
5
154
23
23
11
41
1.87
20673--20762
46
2.0
46
97
0
171
25
23
12
38
1.89
22181--22351
32
5.2
33
80
3
159
33
21
10
33
1.88
22344--22410
29
2.3
29
97
0
125
22
31
11
34
1.90
23187--23229
20
2.0
22
86
8
63
30
18
0
51
1.47
24385--24435
19
2.8
18
85
5
66
11
7
3
76
1.13
24606--24920
44
7.2
44
88
2
427
30
13
28
27
1.94
24967--25059
45
2.1
45
85
4
125
31
13
27
26
1.94
25403--25493
19
4.9
19
89
8
152
36
10
16
36
1.84
25424--25479
18
3.5
15
81
18
60
37
10
16
35
1.83
25403--25500
35
2.7
37
86
12
141
36
10
17
35
1.84
25686--25947
130
2.0
130
97
0
497
14
18
6
59
1.56
26033--26177
73
2.0
73
94
0
254
33
11
22
33
1.89
26619--26661
13
3.2
13
86
3
50
18
0
4
76
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26619--26663
23
2.0
23
86
4
65
20
0
4
75
0.97
26615--26648
9
3.8
9
85
14
52
17
0
2
79
0.86
29796--29827
11
2.9
11
100
0
64
34
0
18
46
1.49
34005--34050
8
5.9
8
77
12
51
84
0
13
2
0.71
34004--34059
9
6.6
9
73
19
57
85
0
12
1
0.67
34014--34059
11
4.2
11
84
15
60
86
0
10
2
0.64
35005--35736
84
8.7
84
93
2
1206
29
23
22
25
1.99

Tables:   1

The End!