Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: A12
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 103038859
ACGTcount: A:0.31, C:0.16, G:0.16, T:0.31
Warning! 4950000 characters in sequence are not A, C, G, or T
File 121 of 320
Found at i:39667537 original size:42 final size:42
Alignment explanation
Indices: 39667478--39667562 Score: 161
Period size: 42 Copynumber: 2.0 Consensus size: 42
39667468 AGATGAAAGT
*
39667478 TTAGATTGTGATATACTTATTCATGTTTGTTTGGCCCTTATA
1 TTAGACTGTGATATACTTATTCATGTTTGTTTGGCCCTTATA
39667520 TTAGACTGTGATATACTTATTCATGTTTGTTTGGCCCTTATA
1 TTAGACTGTGATATACTTATTCATGTTTGTTTGGCCCTTATA
39667562 T
1 T
39667563 GATATTATGT
Statistics
Matches: 42, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
42 42 1.00
ACGTcount: A:0.21, C:0.13, G:0.16, T:0.49
Consensus pattern (42 bp):
TTAGACTGTGATATACTTATTCATGTTTGTTTGGCCCTTATA
Found at i:39670259 original size:27 final size:27
Alignment explanation
Indices: 39670221--39670280 Score: 111
Period size: 27 Copynumber: 2.2 Consensus size: 27
39670211 TAATGCTTGT
*
39670221 TGTTACATGAATTGATTGTTAAATTAC
1 TGTTACATGAATTGAGTGTTAAATTAC
39670248 TGTTACATGAATTGAGTGTTAAATTAC
1 TGTTACATGAATTGAGTGTTAAATTAC
39670275 TGTTAC
1 TGTTAC
39670281 CTGGGTTGTA
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
27 32 1.00
ACGTcount: A:0.32, C:0.08, G:0.17, T:0.43
Consensus pattern (27 bp):
TGTTACATGAATTGAGTGTTAAATTAC
Found at i:39670656 original size:50 final size:50
Alignment explanation
Indices: 39670529--39670726 Score: 227
Period size: 50 Copynumber: 4.0 Consensus size: 50
39670519 ATCTCTTGTG
* * * *
39670529 AGGTCACATTTGTAGTACTAAGTGCAGGCTACTATGCGTACCCGATAACTT
1 AGGTCACATGTGTAGTACTAAGTGCAGGCTACTACGTGTACCAGATAA-TT
* * * ** *
39670580 CGATCACGTGTGTAGTACTAAGTGCAGGCTACTACGTGTATTAGATGATT
1 AGGTCACATGTGTAGTACTAAGTGCAGGCTACTACGTGTACCAGATAATT
* *
39670630 AGGTCACGTGTGTAGTACTAAGTGCAGGCTACTACGTGTACCGGATAATT
1 AGGTCACATGTGTAGTACTAAGTGCAGGCTACTACGTGTACCAGATAATT
** * * *
39670680 -GGTTGCATGTGTAGTACTAAGTGCAGGCTAGTATGCGTACCAGATAA
1 AGGTCACATGTGTAGTACTAAGTGCAGGCTACTACGTGTACCAGATAA
39670727 CTTTGGCTAT
Statistics
Matches: 124, Mismatches: 23, Indels: 2
0.83 0.15 0.01
Matches are distributed among these distances:
49 40 0.32
50 46 0.37
51 38 0.31
ACGTcount: A:0.27, C:0.18, G:0.26, T:0.29
Consensus pattern (50 bp):
AGGTCACATGTGTAGTACTAAGTGCAGGCTACTACGTGTACCAGATAATT
Found at i:39677383 original size:20 final size:20
Alignment explanation
Indices: 39677345--39677385 Score: 57
Period size: 20 Copynumber: 2.0 Consensus size: 20
39677335 TTTATCCAAA
39677345 AACATCTTATTACAGTCAAT
1 AACATCTTATTACAGTCAAT
*
39677365 AACAT-TTATTCACATTCAAT
1 AACATCTTATT-ACAGTCAAT
39677385 A
1 A
39677386 TGTACTTATA
Statistics
Matches: 19, Mismatches: 1, Indels: 2
0.86 0.05 0.09
Matches are distributed among these distances:
19 5 0.26
20 14 0.74
ACGTcount: A:0.41, C:0.20, G:0.02, T:0.37
Consensus pattern (20 bp):
AACATCTTATTACAGTCAAT
Found at i:39678786 original size:45 final size:47
Alignment explanation
Indices: 39678728--39678832 Score: 137
Period size: 45 Copynumber: 2.3 Consensus size: 47
39678718 TGAGCTGATG
*
39678728 AATAGTAAGCTCTAATGAGT-TGAAACGGTAAGCTCTA-TCAAGCT-AA
1 AATAGTAAGCTCTAATGA-TATGAAACGGTAAGATCTAGT-AAGCTAAA
* *
39678774 AA-AGTAAGCTCTATTGATATGAAACGGTAAGATCTAGTGAGCTAAA
1 AATAGTAAGCTCTAATGATATGAAACGGTAAGATCTAGTAAGCTAAA
39678820 AATAGTAAGCTCT
1 AATAGTAAGCTCT
39678833 TACGAGCTGA
Statistics
Matches: 52, Mismatches: 3, Indels: 7
0.84 0.05 0.11
Matches are distributed among these distances:
44 1 0.02
45 34 0.65
46 7 0.13
47 10 0.19
ACGTcount: A:0.40, C:0.13, G:0.20, T:0.27
Consensus pattern (47 bp):
AATAGTAAGCTCTAATGATATGAAACGGTAAGATCTAGTAAGCTAAA
Found at i:39680579 original size:19 final size:21
Alignment explanation
Indices: 39680538--39680585 Score: 64
Period size: 20 Copynumber: 2.4 Consensus size: 21
39680528 TTAAAATTTT
39680538 AACTAAAAATATTAAAATAAA
1 AACTAAAAATATTAAAATAAA
* *
39680559 AA-TAAAAAT-TTAGAATCAA
1 AACTAAAAATATTAAAATAAA
39680578 AACTAAAA
1 AACTAAAA
39680586 TAAATAATAA
Statistics
Matches: 24, Mismatches: 2, Indels: 3
0.83 0.07 0.10
Matches are distributed among these distances:
19 10 0.42
20 12 0.50
21 2 0.08
ACGTcount: A:0.69, C:0.06, G:0.02, T:0.23
Consensus pattern (21 bp):
AACTAAAAATATTAAAATAAA
Found at i:39684296 original size:8 final size:8
Alignment explanation
Indices: 39684283--39684401 Score: 102
Period size: 8 Copynumber: 16.5 Consensus size: 8
39684273 TATTGATTAA
39684283 TTTTAATT
1 TTTTAATT
*
39684291 TTTTAAGT
1 TTTTAATT
*
39684299 TTTTCATT
1 TTTTAATT
39684307 TTTTAA-T
1 TTTTAATT
*
39684314 TTTTAAGT
1 TTTTAATT
* *
39684322 TTCTCA-T
1 TTTTAATT
39684329 TTTTAA--
1 TTTTAATT
39684335 TTTT-ATT
1 TTTTAATT
39684342 TTTTAA--
1 TTTTAATT
39684348 TTTT-ATT
1 TTTTAATT
39684355 TTTTAA--
1 TTTTAATT
39684361 TTTT-ATT
1 TTTTAATT
39684368 TTTTAATT
1 TTTTAATT
39684376 TTTTAATT
1 TTTTAATT
39684384 TTTTAA--
1 TTTTAATT
39684390 TTTTAATT
1 TTTTAATT
39684398 TTTT
1 TTTT
39684402 GAGTTTATTT
Statistics
Matches: 91, Mismatches: 8, Indels: 24
0.74 0.07 0.20
Matches are distributed among these distances:
5 3 0.03
6 18 0.20
7 24 0.26
8 46 0.51
ACGTcount: A:0.23, C:0.03, G:0.02, T:0.73
Consensus pattern (8 bp):
TTTTAATT
Found at i:39684316 original size:14 final size:13
Alignment explanation
Indices: 39684307--39684415 Score: 121
Period size: 13 Copynumber: 7.9 Consensus size: 13
39684297 GTTTTTCATT
*
39684307 TTTTAATTTTTAA
1 TTTTATTTTTTAA
39684320 GTTTCTCAT-TTTTAA
1 -TTT-T-ATTTTTTAA
39684335 TTTTATTTTTTAA
1 TTTTATTTTTTAA
39684348 TTTTATTTTTTAA
1 TTTTATTTTTTAA
39684361 TTTTATTTTTTAA
1 TTTTATTTTTTAA
39684374 TTTTTTAATTTTTTAA
1 --TTTT-ATTTTTTAA
*
39684390 TTTTAATTTTTTGA
1 TTTT-ATTTTTTAA
*
39684404 GTTTATTTTTTA
1 TTTTATTTTTTA
39684416 TTTCGGTTAA
Statistics
Matches: 85, Mismatches: 4, Indels: 13
0.83 0.04 0.13
Matches are distributed among these distances:
12 2 0.02
13 40 0.47
14 22 0.26
15 11 0.13
16 10 0.12
ACGTcount: A:0.23, C:0.02, G:0.03, T:0.72
Consensus pattern (13 bp):
TTTTATTTTTTAA
Found at i:39684346 original size:13 final size:13
Alignment explanation
Indices: 39684328--39684415 Score: 122
Period size: 13 Copynumber: 6.5 Consensus size: 13
39684318 AAGTTTCTCA
39684328 TTTTTAATTTTAT
1 TTTTTAATTTTAT
39684341 TTTTTAATTTTAT
1 TTTTTAATTTTAT
39684354 TTTTTAATTTTAT
1 TTTTTAATTTTAT
39684367 TTTTTAATTTTTTAAT
1 TTTTTAA--TTTT-AT
39684383 TTTTTAATTTTAAT
1 TTTTTAATTTT-AT
* *
39684397 TTTTTGAGTTTAT
1 TTTTTAATTTTAT
39684410 TTTTTA
1 TTTTTA
39684416 TTTCGGTTAA
Statistics
Matches: 69, Mismatches: 3, Indels: 6
0.88 0.04 0.08
Matches are distributed among these distances:
13 40 0.58
14 16 0.23
15 4 0.06
16 9 0.13
ACGTcount: A:0.23, C:0.00, G:0.02, T:0.75
Consensus pattern (13 bp):
TTTTTAATTTTAT
Found at i:39684969 original size:15 final size:15
Alignment explanation
Indices: 39684946--39684996 Score: 50
Period size: 15 Copynumber: 3.5 Consensus size: 15
39684936 ATACCCATGG
*
39684946 CCATTAAACCTTAAA
1 CCATAAAACCTTAAA
*
39684961 CCATAAAACCCTAAA
1 CCATAAAACCTTAAA
* *
39684976 CTAT-AGACCTTAAA
1 CCATAAAACCTTAAA
*
39684990 CCTTAAA
1 CCATAAA
39684997 TATTAAACCG
Statistics
Matches: 27, Mismatches: 8, Indels: 2
0.73 0.22 0.05
Matches are distributed among these distances:
14 10 0.37
15 17 0.63
ACGTcount: A:0.47, C:0.27, G:0.02, T:0.24
Consensus pattern (15 bp):
CCATAAAACCTTAAA
Found at i:39685296 original size:41 final size:41
Alignment explanation
Indices: 39685250--39685535 Score: 349
Period size: 41 Copynumber: 7.0 Consensus size: 41
39685240 GGGGTTATAT
* * *
39685250 GACTTTTAGCAGTGTTTTACTAGAAGCGCCGCTATTGCTCC
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
* * *
39685291 GACTTTTAGCGGCGTTTTACTAGAAGCGCCACTATTGCTTC
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
*
39685332 GACTTTTAGTGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
*
39685373 GACTTTTAGCGGCGTTTTACCAGAAGTGCCGCTATTGCTCC
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
* * *
39685414 GACTTTTCGCGGTGTTTTACCAGAAGCGCCGCTATTGCTCT
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
* * * ** *
39685455 GACTTTTAGTGGCGTTTTAACAAAAAATGCCGCTATTGCTCT
1 GACTTTTAGCGGCGTTTT-ACCAGAAGCGCCGCTATTGCTCC
* * * * **
39685497 G-TTTTTGGCTGCGTTTTACCAAAAATGCCGCTATTGCTC
1 GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTC
39685536 TATGTTTTAC
Statistics
Matches: 218, Mismatches: 26, Indels: 3
0.88 0.11 0.01
Matches are distributed among these distances:
40 21 0.10
41 177 0.81
42 20 0.09
ACGTcount: A:0.19, C:0.24, G:0.22, T:0.34
Consensus pattern (41 bp):
GACTTTTAGCGGCGTTTTACCAGAAGCGCCGCTATTGCTCC
Found at i:39691586 original size:47 final size:47
Alignment explanation
Indices: 39691520--39691945 Score: 692
Period size: 47 Copynumber: 9.1 Consensus size: 47
39691510 GAAATGATAG
39691520 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* *
39691567 TAAGGCATAATGGCCGATGTGATGAATGTGAAAGTGTATATGTGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* *
39691614 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATGTGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
*
39691661 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
*
39691708 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* *
39691755 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATATGTAA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
39691802 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
39691849 TAAGGCCTAATGGCCGATGTG-TGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* * * * * * * * *
39691895 CAGGGCCGAGTGGCCAACGTGATGGATGTGAAAGTGCATAAATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
39691942 TAAG
1 TAAG
39691946 TCCCGAAGGG
Statistics
Matches: 359, Mismatches: 19, Indels: 2
0.94 0.05 0.01
Matches are distributed among these distances:
46 40 0.11
47 319 0.89
ACGTcount: A:0.33, C:0.09, G:0.30, T:0.29
Consensus pattern (47 bp):
TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
Found at i:39692120 original size:37 final size:37
Alignment explanation
Indices: 39692064--39692142 Score: 115
Period size: 37 Copynumber: 2.1 Consensus size: 37
39692054 CCGAGCTCTA
* *
39692064 AAGACCCGATGACTACGTGTGG-GAATTTTGTCCGGGT
1 AAGACCCGATAACTACGTGTGGAG-ATTATGTCCGGGT
*
39692101 AAGACCCGATAACTTCGTGTGGAGATTATGTCCGGGT
1 AAGACCCGATAACTACGTGTGGAGATTATGTCCGGGT
39692138 AAGAC
1 AAGAC
39692143 TTCGTAATAA
Statistics
Matches: 38, Mismatches: 3, Indels: 2
0.88 0.07 0.05
Matches are distributed among these distances:
37 37 0.97
38 1 0.03
ACGTcount: A:0.25, C:0.19, G:0.30, T:0.25
Consensus pattern (37 bp):
AAGACCCGATAACTACGTGTGGAGATTATGTCCGGGT
Found at i:39694809 original size:18 final size:17
Alignment explanation
Indices: 39694783--39694816 Score: 50
Period size: 18 Copynumber: 1.9 Consensus size: 17
39694773 ACTCAACAAG
39694783 TAAACTCTTACTAGACAC
1 TAAACTCTTAC-AGACAC
*
39694801 TAAATTCTTACAGACA
1 TAAACTCTTACAGACA
39694817 TATGAATGAG
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 5 0.33
18 10 0.67
ACGTcount: A:0.41, C:0.24, G:0.06, T:0.29
Consensus pattern (17 bp):
TAAACTCTTACAGACAC
Found at i:39725890 original size:68 final size:66
Alignment explanation
Indices: 39725818--39725989 Score: 170
Period size: 67 Copynumber: 2.6 Consensus size: 66
39725808 CATCATGTGT
* * * *
39725818 ACAAGAGAGCTACAAGACATTATGATGTAGCTAGGTCGCATGGGTGATACTA-TG-TGTACACCA
1 ACAAGAGAGCTAC--GACA-TAT-ATGTAGCTAGGTCGCATGCGTGATACCAGTGAAGGACACCA
39725881 TGTAG
62 TGTAG
** * *
39725886 ACAAGAGAGCTACGGGATATATGTAGCTAGGTCGCATGCGTGGTTCCAGGTGAAGGACACCATGT
1 ACAAGAGAGCTACGACATATATGTAGCTAGGTCGCATGCGTGATACCA-GTGAAGGACACCATGT
39725951 AG
65 AG
* * * *
39725953 ACAAGAGAGCTACGAGATA-ATTTGGCTAGGTCACATG
1 ACAAGAGAGCTACGACATATATGTAGCTAGGTCGCATG
39725990 GGTGGTACTG
Statistics
Matches: 89, Mismatches: 12, Indels: 8
0.82 0.11 0.07
Matches are distributed among these distances:
64 24 0.27
65 3 0.03
66 19 0.21
67 30 0.34
68 13 0.15
ACGTcount: A:0.31, C:0.17, G:0.29, T:0.23
Consensus pattern (66 bp):
ACAAGAGAGCTACGACATATATGTAGCTAGGTCGCATGCGTGATACCAGTGAAGGACACCATGTA
G
Found at i:39725923 original size:64 final size:63
Alignment explanation
Indices: 39725842--39726025 Score: 201
Period size: 67 Copynumber: 2.9 Consensus size: 63
39725832 AGACATTATG
* *
39725842 ATGTAGCTAGGTCGCATGGGTGATACTATGTGTACACCATGTAGACAAGAGAGCTACGGGATA
1 ATGTAGCTAGGTCGCATGGGTGGTACTATGTGTACACCATGTAGACAAGAGAGCTACGAGATA
* * * * *
39725905 TATGTAGCTAGGTCGCATGCGTGGTTCCAGGTGAAGGACACCATGTAGACAAGAGAGCTACGAGA
1 -ATGTAGCTAGGTCGCATGGGTGGTACTA--TG-TGTACACCATGTAGACAAGAGAGCTACGAGA
39725970 TA
62 TA
* * * *
39725972 ATTTGGCTAGGTCACATGGGTGGTACTGA-GTGTTCACCATGT-GTACAAGAGAGC
1 ATGTAGCTAGGTCGCATGGGTGGTACT-ATGTGTACACCATGTAG-ACAAGAGAGC
39726026 CAAACTATAT
Statistics
Matches: 99, Mismatches: 16, Indels: 11
0.79 0.13 0.09
Matches are distributed among these distances:
62 1 0.01
63 19 0.19
64 25 0.25
66 23 0.23
67 31 0.31
ACGTcount: A:0.28, C:0.17, G:0.31, T:0.24
Consensus pattern (63 bp):
ATGTAGCTAGGTCGCATGGGTGGTACTATGTGTACACCATGTAGACAAGAGAGCTACGAGATA
Found at i:39732745 original size:34 final size:34
Alignment explanation
Indices: 39732707--39732773 Score: 125
Period size: 34 Copynumber: 2.0 Consensus size: 34
39732697 ATATGTATGC
39732707 TTGATATGGTTAGATTGAATTATGGTAAACATAA
1 TTGATATGGTTAGATTGAATTATGGTAAACATAA
*
39732741 TTGATATGGTTAGGTTGAATTATGGTAAACATA
1 TTGATATGGTTAGATTGAATTATGGTAAACATA
39732774 TGTGTCTTTT
Statistics
Matches: 32, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
34 32 1.00
ACGTcount: A:0.36, C:0.03, G:0.22, T:0.39
Consensus pattern (34 bp):
TTGATATGGTTAGATTGAATTATGGTAAACATAA
Found at i:39741809 original size:26 final size:27
Alignment explanation
Indices: 39741780--39741839 Score: 77
Period size: 27 Copynumber: 2.3 Consensus size: 27
39741770 CCACATATAT
*
39741780 ATATCTG-TTCTGGTGGCCTAGCCACA
1 ATATCTGTTTCTGGTGACCTAGCCACA
* * *
39741806 ATATCTGTTTCTGGTGACTTCGTCACA
1 ATATCTGTTTCTGGTGACCTAGCCACA
39741833 ATATCTG
1 ATATCTG
39741840 GCAGCCTCGC
Statistics
Matches: 29, Mismatches: 4, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
26 7 0.24
27 22 0.76
ACGTcount: A:0.20, C:0.23, G:0.20, T:0.37
Consensus pattern (27 bp):
ATATCTGTTTCTGGTGACCTAGCCACA
Found at i:39745885 original size:9 final size:9
Alignment explanation
Indices: 39745871--39745903 Score: 59
Period size: 9 Copynumber: 3.8 Consensus size: 9
39745861 TATAGACACC
39745871 TATTATTTT
1 TATTATTTT
39745880 TATTATTTT
1 TATTATTTT
39745889 TATTA-TTT
1 TATTATTTT
39745897 TATTATT
1 TATTATT
39745904 ATCCTTATTT
Statistics
Matches: 23, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
8 8 0.35
9 15 0.65
ACGTcount: A:0.24, C:0.00, G:0.00, T:0.76
Consensus pattern (9 bp):
TATTATTTT
Found at i:39752434 original size:40 final size:40
Alignment explanation
Indices: 39752383--39753322 Score: 1559
Period size: 40 Copynumber: 23.6 Consensus size: 40
39752373 CATTTGAATG
* *
39752383 ATATTCGGGCTAAGACTCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39752423 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752463 ATATCCGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752503 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39752543 ATATCTGGGCTAAGACCCGAAAGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752583 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCTAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752623 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752663 ATATCCGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752703 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752743 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752783 ATATCCGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752823 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752863 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39752903 ATATCTGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752943 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39752983 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39753023 ATATCCGGGCTAAGACCTGAAGGCATTTGTACGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39753063 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39753103 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39753143 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAA-TGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39753182 ATATCCGGGCTAAGA-CCGAA-GC-GTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39753219 ATATCCGGGCTAAGA-CCGAAGGCAATTGTGC-AAGTTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAA-TTGAT
* * *
39753258 ATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGCT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39753298 ATACCCGGGTTAAGACCCGAAGGCA
1 ATATCCGGGCTAAGACCCGAAGGCA
39753323 ATTGAGCTTG
Statistics
Matches: 851, Mismatches: 43, Indels: 12
0.94 0.05 0.01
Matches are distributed among these distances:
36 9 0.01
37 26 0.03
38 9 0.01
39 44 0.05
40 762 0.90
41 1 0.00
ACGTcount: A:0.28, C:0.18, G:0.27, T:0.26
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
Found at i:39760275 original size:27 final size:27
Alignment explanation
Indices: 39760245--39760422 Score: 178
Period size: 27 Copynumber: 6.6 Consensus size: 27
39760235 ATATTGAGTC
* *
39760245 CGCACACTCAGTGCTATATAATCAACT
1 CGCACACTTAGTGCTACATAATCAACT
* *
39760272 CGCACACTTAGTGCTACGTAATCAAAT
1 CGCACACTTAGTGCTACATAATCAACT
*
39760299 CGCACACTTAGTGCTACATAGTCAAACT
1 CGCACACTTAGTGCTACATAATC-AACT
** *** *
39760327 CGCACACTTAGTGCCGCACGGTCAATT
1 CGCACACTTAGTGCTACATAATCAACT
* **
39760354 CGCACACTTAGTGC-ATCATATTCATTT
1 CGCACACTTAGTGCTA-CATAATCAACT
* * *
39760381 CGCACACTTAGTGCAACATAGTCAAAT
1 CGCACACTTAGTGCTACATAATCAACT
39760408 CGCACACTTAGTGCT
1 CGCACACTTAGTGCT
39760423 GTACAATTTA
Statistics
Matches: 127, Mismatches: 21, Indels: 6
0.82 0.14 0.04
Matches are distributed among these distances:
27 104 0.82
28 23 0.18
ACGTcount: A:0.30, C:0.29, G:0.15, T:0.26
Consensus pattern (27 bp):
CGCACACTTAGTGCTACATAATCAACT
Found at i:39760384 original size:82 final size:81
Alignment explanation
Indices: 39760266--39760421 Score: 233
Period size: 82 Copynumber: 1.9 Consensus size: 81
39760256 TGCTATATAA
* *
39760266 TCAACTCGCACACTTAGTGCTACGTAATCAAATCGCACACTTAGTGCTACATAGTCAAACTCGCA
1 TCAACTCGCACACTTAGTGCTACATAATCAAATCGCACACTTAGTGCAACATAGTCAAA-TCGCA
39760331 CACTTAGTGCCGCACGG
65 CACTTAGTGCCGCACGG
* * **
39760348 TCAATTCGCACACTTAGTGC-ATCATATTCATTTCGCACACTTAGTGCAACATAGTCAAATCGCA
1 TCAACTCGCACACTTAGTGCTA-CATAATCAAATCGCACACTTAGTGCAACATAGTCAAATCGCA
39760412 CACTTAGTGC
65 CACTTAGTGC
39760422 TGTACAATTT
Statistics
Matches: 67, Mismatches: 6, Indels: 3
0.88 0.08 0.04
Matches are distributed among these distances:
81 16 0.24
82 51 0.76
ACGTcount: A:0.29, C:0.29, G:0.15, T:0.26
Consensus pattern (81 bp):
TCAACTCGCACACTTAGTGCTACATAATCAAATCGCACACTTAGTGCAACATAGTCAAATCGCAC
ACTTAGTGCCGCACGG
Found at i:39768332 original size:27 final size:27
Alignment explanation
Indices: 39768302--39768479 Score: 205
Period size: 27 Copynumber: 6.6 Consensus size: 27
39768292 ATATTGAGTC
* * * *
39768302 CGCACACTCAGTGCTATATAATCAACT
1 CGCACACTTAGTGCTACATAGTCAAAT
* *
39768329 CGCACACTTAGTGCTACGTAATCAAAT
1 CGCACACTTAGTGCTACATAGTCAAAT
39768356 CGCACACTTAGTGCTACATAGTCAAACT
1 CGCACACTTAGTGCTACATAGTCAAA-T
** * *
39768384 CGCACACTTAGTGCCGCATGGTCAATT
1 CGCACACTTAGTGCTACATAGTCAAAT
* **
39768411 CGCACACTTAGTGC-ATCATATTCATTT
1 CGCACACTTAGTGCTA-CATAGTCAAAT
*
39768438 CGCACACTTAGTGCAACATAGTCAAAT
1 CGCACACTTAGTGCTACATAGTCAAAT
39768465 CGCACACTTAGTGCT
1 CGCACACTTAGTGCT
39768480 GTACAATTTA
Statistics
Matches: 130, Mismatches: 18, Indels: 6
0.84 0.12 0.04
Matches are distributed among these distances:
27 106 0.82
28 24 0.18
ACGTcount: A:0.30, C:0.28, G:0.15, T:0.27
Consensus pattern (27 bp):
CGCACACTTAGTGCTACATAGTCAAAT
Found at i:39768441 original size:82 final size:81
Alignment explanation
Indices: 39768323--39768478 Score: 233
Period size: 82 Copynumber: 1.9 Consensus size: 81
39768313 TGCTATATAA
* *
39768323 TCAACTCGCACACTTAGTGCTACGTAATCAAATCGCACACTTAGTGCTACATAGTCAAACTCGCA
1 TCAACTCGCACACTTAGTGCTACATAATCAAATCGCACACTTAGTGCAACATAGTCAAA-TCGCA
39768388 CACTTAGTGCCGCATGG
65 CACTTAGTGCCGCATGG
* * **
39768405 TCAATTCGCACACTTAGTGC-ATCATATTCATTTCGCACACTTAGTGCAACATAGTCAAATCGCA
1 TCAACTCGCACACTTAGTGCTA-CATAATCAAATCGCACACTTAGTGCAACATAGTCAAATCGCA
39768469 CACTTAGTGC
65 CACTTAGTGC
39768479 TGTACAATTT
Statistics
Matches: 67, Mismatches: 6, Indels: 3
0.88 0.08 0.04
Matches are distributed among these distances:
81 16 0.24
82 51 0.76
ACGTcount: A:0.29, C:0.28, G:0.15, T:0.27
Consensus pattern (81 bp):
TCAACTCGCACACTTAGTGCTACATAATCAAATCGCACACTTAGTGCAACATAGTCAAATCGCAC
ACTTAGTGCCGCATGG
Found at i:39771768 original size:40 final size:40
Alignment explanation
Indices: 39771717--39772661 Score: 1595
Period size: 40 Copynumber: 23.6 Consensus size: 40
39771707 CATTTGAATG
*
39771717 ATATCTGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39771757 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
**
39771797 ATATCCGGGCTAAGACCTAAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39771837 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39771877 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCAAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39771917 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39771957 ATATCCGGGATAAGACCCGAAGGCATTTGTGTGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39771997 ATATCCGGGCTAAAACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* * *
39772037 ATATCCGGGTTAAAACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39772077 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39772117 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772157 ATATCCGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39772197 ATATCCGAGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772237 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772277 ATATCCGGGCTAAGACCTGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39772317 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATGGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772357 ATATCCGGGTTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772397 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTAAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
39772437 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772477 ATATCCGGGATAAGACCCGAAGGCATTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* * *
39772517 ATATCCGGGCTAAGACCCTACGGCGTTTGTGCGAATTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
*
39772557 ATATCCGGGCTAAGACCCGAAGGCAATTGTGC-AAGTTGAT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAA-TTGAT
* * *
39772597 ATATCCGGGCTAAGACCCGAAGGCATTCGTGCGAGTTGCT
1 ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
* *
39772637 ATACCCGGGTTAAGACCCGAAGGCA
1 ATATCCGGGCTAAGACCCGAAGGCA
39772662 ATTGAGCTTG
Statistics
Matches: 855, Mismatches: 48, Indels: 4
0.94 0.05 0.00
Matches are distributed among these distances:
39 2 0.00
40 852 1.00
41 1 0.00
ACGTcount: A:0.28, C:0.19, G:0.27, T:0.26
Consensus pattern (40 bp):
ATATCCGGGCTAAGACCCGAAGGCATTTGTGCGAATTGAT
Found at i:39778499 original size:16 final size:16
Alignment explanation
Indices: 39778467--39778499 Score: 50
Period size: 16 Copynumber: 2.1 Consensus size: 16
39778457 ATTATCTATC
*
39778467 TTATTTTATTTTATTT
1 TTATTTTATTATATTT
39778483 TTATTTTATTA-ATTT
1 TTATTTTATTATATTT
39778498 TT
1 TT
39778500 GAAGATTCTT
Statistics
Matches: 16, Mismatches: 1, Indels: 1
0.89 0.06 0.06
Matches are distributed among these distances:
15 6 0.38
16 10 0.62
ACGTcount: A:0.21, C:0.00, G:0.00, T:0.79
Consensus pattern (16 bp):
TTATTTTATTATATTT
Found at i:39789051 original size:49 final size:49
Alignment explanation
Indices: 39788977--39789364 Score: 560
Period size: 49 Copynumber: 8.1 Consensus size: 49
39788967 CCCTTCGGGA
* * * * *
39788977 CTTATCACAT-T-TATACACTTTCACATCCATCACGTTGGCCACTCGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
* * *
39789024 CCTGTCACATATATATACACTTCCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
* * * *
39789073 CTTATCAC--ATATATACACTCTCACATTCATCACGTTGGCCACTCA-GC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCA-TTAGGC
* * *
39789120 CCTGTCACATATATATACACTTCCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
39789169 CTTATCAC--ATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
*
39789216 CCTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
39789265 CTTATCAC--ATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
39789312 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
1 CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
39789361 CTTA
1 CTTA
39789365 CTATCATTTC
Statistics
Matches: 304, Mismatches: 27, Indels: 18
0.87 0.08 0.05
Matches are distributed among these distances:
47 137 0.45
48 5 0.02
49 162 0.53
ACGTcount: A:0.29, C:0.31, G:0.09, T:0.31
Consensus pattern (49 bp):
CTTATCACATATATATACACTTTCACATTCATCACATCGGCCATTAGGC
Found at i:39789141 original size:96 final size:96
Alignment explanation
Indices: 39788977--39789364 Score: 618
Period size: 96 Copynumber: 4.0 Consensus size: 96
39788967 CCCTTCGGGA
* * * * *
39788977 CTTATCACATTTATACACTTTCACATCCATCACGTTGGCCACTC-GGCCCTGTCACATATATATA
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCA-TCAGGCCCTATCACATATATATA
39789041 CACTTCCACATTCATCACATCGGCCATTAGGC
65 CACTTCCACATTCATCACATCGGCCATTAGGC
* * * *
39789073 CTTATCACATATATACACTCTCACATTCATCACGTTGGCCACTCA-GCCCTGTCACATATATATA
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCA-TCAGGCCCTATCACATATATATA
39789137 CACTTCCACATTCATCACATCGGCCATTAGGC
65 CACTTCCACATTCATCACATCGGCCATTAGGC
*
39789169 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGCCCTATCACATATATATAC
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATCAGGCCCTATCACATATATATAC
*
39789234 ACTTTCACATTCATCACATCGGCCATTAGGC
66 ACTTCCACATTCATCACATCGGCCATTAGGC
* *
39789265 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATTAGGCCTTATCACATATATATAC
1 CTTATCACATATATACACTTTCACATTCATCACATCGGCCATCAGGCCCTATCACATATATATAC
*
39789330 ACTTTCACATTCATCACATCGGCCATTAGGC
66 ACTTCCACATTCATCACATCGGCCATTAGGC
39789361 CTTA
1 CTTA
39789365 CTATCATTTC
Statistics
Matches: 280, Mismatches: 10, Indels: 4
0.95 0.03 0.01
Matches are distributed among these distances:
95 2 0.01
96 278 0.99
ACGTcount: A:0.29, C:0.31, G:0.09, T:0.31
Consensus pattern (96 bp):
CTTATCACATATATACACTTTCACATTCATCACATCGGCCATCAGGCCCTATCACATATATATAC
ACTTCCACATTCATCACATCGGCCATTAGGC
Found at i:39791859 original size:44 final size:43
Alignment explanation
Indices: 39791801--39791883 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
39791791 ATCTGCTATG
* * * *
39791801 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCCGCTCTCCGAC-AATACGGAGATGCCAAATCTGTT
*
39791845 TCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATC
39791884 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
43 18 0.53
44 16 0.47
ACGTcount: A:0.25, C:0.28, G:0.17, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATCTGTT
Found at i:39792148 original size:220 final size:220
Alignment explanation
Indices: 39791762--39795019 Score: 4716
Period size: 220 Copynumber: 14.8 Consensus size: 220
39791752 GGATGTCACA
* *
39791762 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ** * * *
39791827 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39791892 TCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCTCTTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* **
39791957 AAGAATGTCAAATCATCTTATATCT
196 AAGAATGCCAAATCATCTTGGATCT
* *
39791982 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* *
39792047 GAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39792112 TTTGCTTTAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCAATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39792177 AAGAATGCCAAATCATCTTGAATCT
196 AAGAATGCCAAATCATCTTGGATCT
* *
39792202 GCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * * *
39792267 GGGGATGACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*** * * ** * *
39792332 TCAAATTCTGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39792397 -AGTAATGCCAAATCATTTTGGATCT
196 AAG-AATGCCAAATCATCTTGGATCT
* * * * * * *
39792422 GATTCGACGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTCGATCTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
39792487 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39792552 TCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCATGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39792617 AAGAATG-CAAGATCATCTTAGATCT
196 AAGAATGCCAA-ATCATCTTGGATCT
* *
39792642 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * **
39792707 GAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39792772 TTTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACAATTTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39792837 AAGAATGCCAAATCATCTTGGATCT
196 AAGAATGCCAAATCATCTTGGATCT
*
39792862 GCTTCGATGCGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATTA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAA-TA
** ** *
39792926 TGGAGATGCCAAATCTGTTTCTTAAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGG
65 TGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGG
* * *
39792991 CTCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGCCTTCGATTTGCTCCTTGTAAACA
130 ATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
*
39793056 CAAGAATGCCAAATCATCTTGTATCT
195 CAAGAATGCCAAATCATCTTGGATCT
* * * * * *
39793082 GCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTCGATCTACCCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39793147 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCATATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39793212 TCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39793277 AAGAATGCCAAATCATCTTGGACCT
196 AAGAATGCCAAATCATCTTGGATCT
* * *
39793302 GCTTCGATGTGAAAACATCCAAAGGTTAGATTTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * **** *
39793367 GGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAATACAGAGATGCCAAATCATGTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39793432 TCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
**
39793497 AAGAATGGTAAATCATCTTGGATCT
196 AAGAATGCCAAATCATCTTGGATCT
* *
39793522 GCATCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTCTTCGATCTGCTCTCCGTC-AATTA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAA-TA
* **** *
39793586 TGGAGATGCCAAATCTGTTTCTTCAATCCCCTCTCTGACAATAAAGAGATGCCAAATCATCTTGG
65 TGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGG
* * * *
39793651 ATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACA
130 ATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
**
39793716 CAAGAATGGTAAATCATCTTGGATCT
195 CAAGAATGCCAAATCATCTTGGATCT
*
39793742 GCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39793807 GGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39793872 TGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* *
39793937 AAGAATTCTAAATCATCTTGGATCT
196 AAGAATGCCAAATCATCTTGGATCT
* * *
39793962 GTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39794027 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39794092 TCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTTCGACTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39794157 AAGAATGCCAAATCATCTTGGACCT
196 AAGAATGCCAAATCATCTTGGATCT
*
39794182 GCTTCGATGTGAAAACATCCAGAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39794247 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39794312 TCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
*
39794376 CAAGAATGCCAAATCATCTTGGACCT
195 CAAGAATGCCAAATCATCTTGGATCT
* *
39794402 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ** * * *
39794467 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39794532 TCCGCTTCAGTGTAAACACCTGAAGATCAAATCTACTATGTCTTCGTTTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* **
39794596 AGGAATGCCAAATCATCTTATATCT
196 AAGAATGCCAAATCATCTTGGATCT
* * * *
39794621 GCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGTCTTCGATCTGCTCTCCATTGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * * *
39794686 GAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGAGGCCAAATCATCTCGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * ** * *
39794751 TC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
131 TCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
*
39794815 C-AGTAATGCCAAATCATTTTGGATCT
195 CAAG-AATGCCAAATCATCTTGGATCT
* * * * * * *
39794841 GCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39794906 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39794971 TCTGCTTCAATGTGAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGA
131 TCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGA
39795020 ACTACTCTCC
Statistics
Matches: 2734, Mismatches: 287, Indels: 32
0.90 0.09 0.01
Matches are distributed among these distances:
218 1 0.00
219 199 0.07
220 2490 0.91
221 12 0.00
222 32 0.01
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (220 bp):
GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
AAGAATGCCAAATCATCTTGGATCT
Found at i:39792244 original size:89 final size:87
Alignment explanation
Indices: 39792094--39792254 Score: 216
Period size: 89 Copynumber: 1.8 Consensus size: 87
39792084 CAATACAGAG
* * * *
39792094 ATGCCAAATCATCTTGGATTTGCTTTAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCAA
1 ATGCCAAATCATCTTGAATCTGCTTGAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCAA
*
39792159 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* *
39792181 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCC-AAAGGTTAGATCTGGTATGTCTT
1 ATGCCAAATCATCTTGAATCTGCTT-GA-GTGAAAACA-CCTAAAGGTCAGATCTGCTATGTCTT
*
39792245 CGATCTGCTC
63 CAATCTGCTC
39792255 TCCGTCGAAT
Statistics
Matches: 63, Mismatches: 8, Indels: 4
0.84 0.11 0.05
Matches are distributed among these distances:
87 23 0.37
88 1 0.02
89 37 0.59
90 2 0.03
ACGTcount: A:0.29, C:0.21, G:0.17, T:0.33
Consensus pattern (87 bp):
ATGCCAAATCATCTTGAATCTGCTTGAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCAA
TCTGCTCCTTGTAAACACAAGA
Found at i:39792583 original size:440 final size:440
Alignment explanation
Indices: 39791762--39809456 Score: 15112
Period size: 440 Copynumber: 40.4 Consensus size: 440
39791752 GGATGTCACA
* *
39791762 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ** * * *
39791827 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39791892 TCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGC-TCTTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTC-TTGTAAACA
* **
39791956 CAAGAATGTCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* ** * *
39792021 TCTTCGATCTGCTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* * *
39792086 ATACAGAGATGCCAAATCATCTTGGATTTGCTTTAGTGTAAACACCTAAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39792151 GTCTTCAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39792202 GCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * * *
39792267 GGGGATGACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*** * * ** *
39792332 TCAAATTCTGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* * * * *
39792397 -AGTAATGCCAAATCATTTTGGATCTGATTCGACGTGAAATCGTCCAAAGGTCAGATCTGCTATG
196 AAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* *
39792461 TCTTCGATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
*
39792526 ATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39792591 GTCTTCGATTTGCTCCATGTAAACACAAGAATG-CAAGATCATCTTAGATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAA-ATCATCTTGGATCT
* *
39792642 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * **
39792707 GAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * * *
39792772 TTTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACAATTTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
*
39792837 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGCGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* ** ** *
39792902 CTTCGATCTGCTCTCCGTCAATTATGGAGATGCCAAATCTGTTTCTTAAATCCGCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39792967 TACAGAGATGCCAAATCATCTTGGCTCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39793032 CCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGTATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * * * * *
39793082 GCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTCGATCTACCCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39793147 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCATATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39793212 TCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* * *
39793277 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATTTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * ****
39793342 CTTCGATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * *
39793407 TACAGAGATGCCAAATCATGTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
**
39793472 TCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39793522 GCATCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTCTTCGATCTGCTCTCCGTC-AATTA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAA-TA
* **** *
39793586 TGGAGATGCCAAATCTGTTTCTTCAATCCCCTCTCTGACAATAAAGAGATGCCAAATCATCTTGG
65 TGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGG
* * * * *
39793651 ATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACA
130 ATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
** *
39793716 CAAGAATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * * *
39793781 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* * *
39793846 ATACAGAGATGCCAAATCATCTTGGATGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * * *
39793911 GTCTTCAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTGGATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39793962 GTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39794027 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * * *
39794092 TCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTTCGACTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* *
39794157 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAGAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39794222 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39794287 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTAT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTAT
*
39794351 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39794402 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ** * * *
39794467 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39794532 TCCGCTTCAGTGTAAACACCTGAAGATCAAATCTACTATGTCTTCGTTTTGC-TCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* ** * *
39794596 AGGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* ** * * *
39794661 CTTCGATCTGCTCTCCATTGAATATGAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * ** *
39794726 TACAGAGAGGCCAAATCATCTCGGATC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTAT
326 TACAGAGATGCCAAATCATCTTGGATCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39794790 GTCTTCGATTTGCTTCTTGTAAACAC-AGTAATGCCAAATCATTTTGGATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCT
* * * * * * *
39794841 GCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39794906 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * ** * * *
39794971 TCTGCTTCAATGTGAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGAACTAC-TCTCCGTCG
131 TCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCT-TGT-A
* ** * * * * * * * * *
39795034 AATA-TGGAGATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTG-ACA-ATACAGA-GACACCA
191 AACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GA
** * * * * * * * *
39795092 AAT-C-A--TCTTGGATCTACT-TCAGTGTAAACACCT-GA-AGGTCAAATCTACTATGTCTTCG
251 TCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCT-GT-T-TCTTCG
* * * * *
39795150 ATTTGCTCTTTGTA-AACACA-AGAATGCCAAATCATTTTGGATCTGCTTC-GATGTGAAATCGT
310 ATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-A
* * * ** *
39795212 CC-AAAGGTCAGATCTGCTATTTCTTCGAACTTCT-CTCCATTG--AATA-TGGAGATTCCAAAT
369 CCTGAAGGTCAGATCTGCTATGTCTTCG-A-TT-TGCTCC-TTGTAAACACAAGA-ATGCCAAAT
* *
39795272 CTATTTCTTCGATTT
429 C-A--TCTTGGATCT
* * * * * * * *
39795287 G-TTC--TCTGACAATACA--GAGATGG-CA-A-AT-C-A--TCTTGGATCT-ATTTCAGT-GTA
1 GCTTCGATGTGA-AA-ACATCCA-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--
* * * * * * *
39795338 AACACTTGA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCA
61 AATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCA
* * * * *
39795399 AAGCATCTTAGATCTGCTTC-GATGTGAGAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATC
119 AATCATCTTGGATCTGCTTCAG-TGT-A-AACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATT
* * * * ** * * * * * * *
39795462 TAC-TCTCCGTCGAATA-TGGAGATGCCAAATCTGTTTATTCGATTTG-TTC--TCTGACAATAT
180 TGCTTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACAT
* * * ** * * * * * *
39795522 --AGA-GACACCAAAT-C-A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAAATC
239 CCAAAGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATC
* * *
39795577 TACTATGTCTATC-A-TT-TTCTCCTTGTA-AACACA-AGAATGCCAAATCATTTTGGATCTGCT
300 T-GT-T-TCT-TCGATTTGTTCT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCT
* * * * *
39795637 TC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-
357 TCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACAC
** * ** *
39795698 TGGAGATGCCAAATCTGTTTCTTCAATCC
416 AAGA-ATGCCAAATC---ATCTTGGATCT
* * * * * * * * *
39795727 AC-TC--TCTG-AAA-ATACAGAGATGCCA-A-AT-C-A--TCTTGGCTCTGCT-TCAGT-GTAA
1 GCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--A
* * * * * *
39795779 ACACCTGAAGGT-CC-GATCTGCTATGTCTTCGATTTGCTC-CTGGTA-AACACA-AGAATGCCA
62 ATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCA
* * ** * * * * *
39795839 AATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAGGTCAGATCTACTATGTCTTCGATCT
119 AATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTT
* * * * * *
39795903 GC-TCTCCGTCGAATATA-AAG-CTGCCAAATCTATTTCTTTGATTTG-TTC--TTTGACAATAC
181 GCTTCT-TGT--AA-ACACAAGAATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-AC
* * * * * * * * * * * *
39795962 A--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAACACCT-GA-AGGCCAGAT
237 ATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAAT
* * * *
39796016 CTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GAACTTGAT
299 CTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATC-TGCT
* * * * * *
39796077 TCGATGTGAAAACATCC-AAAGCTCAGTTCTGCTATGTCTTCGATCTT-CT-CTCCGTCAAATA-
357 TC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-TTGCTCCT-TGT-AAACAC
** * ** *
39796138 TGGAGATGCCAAATCTGTTTCTTCAATCC
416 AAGA-ATGCCAAATC---ATCTTGGATCT
* * * * * * * * ** ** * *
39796167 AC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTAGATCCACT-TTAGAGCAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG-TCGAA
* * * * * * * *** * *
39796220 CACTTGA-AGGTCAGATCTGCTATGTTTTCGATCTACCCCCTGTA-AACACA-AGAATGCCAAAT
63 TA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAAT
* * * *
39796282 CGTCTTGGATCTGCTTC-GATGTAAAAACATCC-AAAGGTCAGATCTGCTATATCTTCGATCTG-
122 CATCTTGGATCTGCTTCAG-TGT--AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGC
* * * ** * * * * * * **
39796344 TTCTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGATATG-TTC--TCTGACAATATAGA
183 TTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCA
* * * * * * * * * * * **
39796405 GATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAACACCT-GA-AGGTCGGATCTGCT
242 AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T
* ** * **
39796461 ATGTCTTCAATTTACTC-CTCGTA-AACACA-AGAATGGTAAATCATCTTGGATCTGCTTCGATG
303 -T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-G
* * * * * * * **
39796523 TGAAAACATCC-AAATGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGAGAT
361 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-AT
* * *
39796585 GCCAAATCTGTTTCTTTGATTT
422 GCCAAATC---ATCTTGGATCT
* * * * * * *
39796607 G-TTC--TCTGACAATACA--GAGATGTCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--A
* * * *
39796659 ACACCTGAAG-T-CCAGATCT-TCAATGTCTTCGA-TT-TTCTCCTTGTA-AACACA-AGAATGC
62 ATA--TGGAGATGCCAAATCTGT---T-TCTTCGATTTGTTCT-C-TG-ACAATACAGAG-ATGC
* * * * * * *
39796717 CAAATCATCTTGGACCTTCTTC-GATGTGAAACCATCCAG-AGGTCAGATCTTCAATGTATTAGA
117 CAAATCATCTTGGATCTGCTTCAG-TGT-AAA-CA-CCTGAAGGTCAGATCTGCTATGTCTTCGA
* * * * ** * ** * *
39796780 TCTAC-TCTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTCAATCCGC-TC--TCTGACAAT
178 TTTGCTTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-
* * * * * ** * * * * * *
39796840 ACA--GAGATGCCA-A-AT-C-A--TCTTAAATCCGCT-TCAGTGTAAACACCT-GA-AGGTCAA
235 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAA
* * *
39796894 ATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTTAGATCTGC
297 ATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGC
* * * **
39796956 TTCGATGTGAAAACATCC-AAAGGTCAGATTTGCTATGTCTTCGATCAGCTCTCCATTG-AATA-
356 TTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAA-AC
** * * *
39797018 TGAAG-ATGCCAAATCTGTTTCTTCGATTT
414 ACAAGAATGCCAAATC---ATCTTGGATCT
* * * * * * * * *
39797047 G-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--A
* * * * * * * *
39797099 AAACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTG-CCCCTTGTA-AACACA-AGAATGCCA
62 ATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCA
* * * * * *
39797159 AATCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AAAGGTTAGATCTGCTATGCCTTCGATC
119 AATCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATT
* * * ** * * ** *
39797222 TGC-TCTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGAT-TTTTTC--TCTGACAATAC
180 TGCTTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-AC
* * * * * * * * * * * * *
39797282 A--GAGATGCCA-A-AT-C-A--TCTTGGATCTG-TTTCAGTGTAAAAACCT-GA-AGGTCAGAT
237 ATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAAT
* * * **
39797336 CTGCTATGTCTTCGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTGTT
299 CTG-T-T-TCTTCGATTTGTTCTCTGAC-AATACAGAGATGCC--A---A---A-TC-A------
*
39797401 CTCATATATGTAAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATG
344 -TC---T-TG-------------GATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39797466 TCTTCGACTTGCTCCTTGTAAACACCAGAATG-CAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39797515 GCTTCGATGTGAAAACATCCAAAGGTCATATCTACTATGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39797580 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39797645 TCTGCTTCAGTGTAAA-ACCTGAAGATCAGATCTGCTATGCCTTCGATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* *
39797709 AAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAACACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * *
39797774 CTTTGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCCGTTTCTTTGATTTGTTCTGTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39797839 TACAGAGATGCCAAGTCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39797904 TCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATTTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39797954 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * ** *
39798019 GGAGATGCCAAATCTGTTTCTTCTATTTGTTCACTGACAATACAGAGACACCAAATAATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39798084 TCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTTTGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* *
39798149 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGATAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39798214 CTTCGATCTGCTTTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTAACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39798279 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * * * *
39798344 TCTTCAATTTACTCCTCGTAAACACAAGAATTCTAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39798394 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39798459 GGAGATGCTAATTCTGTTTTTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39798524 TCTGCTTCAGTGTAAACTCCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
* * * * *
39798588 CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * *
39798653 TATTAGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
*
39798718 ATACAGAGATGCCAAATAATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * * * *
39798783 GTCTTCAATTTTCTCCTCGTAAACACAAGAATTCTAAATCATCTTGGATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39798834 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGACTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* *
39798899 GGAGATGCTAATTCTGTTT-TTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39798963 TCTGCTTCAGTGTAAACTCCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
* * * * *
39799027 CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * *
39799092 TATTAGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* * * * * *
39799157 ATACAGAAATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTCCTAAAGGCCAGATCTACTAA
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39799222 GTCTTCAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39799273 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * ** * * *
39799338 GGAGAAGCCAAATCTGTCTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39799403 TCCGCTTCAATGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGC-TCTGTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCT-TGTAAACA
** *
39799467 CAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * * ** * *
39799532 CCTTCGATCTGCTTTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* *
39799597 ATACAGAGATGCCAAATCATCTTGGATCTACTTTAGTGTAAACACCTGAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * *
39799662 GTCTTCAATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39799713 GCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ** * *
39799778 GGGGATAACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*** * ** *
39799843 TCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* * * * *
39799908 -AGTAATGCCAAATCGTTTTGGATCTGATTCGACGTGAAATCATCCAAAGGTCAGATCTGCTATG
196 AAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * *
39799972 TCTTCGACCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* *
39800037 ATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTAAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * * *
39800102 GTCTTCGAGTTGCTCCATGTAAACACAAGAATGCCAGATCATCTTAGATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39800153 GCTTCGACGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * **
39800218 GAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * * * *
39800283 TTTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATTTCTTCGATTTGCTCCTTGTAACCAT
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39800348 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * ** ** *
39800413 CTTCGATCTGCTCTCCGTCAATTATGGAGTTGGCAAATCTGTTTCTTAAATCCGCTCTCT-ACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39800477 TACAGAGATGCCAAATCATCTTGGCTCTGCTTCAATGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * *
39800542 CCTTCGATTTGCTACTTGTAAACACAAGAATGCCAAATCATCTTGTATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * * * * *
39800592 GCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTCGATCTACCCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39800657 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCATATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39800722 TCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* *
39800787 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGAT-TGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * ****
39800851 CTTCGATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * *
39800916 TACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
**
39800981 TCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39801031 GCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39801096 GGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * * *
39801161 TGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* * * *
39801226 AAGAATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39801291 CTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39801355 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * *
39801420 TCTTCGACTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39801470 GCTTCGATGTGAAAACATCCAGAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39801535 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39801600 TCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
* *
39801664 CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* ** *
39801729 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* * * * *
39801794 ATACGGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGATCAAATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * **
39801859 GTCTTCG-TTTGCTCTTTGTAAACACAGGAATGCCAAATCATCTTATATCT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * * *
39801909 GCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGTCTTCGATCTGCTCTCCATTGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * * *
39801974 GAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGAGGCCAAATCATCTCGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * ** *
39802039 TC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
131 TCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACA
* * * *
39802103 C-AGTAATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTAT
195 CAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAT
* * * * *
39802167 GTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGAC
259 GTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGAC
* * *
39802232 AATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCC-AAAGGTCAGATCTG
324 AATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTG
* ** * * * * ** * * *
39802296 CTACGTCTTCGAACTACT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGATTT
386 CTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCT
* * * * ** * * * * *
39802355 G-TTC--TCTG-ACA-ATACAGAGACCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAAC
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AAT
* * * * *
39802407 ACCT-GA-AGGTCAAATCTACTATGTCTTCGATTTGCTCT-TGTA-AACACA-AGAATGCCAAAT
64 A--TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAAT
* *
39802467 CAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTAT-TCTTCGAACTTC
122 CATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCG-A-TT-
* * ** * * *
39802528 T-CTCCATTG--AATA-TGGAGAT-CCAAATCTATTTCTTCGATTTG-TTC--TCTGACAATACA
180 TGCTTC-TTGTAAACACAAGA-ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACA
* * * * * * * * * * * *
39802585 --GAGATGG-CA-A-AT-C-A--TCTTGGATCT-AT-TCAGTGTAAACACTTGA-AGGTCAGATC
238 TCCA-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA-TGGAGATGCCAAATC
* * * *
39802638 TGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAAGCATCTTAGATCTGCTTC
300 TG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC
* * * * * * * **
39802700 -GATGTGAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-TGG
359 AG-TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAG
* * * *
39802761 AGATGCCAAATCTGTTTATTCGATTT
419 A-ATGCCAAATC---ATCTTGGATCT
* * * * * * ** * *
39802787 G-TTC--TCTGACAATAT--AGA-GACACCAAAT-C-A--TCTTGGATCTGCT-TCAGT-GTAAA
1 GCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AA
* * * * *
39802840 CACCT-GA-AGGTCAAATCTACTATGTCTATC-A-TT-TTCTCCTTGTA-AACACA-AGAATGCC
63 TA--TGGAGATGCCAAATCT-GT-T-TCT-TCGATTTGTTCT-C-TG-ACAATACAGAG-ATGCC
* *
39802898 AAATCAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATGTCTTCGAT
118 AAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCGAT
* * * ** * ** ** *
39802960 CTGC-TCTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTG-AAA-A
179 TTGCTTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACA
* * * * * * * * * * * *
39803018 TACAGAGATGCCA-A-AT-C-A--TCTTGGCTCTGCT-TCAGTGTAAACACCT-GA-AGGTC-GA
238 TCCA-A-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAA
* * * * **
39803073 TCTGCTATGTCTTCGATTTGCTC-CTGGTA-AACACA-AGAATGCCAAATAATATTGTTTCTGCT
298 TCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGC-
* * * * * * * *
39803135 TTGATGTGAAAACAACC-AAAGGTCAGATCTACTATGTCTTCCATCTGCT-CTCCGTCGAATATA
356 TTCA-GTGTAAAC-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT--AA-ACA
* * *
39803198 -AAG-CTGCCAAATCTATTTCTTTGATTT
415 CAAGAATGCCAAATC-A--TCTTGGATCT
* * * * * * * * *
39803225 G-TTC--TTTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--A
* * * * *
39803277 ACACCT-GA-AGGCCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCA
62 ATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCA
* * * * * *
39803337 AATCATCTT-GAACTTGATTCGATGTGAAAACATCC-AAAGCTCAGTTCTGCTATGTCTTCGATC
119 AATCATCTTGGATC-TGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-
* * ** * ** ** *
39803400 TT-C-TCTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATA
179 TTGCTTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-A
* * * * * * ** ** * * * * *
39803459 CA--GAGATGCCA-A-AT-C-A--TCTTAGATCCACT-TTAGAGCAAACACT-GA-AGGTCAGAT
236 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG-TCAAATA-TGGAGATGCCAAAT
* * ** * * *
39803513 CTGCTATGTTTTCGATCT-ACCCCTGTA-AACACA-AGAATGCCAAATCGTCTTGGATCTGCTTC
299 CTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC
* * * * * **
39803575 -GATGTAAAACATCC-AAAGGTCAGATCTGCTATATCTTCGATCTGTTCTCC--GTCGAATA-TG
359 AG-TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAA
* * *
39803635 GAGATGCCAAATCTGTTTCTTCGATAT
418 GA-ATGCCAAATC---ATCTTGGATCT
* * * ** * * * * * * * *
39803662 G-TTC--TCTGACAATATAGAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAAC
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AAT
* * * * ** * **
39803716 ACCT-GA-AGGTC-GATCTGCTATGTCTTCAATTTACTC-CTCGTA-AACACA-AGAATGGTAAA
64 A--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAA
* * * *
39803775 TCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAATGTCAGATCTGCTATGTCTTCGATCTGC
121 TCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGC
* * * ** * * * *
39803839 -TCTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--
183 TTCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATC
* * * * * * * * * *
39803897 GAGATGTCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAACACCTGAAG-T-CCAGATCT-
240 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG
* * * * *
39803952 TCAATGTCTTCGATTTCTCCT-TGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC-G
302 T---T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG
* * * * * * * * * **
39804013 ATGTGAAACATCCAG-AGGTCAGATCTTCAATGTATTAGATCTACT-CTCCGTCAAATA-TGGAG
361 -TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-
* ** *
39804075 ATGCCAAATCTGTTTCTTCAATCC
420 ATGCCAAATC---ATCTTGGATCT
* * * * * * * * *
39804099 GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTT-AATCCGCT-TCAGT-GTAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--A
* * * * *
39804150 ACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCA
62 ATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCA
* * * **
39804210 AATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGAT-TGCTATGTCTTCGATCA
119 AATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTT
** * * * *
39804273 GCTCTCCATTG-AATA-TGAAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATAC
181 GCT-T-C-TTGTAA-ACACAAGAATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-AC
* * * * * * * * * * * *
39804332 A--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAA-ACCT-GA-AGGTCAGAT
237 ATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAAT
* ** * *
39804385 CTGCTATGTCTTCAATTTGCCCT-TGTA-AACACA-AGAATGCCAAATCATCTTGAATCTGCTTC
299 CTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC
* * * * * * * **
39804447 -GTTATGCAAACATCC-AAAGGTTAGATCTGCTATG-CTTCGATCTGCT-CTCCGTCGAATA-TG
359 AG---TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAA
* *
39804507 GAGATGCCAAATCTGTTTCTTCGAT-T
418 GA-ATGCCAAATC---ATCTTGGATCT
** * * * * * * * *
39804533 TTTTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTG-T-TCAGT-GTAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AA
* * * * * * * **
39804585 AACCT-GA-AGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCGTCGAATATGGAGATGCCAAAT
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTGAC-AATACAGAGATGCC--A-
*
39804648 CTATTTATTCAATTTGTTCTCATATATGTAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAA
119 --A---A-TC-A-------TC---T-TG------------GATCTGCTTCAGTGTAAACACCTGA
* * *
39804713 AGGTCAGATCTGCTATGTCTTCGACTTGCTCCTTGTAAACACCAGAATG-CAAATCATCTTGGAT
154 AGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACACAAGAATGCCAAATCATCTTGGAT
* *
39804777 CTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCT-CTATGTCTTCGATCTACTCTCCGTCGAAT
219 CTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAAT
39804840 ATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC-TCTTG
284 ATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTG
39804904 GATCTGCTTCAGTGTAAA-ACCTGAA-GTCAGATCTGCTATG-CTTCGATTT-CTCCTTGTAAAC
349 GATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAAC
39804965 ACAAGAA-GCCAAATCATCTTGGATCT
414 ACAAGAATGCCAAATCATCTTGGATCT
*
39804991 GCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39805055 GGAGATGCCAAATC-GTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-AATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39805117 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTT-CTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39805181 AAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
39805244 CTTCGATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39805306 TACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39805371 TCTT-GATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
39805419 GCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
39805482 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39805547 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39805610 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39805675 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39805738 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39805802 TCTTCGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTGGA-CT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
39805850 GCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT-TT-GATCTGCTCTCCGTC-AATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39805910 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39805975 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTT-CTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
*
39806039 AAGAAT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39806103 CTTCGATCTACTCTCCGTCGAATATGGAGATGCC-AATCTGTTTCTTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39806167 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39806231 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
39806281 GCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39806344 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGA-ATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39806408 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTTC-ATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39806472 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39806537 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39806601 TACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
**
39806665 TCTTCGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTATATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39806714 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCAT-GAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
39806777 -GAGATGCCAAATCTGTTTCTT-GATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39806840 TCTACTT-AGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
*
39806904 AAGAATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39806967 CTTCGATCTACTCTCCGTCGAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39807030 TACAGAGATG-CAAATCATCTTGGATC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39807089 TCTTCGATTTGCT-CTTGTAAACAC-AGAATGCCAAATC-T-TTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * *
39807135 G-TTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTCGA-CTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
39807197 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39807262 TCTACTTCAGTGTAAACACCT-AAGGTCAGATCTGCTATGTCTTCGA-TTGC-TCCTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39807324 AAGAATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAACATCCAAAGGTCAGATCTGCTA-GT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39807385 CTTCGATCTACTCTCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTC-CTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39807448 TACAGAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTAT-
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39807509 TCTTCGATTTGCTCCTTGT-AAC-CAAGAATGCCAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
39807557 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * *
39807621 GGAG-TG-CAAATCTGTTTCTT--AATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGC
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39807682 TCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATG-CTTCGATTTGC-TCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
* *
39807744 AAGAATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * *
39807806 CTTCGATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39807870 TACAGAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39807934 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39807984 GCTTCGATGTGAAAACATCCAAAGGT-AGAT-TGCTATGTCTT-GATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* ***
39808046 GGAGATG-CAAATCTGTTTCTTC-AATCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39808109 TCCGCTTCAGAGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39808174 AAGAATG-CAAATCATCTTGGATCTGC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39808237 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39808300 TACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * * *
39808365 TCTTCAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39808415 GTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT-CTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
*
39808479 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39808544 TCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
39808609 AAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39808672 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39808737 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTAT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTAT
39808801 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CT
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
*
39808851 GCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT-CGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * * *
39808914 GGAGATGCCAAATCTGTTTCTTCAATTCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39808979 TCCGCTTCAGTGTAAACACCTGAA-GTCAAATCTGCTATGTCTTCGTTTTGC-TCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
**
39809042 -AGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* ** *
39809105 CTTCGATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * *
39809168 TACAGAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39809230 TTTTCGATTTGCT-CTTGTAAACAC-AGAATGCCAAATCAT-TTGGATCT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* * * * * * *
39809277 GCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
* * *
39809342 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39809407 TCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGAT
131 TCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT
39809457 CTACTCTCCG
Statistics
Matches: 15171, Mismatches: 1503, Indels: 1171
0.85 0.08 0.07
Matches are distributed among these distances:
417 6 0.00
418 94 0.01
419 100 0.01
420 175 0.01
421 109 0.01
422 152 0.01
423 73 0.00
424 133 0.01
425 111 0.01
426 143 0.01
427 250 0.02
428 469 0.03
429 286 0.02
430 280 0.02
431 424 0.03
432 361 0.02
433 307 0.02
434 426 0.03
435 575 0.04
436 445 0.03
437 646 0.04
438 433 0.03
439 2560 0.17
440 5592 0.37
441 156 0.01
442 84 0.01
443 66 0.00
444 15 0.00
445 15 0.00
446 25 0.00
449 1 0.00
450 3 0.00
451 5 0.00
452 4 0.00
455 4 0.00
456 1 0.00
457 10 0.00
458 8 0.00
459 5 0.00
460 12 0.00
461 18 0.00
462 20 0.00
463 48 0.00
464 10 0.00
465 40 0.00
466 28 0.00
467 68 0.00
468 47 0.00
469 26 0.00
470 44 0.00
471 55 0.00
472 26 0.00
473 52 0.00
474 46 0.00
475 21 0.00
476 24 0.00
477 29 0.00
478 4 0.00
479 1 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (440 bp):
GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
Found at i:39793039 original size:660 final size:659
Alignment explanation
Indices: 39791762--39826669 Score: 15318
Period size: 660 Copynumber: 53.3 Consensus size: 659
39791752 GGATGTCACA
*
39791762 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* ** * * *
39791827 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39791892 TCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCTCTTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* **
39791957 AAGAATGTCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * *
39792022 CTTCGATCTGCTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39792087 TACAGAGATGCCAAATCATCTTGGATTTGCTTTAGTGTAAACACCTAAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39792152 TCTTCAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
* * * *
39792217 CATCCAAAGGTTAGATCTGGTATGTCTTCGATCTGCTCTCCGTCGAATATGGGGATGACAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* * * *** * *
39792282 GGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTAGATCAAATTCTGAGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
** * *
39792347 ACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTAATGCCAAATC
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATC
*
39792411 ATTTTGGATCT
649 ATCTTGGATCT
* * * * * *
39792422 GATTCGACGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTCGATCTTCTCTCCATCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
39792487 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39792552 TCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCATGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* *
39792617 AAGAATG-CAAGATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACG
196 AAGAATGCCAA-ATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * *
39792681 TCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACA
260 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
** * * * *
39792746 ATACAGAGACACCAAATCATCTTGGATTTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACAAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39792811 TTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGCGAAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
39792876 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATTATGGAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAA-TATGGAGATGCCAAATC
** ** * * *
39792941 TGTTTCTTAAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGCTCTGCTTTAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
*
39793006 AACACCTGAAGGTCAGATCTGCTATGCCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
584 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39793071 ATCTTGTATCT
649 ATCTTGGATCT
* * * * * * *
39793082 GCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTCGATCTACCCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39793147 AGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCATATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39793212 TCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * *
39793277 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATTTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * ****
39793342 CTTCGATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * *
39793407 TACAGAGATGCCAAATCATGTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
** *
39793472 TCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCTTGGATCTGCATCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39793537 CATCCAAAGGTCAGATCTACTATGTCTTCGATCTGCTCTCCGTCAATTATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAA-TATGGAGATGCCAAATCT
* **** * * *
39793602 GTTTCTTCAATCCCCTCTCTGACAATAAAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * **
39793667 GCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39793732 TCTTGGATCT
650 TCTTGGATCT
* *
39793742 GCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39793807 GGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39793872 TGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * * *
39793937 AAGAATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39794002 CTTCGATCTCCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39794067 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * *
39794132 TCTTCGACTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39794197 CATCCAGAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39794262 GTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39794327 ACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
585 ACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39794391 ATCTTGGACCT
649 ATCTTGGATCT
*
39794402 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* ** * * *
39794467 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39794532 TCCGCTTCAGTGTAAACACCTGAAGATCAAATCTACTATGTCTTCGTTTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* ** * *
39794596 AGGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * *
39794661 CTTCGATCTGCTCTCCATTGAATATGAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * ** *
39794726 TACAGAGAGGCCAAATCATCTCGGATC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTAT
326 TACAGAGATGCCAAATCATCTTGGATCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39794790 GTCTTCGATTTGCTTCTTGTAAACAC-AGTAATGCCAAATCATTTTGGATCTGCTTCGATGTGAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAA
* * * * * * *
39794854 ATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAAT
454 AACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAAT
* *
39794919 CTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAATGT
518 CTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GT
* * * ** * * * * **
39794984 GAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGAACTACT-CTCCGTCGAATA-TGGAGATG
581 GTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATG
* * *
39795046 CCAAATCTGTTTCTTCGATTT
642 CCAAATC---ATCTTGGATCT
* * * * * * ** * * * * *
39795067 G-TTC--TCTG-ACA-ATACAGA-GACACCAAAT-C-A--TCTTGGATCTACT-TCAGTGTAAAC
1 GCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAAT
* * * * * *
39795121 ACCT-GA-AGGTCAAATCTACTATGTCTTCGATTTGCTCTTTGTA-AACACA-AGAATGCCAAAT
64 A--TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAAT
* * * *
39795182 CATTTTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATTTCTTCGAACTTC
122 CATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCG-A-TT-
* ** * * * *
39795245 T-CTCCATTG--AATA-TGGAGATTCCAAATCTATTTCTTCGATTTG-TTC--TCTGACAATACA
180 TGCTCC-TTGTAAACACAAGA-ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACA
* * * * * * * * * * * *
39795303 --GAGATGG-CA-A-AT-C-A--TCTTGGATCT-ATTTCAGT-GTAAACACTTGA-AGGTCAGAT
238 TCCA-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA-TGGAGATGCCAAAT
* * * *
39795356 CTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAAGCATCTTAGATCTGCTT
299 CTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTT
* * * * * * * *
39795418 C-GATGTGAGAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-T
358 CAG-TGT-A-AACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACA
* * * * * * * * * * * **
39795479 GGAGATGCCAAATCTGTTTATTCGATTTG-TTC--TCTGACAATAT--AGA-GACACCAAAT-C-
417 AGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCT
* * * * * * *
39795536 A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAAATCTACTATGTCTATC-A-TT-
477 ATGTCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCT-GT-T-TCT-TCGATTTG
* * *
39795593 TTCTCCTTGTA-AACACA-AGAATGCCAAATCATTTTGGATCTGCTTC-GATGTGAAATCGTCC-
534 TTCT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCT
* * * * ** *
39795654 AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTT
591 GAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---A
** *
39795717 TCTTCAATCC
650 TCTTGGATCT
* * * * * * * * * *
39795727 AC-TC--TCTG-AAA-ATACAGAGATGCCA-A-AT-C-A--TCTTGGCTCTGCT-TCAGTGTAAA
1 GCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * * *
39795780 CACCTGAAGGT-CC-GATCTGCTATGTCTTCGATTTGCTC-CTGGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAA
* * ** * * * * *
39795840 ATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAGGTCAGATCTACTATGTCTTCGATCTG
120 ATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * * * *
39795904 CT-CTCCGTCGAATATA-AAG-CTGCCAAATCTATTTCTTTGATTTG-TTC--TTTGACAATACA
182 CTCCT-TGT--AA-ACACAAGAATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACA
* * * * * * * * * * *
39795963 --GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGCCAGAT
238 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAAT
* * * *
39796016 CTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GAACTTGAT
299 CTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATC-TGCT
* * * * * *
39796077 TCGATGTGAAAACATCC-AAAGCTCAGTTCTGCTATGTCTTCGATCTT-CT-CTCCGTCAAATA-
357 TC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-TTGCTCCT-TGT-AAACAC
** * ** ** * * * * * *
39796138 TGGAGATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-
416 AAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTG
* ** ** * * * * * * * * *
39796195 C-A--TCTTAGATCCACT-TTAGAGCAAACACTTGA-AGGTCAGATCTGCTATGTTTTCGATCTA
475 CTATGTCTTCGATCTGCTCTCCG-TC-AATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTG
** * * * *
39796255 CCCCCTGTA-AACACA-AGAATGCCAAATCGTCTTGGATCTGCTTC-GATGTAAAAACATCC-AA
534 TTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT--AAACA-CCTGA
* * * * ** *
39796316 AGGTCAGATCTGCTATATCTTCGATCTGTTCTCC--GTCGAATA-TGGAGATGCCAAATCTGTTT
593 AGGTCAGATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC---AT
* *
39796378 CTTCGATAT
651 CTTGGATCT
* * * ** * * * * * * * * *
39796387 G-TTC--TCTGACAATATAGAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAACA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA
* * ** * ** * **
39796442 CCT-GA-AGGTCGGATCTGCTATGTCTTCAATTTACTC-CTCGTA-AACACA-AGAATGGTAAAT
65 --TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAAT
* * * *
39796502 CATCTTGGATCTGCTTCGATGTGAAAACATCC-AAATGTCAGATCTGCTATGTCTTCGATCTGCT
122 CATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
* * * ** * * * * *
39796566 -CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--G
184 CCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCC
* * * * * * * *
39796624 AGATGTCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCTGAAG-T-CCAGATCT-
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG
* * *
39796678 TCAATGTCTTCGA-TT-TTCTCCTTGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC
302 T---T-TCTTCGATTTGTTCT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC
* * * * * * * * * **
39796739 -GATGTGAAACCATCCAG-AGGTCAGATCTTCAATGTATTAGATCTACT-CTCCGTCAAATA-TG
359 AG-TGT-AAA-CA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAA
* ** * * * * * * *
39796800 GAGATGCCAAATCTGTTTCTTCAATCCGC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-
418 GA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCT
** * * * * * * *
39796856 A--TCTTAAATCCGCT-TCAGTGTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGC
477 ATGTCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGT
* * * *
39796916 TC-CTTGTA-AACACA-AGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAA
535 TCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA
* ** ** *
39796977 GGTCAGATTTGCTATGTCTTCGATCAGCTCTCCATTG-AATA-TGAAG-ATGCCAAATCTGTTTC
594 GGTCAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAA-ACACAAGAATGCCAAATC---ATC
* *
39797039 TTCGATTT
652 TTGGATCT
* * * * * * * * * *
39797047 G-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * * * * *
39797100 AACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTG-CCCCTTGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAA
* * * * * *
39797160 ATCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AAAGGTTAGATCTGCTATGCCTTCGATCT
120 ATCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTT
* * * ** * * ** *
39797223 GCT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGAT-TTTTTC--TCTGACAATACA
181 GCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-AC-
** * * * * *
39797283 GAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAAAACCTGAAGGTCAGATCTGCTATGTCTT
237 ---AT-CCAAA-GGTC--AGATCTG-CT-A-TGT------CT-----TC-GATCTGCTCT-CCGT
* *** * ** ** * * * * *** * *
39797348 CG-ATCT-GTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-TTCT-CATATA
279 CGAATATGGAGAT--G-CCAA-AT-CTG-TTTC--TTCGATTTGTTC--TCTGACAATACAGAGA
** * * *
39797409 TGTAAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCGAC
334 TGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGAT
*
39797474 TTGCTCCTTGTAAACACCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAA
399 TTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAA
* * *
39797538 GGTCATATCTACTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTC
464 GGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC
*
39797603 GATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAGTGTAAA-ACCTGA
528 GATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGA
* * * *
39797667 AGATCAGATCTGCTATGCCTTCGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGAT
593 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGAT
39797732 CT
658 CT
* * *
39797734 GCTTCGATGTGAACACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * * *
39797799 GGAGATGCCAAATCCGTTTCTTTGATTTGTTCTGTGACAATACAGAGATGCCAAGTCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39797864 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* *
39797929 AAGAATGCCAAATCATTTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * *
39797994 CTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCTATTTGTTCACTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
** * * *
39798059 TACAGAGACACCAAATAATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * *
39798124 TCTTTGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGATAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39798189 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTTTCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39798254 GTTTCTTCGATTTGTTCTCTAACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * * * *
39798319 ACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTCGTAAACACAAGAATTCTAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39798384 TCTTGGATCT
650 TCTTGGATCT
* *
39798394 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39798459 GGAGATGCTAATTCTGTTTTTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39798524 TCTGCTTCAGTGTAAACTCCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
* * * * *
39798588 CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * * *
39798653 TATTAGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
*
39798718 ATACAGAGATGCCAAATAATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * * * *
39798783 GTCTTCAATTTTCTCCTCGTAAACACAAGAATTCTAAATCATCTTGGATCTGCTTCGATGTGAAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
* * * *
39798848 ACATCCAAAGGTCAGATCTGCTATGACTTCGATCTACTCTCCGTCGAATATGGAGATGCTAATTC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATC
39798913 TGTTT-TTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
* *
39798977 AACTCCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACACAAGAATGCCAAAT
584 AACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAAT
*
39799041 CATCTTGGACCT
648 CATCTTGGATCT
* * * * * *
39799053 GCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTAGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* *
39799118 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAAATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * * *
39799183 TCTGCTTCAGTGTAAACTCCTAAAGGCCAGATCTACTAAGTCTTCAATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* *
39799248 AAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * ** *
39799313 CTTCGATCTGCTCTCCGTCAAATATGGAGAAGCCAAATCTGTCTCTTCAATCCGCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * *
39799378 TACGGAGATGCCAAATCATCTTAGATCCGCTTCAATGTAAACACCTGAAGGTCAAATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* **
39799443 TCTTCGTTTTGCT-CTGTGTAAACACAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAA
391 TCTTCGATTTGCTCCT-TGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
* * * * * *
39799507 ACATCCAAAGGTCAAATCTGCTATGCCTTCGATCTGCTTTCCATTGAATATGAAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCC-GTCAATATGGAGATGCCAAATC
* * *
39799572 TGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTTAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
* *
39799637 AACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACACAAGAATGCCAAATC
584 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39799702 ATCTTGAATCT
649 ATCTTGGATCT
* * * *
39799713 GCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* ** * *
39799778 GGGGATAACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*** * ** * *
39799843 TCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * * * *
39799908 -AGTAATGCCAAATCGTTTTGGATCTGATTCGACGTGAAATCATCCAAAGGTCAGATCTGCTATG
196 AAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * * *
39799972 TCTTCGACCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* *
39800037 ATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTAAAGGTCAGATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * * * *
39800102 GTCTTCGAGTTGCTCCATGTAAACACAAGAATGCCAGATCATCTTAGATCTGCTTCGACGTGAAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
* * *
39800167 ACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATC
* ** *
39800232 TGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATTTGCTTCAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
* * * * *
39800297 AACACCTGAAGGTCAAATCTACTATTTCTTCGATTTGCTCCTTGTAACCATAAGAATGCCAAATC
584 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
39800362 ATCTTGGATCT
649 ATCTTGGATCT
*
39800373 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATTAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * ** ** * *
39800438 GGAGTTGGCAAATCTGTTTCTTAAATCCGCTCTCT-ACAATACAGAGATGCCAAATCATCTTGGC
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39800502 TCTGCTTCAATGTAAACACCTGAAGGTCAGATCTGCTATGCCTTCGATTTGCTACTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * * * *
39800567 AAGAATGCCAAATCATCTTGTATCTGCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * *
39800632 CTTCGATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39800697 TACAGAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39800762 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
* *
39800827 CATCCAAAGGTTAGAT-TGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGTCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* **** * *
39800891 GTTTCTTCAATCCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * **
39800956 GCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39801021 TCTTGGATCT
650 TCTTGGATCT
* *
39801031 GCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39801096 GGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * * *
39801161 TGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * * *
39801226 AAGAATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39801291 CTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39801355 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * *
39801420 TCTTCGACTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39801485 CATCCAGAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39801550 GTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39801615 ACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
585 ACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39801679 ATCTTGGACCT
649 ATCTTGGATCT
*
39801690 GCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* ** * * *
39801755 GGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39801820 TCCGCTTCAGTGTAAACACCTGAAGATCAAATCTGCTATGTCTTCG-TTTGCTCTTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* ** * *
39801884 AGGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * *
39801949 CTTCGATCTGCTCTCCATTGAATATGAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * ** *
39802014 TACAGAGAGGCCAAATCATCTCGGATC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTAT
326 TACAGAGATGCCAAATCATCTTGGATCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39802078 GTCTTCGATTTGCTTCTTGTAAACAC-AGTAATGCCAAATCATTTTGGATCTGCTTCGATGTGAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAA
* * * * * * *
39802142 ATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAAT
454 AACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAAT
* *
39802207 CTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAATGT
518 CTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GT
* * * ** * * * * **
39802272 GAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGAACTACT-CTCCGTCGAATA-TGGAGATG
581 GTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATG
* * *
39802334 CCAAATCTGTTTCTTCGATTT
642 CCAAATC---ATCTTGGATCT
* * * * ** * * * * * *
39802355 G-TTC--TCTG-ACA-ATACAGAGACCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAACA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA
* * * * *
39802408 CCT-GA-AGGTCAAATCTACTATGTCTTCGATTTGCTCT-TGTA-AACACA-AGAATGCCAAATC
65 --TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATC
* *
39802468 AT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTAT-TCTTCGAACTTCT
123 ATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCG-A-TT-T
* ** * * *
39802529 -CTCCATTG--AATA-TGGAGAT-CCAAATCTATTTCTTCGATTTG-TTC--TCTGACAATACA-
181 GCTCC-TTGTAAACACAAGA-ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACAT
* * * * * * * * * * *
39802585 -GAGATGG-CA-A-AT-C-A--TCTTGGATCT-AT-TCAGT-GTAAACACTTGA-AGGTCAGATC
239 CCA-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA-TGGAGATGCCAAATC
* * * *
39802638 TGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAAGCATCTTAGATCTGCTTC
300 TG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC
* * * * * * * **
39802700 -GATGTGAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-TGG
359 AG-TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAG
* * * * * * * * * * **
39802761 AGATGCCAAATCTGTTTATTCGATTTG-TTC--TCTGACAATAT--AGA-GACACCAAAT-C-A-
419 A-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTAT
* * * * * * *
39802817 -TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAAATCTACTATGTCTATC-A-TT-TT
479 GTCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCT-GT-T-TCT-TCGATTTGTT
* * *
39802875 CTCCTTGTA-AACACA-AGAATGCCAAATCAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AA
536 CT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGA
* * * ** *
39802935 AGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTC
593 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATC
** *
39802998 TTCAATCC
652 TTGGATCT
* * * * * * * * * *
39803006 AC-TC--TCTG-AAA-ATACAGAGATGCCA-A-AT-C-A--TCTTGGCTCTGCT-TCAGTGTAAA
1 GCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * * *
39803059 CACCT-GA-AGGTC-GATCTGCTATGTCTTCGATTTGCTC-CTGGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAA
* * ** * * * * * *
39803118 ATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAGGTCAGATCTACTATGTCTTCCATCTG
120 ATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * * * *
39803182 CT-CTCCGTCGAATATA-AAG-CTGCCAAATCTATTTCTTTGATTTG-TTC--TTTGACAATACA
182 CTCCT-TGT--AA-ACACAAGAATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACA
* * * * * * * * * * *
39803241 --GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGCCAGAT
238 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAAT
* * * *
39803294 CTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GAACTTGAT
299 CTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATC-TGCT
* * * * * *
39803355 TCGATGTGAAAACATCC-AAAGCTCAGTTCTGCTATGTCTTCGATCTT-CT-CTCCGTCAAATA-
357 TC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-TTGCTCCT-TGT-AAACAC
** * ** ** * * * * * *
39803416 TGGAGATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-
416 AAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTG
* ** ** * * * * * * *
39803473 C-A--TCTTAGATCCACT-TTAGAGCAAACACT-GA-AGGTCAGATCTGCTATGTTTTCGATCT-
475 CTATGTCTTCGATCTGCTCTCCG-TC-AATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTG
** * * * *
39803531 ACCCCTGTA-AACACA-AGAATGCCAAATCGTCTTGGATCTGCTTC-GATGTAAAACATCC-AAA
534 TTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAA
* * * * ** *
39803592 GGTCAGATCTGCTATATCTTCGATCTGTTCTCC--GTCGAATA-TGGAGATGCCAAATCTGTTTC
594 GGTCAGATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC---ATC
* *
39803654 TTCGATAT
652 TTGGATCT
* * * ** * * * * * * * * *
39803662 G-TTC--TCTGACAATATAGAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAACA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAATA
* * * * ** * **
39803717 CCT-GA-AGGTC-GATCTGCTATGTCTTCAATTTACTC-CTCGTA-AACACA-AGAATGGTAAAT
65 --TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAAT
* * * *
39803776 CATCTTGGATCTGCTTCGATGTGAAAACATCC-AAATGTCAGATCTGCTATGTCTTCGATCTGCT
122 CATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
* * * ** * * * * *
39803840 -CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--G
184 CCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCC
* * * * * * * *
39803898 AGATGTCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCTGAAG-T-CCAGATCT-
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG
* * * * *
39803952 TCAATGTCTTCGATTTCTCCT-TGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC-G
302 T---T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG
* * * * * * * * * **
39804013 ATGTGAAACATCCAG-AGGTCAGATCTTCAATGTATTAGATCTACT-CTCCGTCAAATA-TGGAG
361 -TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-
* ** * * * * * * *
39804075 ATGCCAAATCTGTTTCTTCAATCCGC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--
420 ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
* * * * * * * *
39804129 TCTT-AATCCGCT-TCAGTGTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCTC-
480 TCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* * * *
39804189 CTTGTA-AACACA-AGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGT
538 C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGT
** ** * *
39804251 CAGAT-TGCTATGTCTTCGATCAGCTCTCCATTG-AATA-TGAAG-ATGCCAAATCTGTTTCTTC
597 CAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAA-ACACAAGAATGCCAAATC---ATCTTG
*
39804312 GATTT
655 GATCT
* * * * * * * * * *
39804317 G-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * ** *
39804370 -ACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTGCCCT-TGTA-AACACA-AGAATGCCAAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAA
* * * * *
39804429 TCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AAAGGTTAGATCTGCTATG-CTTCGATCTG
121 TCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * ** * * ** *
39804491 CT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGAT-TTTTTC--TCTGACAATACAG
182 CTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-AC--
** * * * * *
39804551 AGATGCCAAATCATCTTGGATCTGTTCAGTGTAAAACCTGAAGGTCAGATCTGCTATGTCTTCG-
237 --AT-CCAAA-GGTC--AGATCTGCT-A-TGT-----CT-----TC-GATCTGCTCT-CCGTCGA
* *** * ** ** * * * * *** * *
39804615 ATCT-GTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-TTCT-CATATATG-
282 ATATGGAGAT--G-CCAA-AT-CTG-TTTC--TTCGATTTGTTC--TCTGACAATACAGAGATGC
* * * *
39804676 TAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCGACTTG
337 CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
*
39804741 CTCCTTGTAAACACCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGT
402 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGT
*
39804805 CA-ATCT-CTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGAT
467 CAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTCGAT
39804868 TTGTTCTCTGACAATACAGAGATGCCAAATC-TCTTGGATCTGCTTCAGTGTAAA-ACCTGAA-G
531 TTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGG
39804930 TCAGATCTGCTATG-CTTCGATTT-CTCCTTGTAAACACAAGAA-GCCAAATCATCTTGGATCT
596 TCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCT
* *
39804991 GCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
*
39805055 GGAGATGCCAAATC-GTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-AATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39805117 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTT-CTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39805181 AAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
39805244 CTTCGATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39805306 TACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39805371 TCTT-GATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39805433 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
39805497 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39805562 ACACCTGAAGGTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACACAAGAATGCCAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39805625 TCTTGGATCT
650 TCTTGGATCT
*
39805635 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
39805700 GGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39805763 TCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTTCGATTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39805826 AAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39805888 -TT-GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39805950 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39806015 TCTTCAATTT-CTCCTTGTAAACACAAGAAT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39806078 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCC-AATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
39806142 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39806207 ACACCTGAA-GTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39806271 TCTTGGATCT
650 TCTTGGATCT
39806281 GCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
*
39806344 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGA-ATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39806408 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTTC-ATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39806472 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * *
39806537 CTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39806601 TACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
**
39806665 TCTTCGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
* *
39806729 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCATGAATAT-GAGATGCCAAATCTG
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATATGGAGATGCCAAATCTG
*
39806792 TTTCTT-GATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTT-AGTGTAAA
521 TTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA
* *
39806855 CACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACACAAGAATGCCAAATCAT
586 CACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCAT
39806920 CTT-GATCT
651 CTTGGATCT
* * *
39806928 GCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
39806992 GGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACAGAGATG-CAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39807054 TC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATGTCTTCGATTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39807113 -AGAATGCCAAATC-T-TTGGATCTG-TTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39807173 CTTCGA-CTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39807237 TACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39807301 TCTTCGA-TTGCTCC-TGTAAACACAAGAATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39807361 CATCCAAAGGTCAGATCTGCTA-GTCTTCGATCTACTCTCCGTCGAATAT-GAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39807424 GTTTCTTCGATTTGTTC-CTGACAATACAGAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
*
39807486 ACACCTGAAGGTCA-ATCTACTAT-TCTTCGATTTGCTCCTTGT-AAC-CAAGAATGCCAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39807547 TCTTGGATCT
650 TCTTGGATCT
39807557 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * * *
39807621 GGAG-TG-CAAATCTGTTTCTT--AATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGC
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39807682 TCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATG-CTTCGATTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* *
39807744 AAGAATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39807806 CTTCGATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39807870 TACAGAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39807934 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39807999 CATCCAAAGGT-AGAT-TGCTATGTCTT-GATCTGCTCTCCGTCAAATATGGAGATG-CAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* *** * *
39808060 GTTTCTTC-AATCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39808124 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39808188 TCTTGGATCT
650 TCTTGGATCT
*
39808198 GC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
*
39808262 GGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39808325 TCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * * *
39808390 AAGAATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39808455 CTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * *
39808519 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATT
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39808584 TCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39808648 CATCC-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39808712 GTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39808777 ACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
585 ACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
39808841 ATCTTGGA-CT
649 ATCTTGGATCT
39808851 GCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT-CGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * * *
39808914 GGAGATGCCAAATCTGTTTCTTCAATTCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * *
39808979 TCCGCTTCAGTGTAAACACCTGAA-GTCAAATCTGCTATGTCTTCGTTTTGCT-CTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
**
39809042 -AGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39809105 CTTCGATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * *
39809168 TACAGAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* *
39809230 TTTTCGATTTGCT-CTTGTAAACAC-AGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
* * * * * *
39809292 CGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* * *
39809357 GTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGT
* * * * * * * **
39809422 AAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-TGGAGATGCC
583 AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCC
* * *
39809484 AAATCTGTTTCTTCGATTT
644 AAATC---ATCTTGGATCT
* * * * * * * * *
39809503 G-TTC--TCTGACAATACA--GAGATGG-CA-A-AT-C-A--TCTTGGATCT-ATTTCAGTGTAA
1 GCTTCGATGTGA-AA-ACATCCA-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAA
* * * * * * *
39809555 ACACTTGA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAA
62 ATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAA
* * * * *
39809616 ATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTA-GTCTTCGATCTA
120 ATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * ** ** * * * * * * *
39809679 CT-CTCCGTCAATA-TGGAGATGCCAAATTGTTTATTCGATTTG-TTC--TCTGACAATAT--AG
182 CTCCT-TGTAAACACAAGA-ATGCCAAA-T-CATCTTGGATCTGCTTCGATGTGAAAACATCCAA
* * ** * * * * * *
39809737 A-GACACCAAAT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAAATCTAC
243 AGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT-G
* *
39809793 TATGTCTATC-A-TT-TTCTCCTTGTA-AACACA-AGAATGCCAAATCATTTTGGATCTGCTTC-
302 T-T-TCT-TCGATTTGTTCT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCA
* * * * * **
39809852 GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGG
360 G-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAG
* ** ** * * * * * *
39809914 AGATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A
419 A-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTA
* * * * * * * * *
39809970 --TCTTGGCTCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCT
478 TGTCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * * ** * * *
39810030 C-CTGGTA-AACACA-AGAATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAG
536 CTCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAG
* * * * * *
39810091 GTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATATAAG-ATGCCAAATCTATTTCTTT
595 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGAATGCCAAATC-A--TCTTG
*
39810154 GATTT
655 GATCT
* * * * * * * * * *
39810159 G-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * *
39810212 CACCT-GA-AGGCCAGATCTGCTATGTCTTCGATTTGCTC-CTGTA-AACACA-AGAATGCCAAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAA
* * *
39810272 TCGTCTTGGATCTGCTTC-GATGTAAAACATCC--AAAGTCAGATCTGCTAT-TCTTCGATCTGT
121 TCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG-
* * ** * * * *
39810333 CTCC--GTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGATATG-TTC--TCTGACAATACA--
182 CTCCTTGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATC
* * * * * * * * * * * *
39810390 GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGTCAGATCT
240 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT
** *
39810445 GCTATGTCTTC-ATTTACTC-CTCGTA-AACACA-AGAATG-CAAATCATCTTGGATCTGCTTCG
301 G-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-
* * * * * * **
39810505 ATGTGAAAACATCC--AAAGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGA
359 A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * * * *
39810566 GATGCCAAATCTGTTTATTTGATTTG-TTC--TCTG-ACA-ATACAGAGATGCA-A-AT-C-A--
420 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGT-CAGATCTGCTATG
* * * * * *
39810620 TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-A-GTCAGATCT-TCATGTCTTCGA-TT-TTCT
480 TCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTGT--T-TCTTCGATTTGTTCT
* * *
39810678 CCTTGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC-GATGTGAAACATCC--AAGG
538 -C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGG
* * * * * * ** * **
39810738 TCAGATCTGCTATGT-TTAGATCTACT-CTCCGTCAATA-TGGAGATGCCAAATCTGTTTCTTCA
596 TCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTAAACACAAGA-ATGCCAAATC---ATCTTGG
*
39810800 ATCC
656 ATCT
* * * * * * * * * *
39810804 GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTT-AATCCGCT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * *
39810856 CACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAA
* * * * *
39810916 ATCATCTTAGATCTGCTTCGATGTGAAAACATCTAAAGGTCAGATCTGCTATGTCTTCGATCTGC
120 ATCATCTTGGATCTGCTTC-A-GTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG-
* ** * * * *
39810981 TCTCCATTG--AATATGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--
182 -CTCC-TTGTAAACACAAGAATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATC
* * * * * * * * * * * *
39811038 GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAAACCT-GA-AGGTCAGATCTG
240 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AATA--TGGAGATGCCAAATCTG
* ** *
39811093 TATGTCTTCAATTTGCCCT-TGTA-AACACA-AGAATGCCAAATCATCTTGGATCTGCTTC-GAT
302 T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-T
* * * * * **
39811154 GCAAACATCC-AAAGGTTAGATCTGCTATG-CTTCGATCTGCTCTCCGTTG--AATA-TGGAGAT
362 GTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAAACACAAGA-AT
* * ** * ** * *
39811214 GCC-AA--ATC-T-G-T-TTCTTCGATTTG--TTC-TCTACAA--TACAGAGATGCCAAATCATC
422 GCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCA-AAGGT-CAGATCTG-C-TAT-GTC
* * * * * * * * **
39811267 TTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTACTC-CT
482 TTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT
* * * * *
39811328 CGTA-AACACA-AGAATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCA
540 -G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCA
* * * * * ** * * * *
39811390 GATCTGCTATGTCTTTGATCTGCT-CTCCGTCGAATA-TGGAGATGCCAATTCTGTTTTTTCGAT
599 GATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGAT
*
39811453 TT
658 CT
* * * * * * * * *
39811455 G-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * *
39811508 CACCTGAAG-T-CCAGATCTGCTATGTCTTCGATTTGCTCT-TGTA-AACACA-AGAATGCCAAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAA
* *
39811568 TCATCTTGGA-CTGCTTC-GATGTGAAACACC-AAAGGTCAGATCTGC-ATGTCTTCGATCTGCT
121 TCATCTTGGATCTGCTTCAG-TGT-AAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
* * ** * * * * *
39811629 -CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--G
184 CCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCC
* * * * * * * * *
39811687 AGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-A-GGCAGATCTG
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG
* * *
39811741 CTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTTGGACCTGCTTCGA
302 -T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A
* * * * **
39811803 TGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTGCATTG--AATA-TGGA
360 -GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTC--C-TTGTAAACACAAGA
** * * * * * * *
39811864 GATGGTAAATATATTTCTTTGATTTG-TTC--TCT-AACA-AT--ACA-G--AGAT-TGCAAATC
420 -ATGCCAAAT-CA--TCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGC-TAT-
* * * * * *** * * * * * * *
39811918 ATCTTGGATCTGCT-TCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTC
479 GTCTTCGATCTGCTCTC--CGTCAATATGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC
* * ** * ** ** * * * *
39811982 CGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTC--TG-ACAATA-CAGAGATGC
539 TGAC-AATACAGAGATGCCAAATC---ATCTTGGATCTGCT-TCAGTGTA-AACACCTGA-AGGT
* * * * ** * * * *
39812043 CAAATCAT-CT-TGGC-TC----TGCTTCATGTAAACACCTGAAGGTCAGATCTGCTATGTCTTC
597 CAGATC-TGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCA-A-AT-C-A--TCTTG
*
39812101 GATTT
655 GATCT
* * * * * * * *
39812106 GC-TC-CTG-GTAAACA--CAAGATGCCA-A-AT-C-A--TCTTTGATCTGCT-TCGATGTAAAA
1 GCTTCGATGTGAAAACATCCAA-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTC--CGT-CAA
* ** * * * * * *
39812159 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTGGTA-AACACA-AGATGCCAAAT
62 ATATGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAGATGCCAAAT
* * * *
39812221 CATCTTTGATCTGCTTC-GATGTAAAAACATCC-AAAGGTCAGATCTACTATATCTTCGATCTT-
122 CATCTTGGATCTGCTTCAG-TGT--AAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-TTG
* * * ** * ** *
39812283 CT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCAATC-GC-TC--TCTGACAATACA-
182 CTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACAT
* * * * * * * * * *
39812341 -GAGATGCCA-A-AT-C-A--TCTTAGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAAATC
239 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATC
* * **
39812395 TGCTATGTCTTCGATTTGCTCT-TGTA-AACACA-AGAATGCCAAATCATCTTATATCTGCTTCG
300 TG-T-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-
* * * * **
39812457 ATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTG--AATA-TGG
359 A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAAACACAAG
* * * * * * * * *
39812518 AGATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A
419 A-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTA
* * * * * * * *
39812574 --TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGAT-TGCTATGTCTTC-ATTTGCT
478 TGTCTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * *
39812632 C-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAG
536 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
* * * * ** * *
39812692 GTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGAGATG-CAAATCTGTTCTTC
595 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC--ATCTTG
*
39812754 GATTT
655 GATCT
* * * * * * ***
39812759 G-TTC--TCTGACAATACA--GAGATGTCA-A-AT-C-A--TCTTGGATCAT--TCAGAGT-AAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATC-TGCTCTCCGTCAAA
* * * * * * *
39812810 CAT--A-AGGTCAGATCTGCTATGTCTTCGATTTGCTCT-TG-TAACACAGA-ATGCCAAATCAT
63 TATGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
* *
39812869 -TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATGTCTTCGATCTT-CT-
125 CTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCGAT-TTGCTC
** * * ** * * * * * *
39812929 CTCCATCAATATGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGA
185 CT-TGTAAACACAAGAATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAA
* * * * * * * * * *
39812988 TGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCTA
244 GGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-
* *
39813043 TGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGT
303 T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GT
* * * * * * ** * *
39813105 GAAAACATCC-AAAGGTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGA-ATATGAGATGC
362 GTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTAAACACAAGA-ATGC
* * * * * * * ** * *
39813167 CAAATCTTTTCTTCGAT-TTC-TC---CTG-ACA-ATACAGAGACCA-A-AT-C-A--TCTTGGA
424 CAAATC--ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGA
* * * * * * * *
39813219 TCTGCT-TCAGTGTAAACACCT-GA-AGGTC-AATCTACTATGTCTTCGATTTCTCCT-TGTA-A
487 TCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACA
* * *
39813278 ACACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTG
544 ATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTG
* * * ** * ** *
39813341 CTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTCAATCC
605 CTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCT
* * * * * * * * *
39813400 GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * * *
39813453 CACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAA
* *
39813513 ATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTC
120 ATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT-T-
* ** * * * *
39813577 T-CTCCGTTG--AATATGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA-
180 TGCTCC-TTGTAAACACAAGAATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACAT
* * * * * * * * * *
39813634 -GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTC-AATC
239 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATC
* * * *
39813687 TACTATGTCTTCGATTTCTCCT-TGTA-AACACA-AGAATGCCAAATCATCTTGGATCTGCTTCG
300 T-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-
* * * * * * **
39813749 ATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAATA-TGGAG
359 A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTAAACACAAGA-
* ** * * * * * *
39813811 ATGCCAAATC-TGTTTCTAATC-GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--T
420 ATGCCAAATCAT-CTT-GGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGT
* * * * * * * *
39813863 CTT-GGTCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC-C
481 CTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC
* * * *
39813923 TTGTA-AACACA-AGAATGCCAAATCATCTT-GATCTGCTTGATGTGAAAACATCC-AAAGGTCA
539 -TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCA-GTGTAAACA-CCTGAAGGTCA
* * * *
39813984 GATCTGCTATGTCTTCGATCTCT-CTCC--GTCGAATA-TAGAGATGCCAAATCTATTTCTTTGA
599 GATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC-A--TCTTGGA
*
39814045 TTT
657 TCT
* * * * * * * * *
39814048 G-TTC--TCTG-ACA-AT--ACA-G--AGA--TGCCAATCATCTTGGATCTACT-TCAGTGTAAA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTG-CTAT-GTCTTCGATCTGCTCTCCGT-CAAA
* * * * *
39814100 CACCT-GA-A-GGCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAA
63 TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAA
* * *
39814159 ATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAAGGTCA-ATCTGCTATGTCTTCGATCTG
120 ATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * ** * ** * * * *
39814221 CT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTCAATCTGC-TC--TCTGACAATA-CG
182 CTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCC
* * * * * * * * *
39814280 AGATGCCA-A-AT-C-A--TCTTAGATC-GCT-TCAGT-GTAAAACCT-GA-AGGTC-AATCTGC
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AATA--TGGAGATGCCAAATCTG-
* *
39814333 TATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GATCTGCTTCGAT
302 T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-
* * * * **
39814394 GTGAAAACATCC--AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATG--AATATGAG-AT
360 GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTG--CTCCTTGTAAACACAAGAAT
* * * * * * *
39814454 GCCAAATCTGTTTCTT-GATTTG-TTC--T-TG-ACA-ATACAGAATGCCA-A-AT-C-A--TCT
422 GCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCA-AAGGTCAGATCTGCTATGTCT
* * * * * * * * *
39814506 TGGATCTACT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTC-ATTTGCTC-CTT
483 TCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-T
* *
39814566 GTA-AACACA-AGAATGCCAAATCATCTTGGATCTGCTTC-GATGTGAAACATCC-AAAGGTCAG
540 G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGGTCAG
* * ** * *
39814627 ATCTGCTA-GTCTTCGATCTCT-CTCC--GTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGAT
600 ATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC---ATCTTGGAT
*
39814687 TT
658 CT
* * * * ** * * * *
39814689 G-TTC--TCTG-ACA-ATACAGAGACCA-A-AT-C-A--TCTTGGATCTGCT-TCATGT-AAACA
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATA
* * * * * *
39814741 CT-GA-AGGTC-AATCTACTATGTCTTCGATTTCTCCT-TGTA-AACACA-AGAATGCCAAATCA
65 -TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCA
* * *
39814800 TCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-C
124 TCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCC
* * ** * * * * *
39814863 TCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTT-AATC-GC-TC--TCTGACAATACA--GAG
186 T-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAA
* * * * * * * * *
39814920 ATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
243 AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T
* *
39814975 ATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTT-GATCTGCTTCGATG
303 -T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-G
* * * * * * **
39815036 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGAGAT
361 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-AT
* * * * * * * *
39815098 GCCAAATCTGTTTCTT-CATTTG-TTC--T-TGACAATACA--GAGATGCCA-A-AT-C-A--TC
422 GCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTC
* * * * * * * *
39815150 TTGGATCTACT-TCAGTGTAAACACCT-GA-A-GGCAGATCTGCTATGTCTTCGATTTGCTC-CT
482 TTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-
* * *
39815210 TGTA-AACACA-AGAATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTCA
539 TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCA
* * ** * *
39815271 GATCTGCTATGTCTTCGATCTCT-CTCC--GTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGA
599 GATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC---ATCTTGGA
*
39815332 TTT
657 TCT
* * * * * * * *
39815335 G-TTC--T-TGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAA
1 GCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAA
* * * * * ** *
39815387 CACT-GA-AGGTCAGATCTCTATGTCTTCGATTTACTC-CTTGTA-AACACA-AGAATGCCAAAT
63 TA-TGGAGATGCCAAATCTGT-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAAT
* * *
39815447 CATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT
122 CATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
* * * ** * * * *
39815511 -CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTT-GATTTG-TTC--TCTGACAATACA--G
184 CCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCC
* * * * * * * * * *
39815568 AGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTG
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG
* * *
39815623 CTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAATGCCAAATCATCTTGGACCTGCTTCGA
302 -T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A
* * * * * * **
39815685 TGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAATA-TGGAGA
360 -GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTAAACACAAGA-A
* ** * * * * * *
39815747 TGCCAAATCTGTTTCTTCAATC-GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--T
421 TGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGT
* * * * * *
39815800 CTT-GATCTGCT-TCAGTGTAAACACCT-GA-AGGTC-AATCTGCTATGTCTTCGATTTGCTC-C
481 CTTCGATCTGCTCTC--CGTCAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC
* * *
39815859 TTGTA-AACACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTC
539 -TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTC
* * * ** * *
39815921 AGATCTGCTATGTCTTCGATCTGCTCTCCATG--AATA-TGGAGATGCCAAATCTGTTTCTTCGA
598 AGATCTGCTATGTCTTCGATTTG--CTCCTTGTAAACACAAGA-ATGCCAAATC---ATCTTGGA
*
39815983 TTT
657 TCT
* * * * * * * * * *
39815986 G-TTC--TCTG-ACA-ATACAGAGATGCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAAC
1 GCTTCGATGTGAAAACATCCAAAGGT-CAGATCTGCTATGTCTTCGATCTGCTCTCCGT-CAAAT
* * * * *
39816039 ACCT-GA-AGGTCAGATCTGCTATGTCTTC-ATTTGCTC-CTTGTA-AACACA-AGAATGCCAAA
64 A--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATGCCAAA
* * *
39816098 TCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGC
121 TCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGC
* * * ** * * * *
39816161 T-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGAT
183 TCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTG--CT-T--CGAT-----G-T
* *
39816224 GCCAAATCATCTTGGATCATTCAGGTAAACACTAAGGTCAGATCTACTATGTCTTCGATTTGCTC
231 G---AA--A------A-CA-TC-------CA--AAGGTCAGATCTGCTATGTCTTCGATCTGCTC
* * * ** * * * * * * *
39816289 T-TGT-AAACACAGA-ATGCCAAATC---AT-TTGGATCTGCTTCATGTGAAACATCCA-A-AGG
274 TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTG-TTC-TCTGACA-ATACAGAGATG
* * * * * * * * *
39816345 TCAGATCTGCTATGTCTTCGATCT-CTCTC-CT-CAAATA--TGGAGATGCCAAATCTG-T-T-T
336 CCA-A-AT-C-A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGT
* * * *
39816402 CTTCGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTACTTC-A-GTGTA
392 CTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAA
* * * * * **
39816462 AACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTAAACA-CAAGAATGCCAA
454 AACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAATATGGAG-ATGCCAA
* * * * * * * * * *
39816524 ATC---ATCTTGGA--CGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAGTCTTCGAT
516 ATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-TCTTGGAT
* *
39816582 CT-CTCTC-GTCG---A-A--T-AAGATGCA-ATCT-C-ATGTCTTCGATTTACTCCTTGTAAAC
571 CTGCT-TCAGT-GTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAAC
39816635 ACAAGAATGCCAAATCATCTTGGATCT
633 ACAAGAATGCCAAATCATCTTGGATCT
39816662 GCTTCGATGTGAAAACAT-CAAAGGT-AGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* ** *
39816724 GGAGATGCCAAATCTGTTTCTT-AATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGG-
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
39816787 TCTGCTTCAGTGTAAACA-CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39816851 AAGAATGCCAAATCATCTT-GATCTGCTT-GATGTGAAAACA-CCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39816913 CTTCGATCTAC-CTCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTTGATTTGTTCT-TGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
*
39816975 TACAGAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39817039 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39817104 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATATGGAGATG-CAAATCT-
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATATGGAGATGCCAAATCTG
*
39817167 TTTCTTC-A--T-CT-TCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA
521 TTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA
39817227 CACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATCAT
586 CACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCAT
39817291 CTTGGATCT
651 CTTGGATCT
*
39817300 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
39817365 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAAATCATCTT-GA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39817428 T-TACTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
39817489 AAGAAT--CAAATCATCTTGGATCTG-TTC-ATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
39817550 CTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCT-TGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39817613 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA-CTGAAGGTCAGATCT-CTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
39817676 TCTTCGATTT-CTCCTTGTAAACAC-AGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39817738 CAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
*
39817801 GTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39817866 ACACCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
585 ACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
39817930 ATCTTGGA-CT
649 ATCTTGGATCT
39817940 G-TTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * * * *
39818004 GGAAATGCCAAATCTTTTTCTTC-AATCG-TCTCTGACAATACAGAGATGCCAAATCATCTT-AA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
*
39818066 TC-GCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGT-AACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
*
39818129 AAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39818193 CTTCGATCTGCTCTCCAT-GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
39818257 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39818321 TCTTC-ATTTGC-CCTTGTAAACACAAGAATGCCAAAT-A-C-T-CATCTGCTTCGA--TG-AAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
39818377 CATCCAAAGGT-AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* *
39818441 ATTTCTTC-ATTT-TTCTCTGACAATACAGATATGCCAAATCATCTTGGAT-TGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * * *
39818503 ACA--TTAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39818566 TCTTGGA-CT
650 TCTTGGATCT
* **
39818575 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
39818640 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39818705 TCTGCTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCCCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * ** * *
39818769 AAGAATGCCAAATTA-CCTCAATCTGCTTCGTTATG-AAACATCCAAAGGT-AGATCTGCTATG-
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
*
39818830 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTC-ATTT-TTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39818893 TACAGAGATGCCAAATCATCTTGGATCTGTTTCAATGTAAACACCTGAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
*
39818958 TCTTCGATCTGTTCTCCGTCAATATGGAGATGCCAAATCATTTATTCATTTGTTCTCAGATATG-
391 TCTTCGAT-T-TGCT-C--C--T-T---G-T---AAA-C----A--CA---------AGA-ATGC
* * * * * * *
39819022 TAAATCATCTTAGTTCTGCTTC-A-GTGTAAATA-CCTAAAGGTCAAATCTGCTATATCTTCGA-
424 CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGAT
* ** * * * * *
39819083 CTTGCTC-CTTGT-AA-ACTCAAGAATG-CAAATC---ATCTTGGATCTGCTTTGATGTGA-AA-
488 C-TGCTCTC-CGTCAATA-TGGAG-ATGCCAAATCTGTTTCTTCGATTTG--TT-CTCTGACAAT
* * * * * * * * * * *
39819139 ACATCCAAAGGTCATATCTGCTATGTCTTCGATCTACTTTCCGTCG--AATA--TGGAGATGCCA
546 ACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGC-TTCAGT-GTAAACACCT-GA-AGGTCA
* * * * *
39819200 -A-AT-CTATTTCTTCGATTTG-TTC-TCT-AACAATACAGAGATGCCAAATCATCTTGGATCT
599 GATCTGCTATGTCTTCGATTTGCTCCTTGTAAAC-ACA-AGA-ATGCCAAATCATCTTGGATCT
* * * * * * * *
39819258 GCTTC-A-GTGTAAAC-GCCTGAAGGTCAGATCTGCTATGTCTTCTATTTACTC-CTTGT-AAAC
1 GCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAAT
** * * * * * * * * * *
39819318 A-CAAGAACGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAACATCCA-A-AGGTCAGATCT
64 ATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACA-ATACAGAGATGCCA-A-AT
* * * * * * *
39819377 GCTATGTCTTCGATCTGCTCTCCGT-TGAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATT
122 -C-A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATT
* * * *
39819436 TG-TTCTCTG-ACAATAC-AGACATGCCAAATCATATTGGATCTGCTTC-A-GTGTAAACA-CCT
180 TGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-
* * * * * * ** * *
39819495 GAAGGTCAGATCTGCTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAACGCCAAATC---A
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATCTGTT
* * * * * * * * * *
39819554 TCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGCCTTCGATCTCCTC
304 TCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-AT--CTTGGATCTGCT-
* * * * * * * *
39819617 TCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTTTG-ACAATAC-A
357 TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTA-AACACAA
* * * * *
39819673 GAGATGCCAAATCATCTTGGATCTTCTTC-A-GTGTAAACAAT-TAAAGGTCAGATCTACTATTT
418 GA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAAC-ATCCAAAGGTCAGATCTGCTATGT
* * * * * ** * * ** *
39819735 CTTCGATTTACTC-CTTGTAAACA-CAAGAATGCCAAATC---ATCTTGGACCTGCTTCGATGTG
481 CTTCGATCTGCTCTC-CGTCAATATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTG
* * * * * * * * *
39819795 A-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTCCGTCG--AATA--TGGAGA
541 ACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-A
* * * * * *
39819854 TGCCAAATCTG-T-T-TCTTTGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGG
594 GGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGG
39819913 ATCT
656 ATCT
* * * * * * *
39819917 GCTTC-A-GTGTAAACA-CCTGAAGGCCAGATCTGGTATGTCTTCGATTTGCTC-CTTGT-AAAC
1 GCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAAT
** * * * ** * * * * *
39819977 A-AAAGAATGGCAAATC---ATCTTGGACCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAAATC
64 ATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCAAA--
* * * * * * * * *
39820036 TGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATGTGC--T-TCTTCAAT
121 T-C-A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGAT
* * * * * *
39820095 CTGCT-CTCTG-ACAATAC-GGAGATGCCAAATCATCTTAGATCCGCTTC-A-GTGTAAACA-CC
179 TTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC
* * * * * * * ** *
39820154 TGAAGGTCAAATCTGCTATGTCTTCGTTTTGCTCTTCGT-AAACA-CAAGGATGCCAAATC---A
241 -AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGA-GATGCCAAATCTGTT
** * ** * * * * * * * *
39820214 TCTTATATCTGCTTCGATGTA-AAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCT
304 TCTTCGATTTG-TTCTCTG-ACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-T
* * * * * * * *
39820278 CCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTTG-TTTG-TTCTCTG-ACAATAC-A
358 CAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAA
* * *
39820332 GATATGCCAAATCATCTTGGATCTGCTT-TA-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGT
418 GA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGT
* * * * * ** * *** * * *
39820394 CTTCAATTTGCTC-CTTGTAAACA-CAAGAATGCCAAATCATCTTGAATCTGCTTTG--ATGTGA
481 CTTCGATCTGCTCTC-CGTCAATATGGAG-ATGCCAAATC-TGTTTCTTC-GATTTGTTCTCTG-
* * *** * * * * * *
39820455 AAACATCCAAAGGTTAGAT-CTGGTAT-GTCTTTGATCTACTCTCCGTCG--AATA--TG-GGGC
541 ACA-AT--ACA-G--AGATGC-CAAATCATCTTGGATCTGCT-TCAGT-GTAAACACCTGAAGG-
* * * * * **
39820513 TGACAAATCTG--GT-TCTTCGATTT-ATTCTCTG-ACAATAC-AGAGATGTTAAATCATCTTGG
596 T--CAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGG
*
39820572 ATCA
656 ATCT
** * * *
39820576 AATTCAGA-GT-AAACAAAT--AAAGGTCAGATCTGCTATGTCTTCAATTTGC-C-CCTTGT-AA
1 GCTTC-GATGTGAAA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCC--GTCAA
* ** *** * * * * ** * * * *** **
39820634 ACA-CAAGAATGCCAAAT-TACCTCAATCTGCTTCGTTATGCAAAC-ATCCAAAGGTTAGATCTG
62 ATATGGAG-ATGCCAAATCTGTTTC-TTC-GATTTGTTCT-CTGACAATACAGAGATGCCAAAT-
** * * * * * *
39820696 CTATGCCTTCAATCTGCTCTCCGTCG--AATA--TGGAGATGCCA-A-AT-CTATTTCTTC-ATT
122 C-AT--CTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATT
* * * *
39820753 T--TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTT-TA-GTGTAAACA-CCT
180 TGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-
* * * * * * ** *
39820811 GAAGGTCAGATCTGCTATGTCTTCAATTTGCTC-CTTGT-AAACA-CAAGAATGCCAAATCATCT
241 AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-TGT
*** * * * * * *** * * *
39820873 TGAATCTGCTTTG--ATGTGAAAACATCCAAAGGTTAGAT-CTGGTAT-GTCCTCGATCTGCTCT
303 TTCTTC-GATTTGTTCTCTG-ACA-AT--ACA-G--AGATGC-CAAATCATCTTGGATCTGCT-T
* * * * * *
39820934 CCGTCG--AATA--TG--GGCTGACAAATCTG--GT-TCTTCGATTTG-TTCTCTG-ACAATAC-
358 CAGT-GTAAACACCTGAAGG-T--CAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACA
** * *** *
39820987 AGAGATGTTAAATCATCTTGTATCAAATTCAGA-GT-AAACAAAT--AAAGGTCAGATCTGCTAT
417 AGA-ATGCCAAATCATCTTGGATCTGCTTC-GATGTGAAA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * * *
39821048 GTCTTCGATTTGCT-TCTTGTAAACACAGTA-ATGCCAAATCATTTTGGATCTGCTTCGATGTGA
479 GTCTTCGATCTGCTCTC-CGTCAATA-TGGAGATGCCAAATC----T-G-T-TTCTTCGATTTG-
* * ** * * * * * *
39821111 AATCGTC-CA-AAGGT-CAGATCTG-C-TAT-GTCTTCGATCTTCTCTCCA-T-CAAATA--TGG
534 -TTC-TCTGACAA--TACAGAGATGCCAAATCATCTTGGATCTGCT-T-CAGTGTAAACACCT-G
* * * * * *
39821166 AGATGCCAAATCTG-T-T-TCATCGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCT
592 A-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCT
*
39821225 TGGATCC
653 TGGATCT
* * * * * *
39821232 ACTTC-A-GTGTAAACA-CTTAAAGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAAC
1 GCTTCGATGTGAAAACATC-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAAT
** * * * * * * * * *
39821292 A-CAAGAATGCCAAA--T-TATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATC
64 ATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-A
* * * *
39821351 TGCTACGTCTTCGATCTAG-TCTCCGTCG-AAA-A--TGAAGATGCCAAATCTG-T-T-TCTTCG
121 T-C-A--TCTTGGATCT-GCT-TCAGT-GTAAACACCTGAAG--GTCAGATCTGCTATGTCTTCG
* * *
39821408 ATTTGTTCAC-TG-ACAATACAGAGACA--CCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA
177 ATTTGCTC-CTTGTA-AACACA-AGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACA
* * * * * * * * **
39821467 -CCTGAAGGTCAAATCTACTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAATGCCAAATC
238 TCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATC
* * * * * * * * * *
39821528 ---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT
300 TGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCT
* * * * * * * *** *
39821588 GCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T-T-TCTT-AACCCGCT-CTCTG-ACAAT
354 GCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AAC
* * * * * * *
39821644 AC-AGAGATGCCATATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGCCATATCTACT
414 ACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCT
* * * * ** * * **
39821705 ATGTCTTCGATTTGCTC-CTTGTAAACA-CAAGAATGCCAAATC---ATCTTGGACCTGCTTCGA
477 ATGTCTTCGATCTGCTCTC-CGTCAATATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--
* * * * * * *** ** ** * * *
39821765 TGTGAAAACATCCAAAGGTTAGATCTGCTTGTCTTCTATCTGCTCTCCGT-CAAATA--TGGAGA
537 TCTG-ACA-ATACAGA-GAT-G-CCAAATCATCTTGGATCTGCT-TCAGTGTAAACACCT-GA-A
* * * * * * *
39821827 TGTCAAATCTG--GT-TCCTC-A-ATGC-CCTCTCTGACAATAC-AGAGATGCCAAATCATCTTG
594 GGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-A-AACACAAGA-ATGCCAAATCATCTTG
*
39821885 GATCC
655 GATCT
* * * * *
39821890 GCTTCAGA-GT--AAGCA-CCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTC-CTTGT-AAA
1 GCTTC-GATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAA
* ** ** * * * * * * * * *
39821949 CA-CAAGAATGGTAAATC---ATCTTGGATCTGCATCGATGTGA-AA-ACATCCAAAGGTCAGAT
63 TATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-
* * * * * * *
39822008 CTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TAGAGATGCCAAATCTG--AT-TCTTCG
120 AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCG
* * * * *
39822066 ATTTG-TTCTATGATAATACA-GAGAA-GCCAAATCATCTTGGATGTACTTC-A-GTGTAAACA-
177 ATTTGCTCCT-TG-TAA-ACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
* ** * * * * * * ** * *
39822125 CCTGAACTTCAGATCTGCTATGTCTTCAATTTACTC-CTTGT-AAACA-CAAGAATTCTAAATC-
239 CC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATCT
* * * * * * * * * *
39822186 --ATCTTAGATCTGTTTCAATCTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTC
301 GTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTG
* * * * * ** *
39822247 CTCTCCGTCG--AATA--TGGAGATACCAAATCTG-T-T-TCTTCGATTTG-TTTTTG-ACAATA
355 CT-TCAGT-GTAAACACCTGAAGGT--CAGATCTGCTATGTCTTCGATTTGCTCCTTGTA-AACA
* * ** *
39822303 C-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACAACTGAAGGTCAGATCTACTAT
415 CAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAT
* * * * * * ** * * ** *
39822365 TTCTTCGATTTACTC-CTTGTAAACA-CAAGAATGCCAAATC---ATCTTGGACCTGCTTCGATG
479 GTCTTCGATCTGCTCTC-CGTCAATATGGAG-ATGCCAAATCTGTTTCTTCGATTTG-TTC--TC
* * * * * * * *
39822425 TGA-AA-ACATCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCG--AATA--TGGAG
539 TGACAATACA-GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-
* * * * * *
39822484 ATGCCAAATCTG-T-T-TCTTTGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTG
593 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTG
*
39822543 GATAT
655 GATCT
* * ** * * *
39822548 GCTTC-A-GTGTAAACAGCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAAC
1 GCTTCGATGTGAAAACATCCAAAGGT-CAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAAT
** * * * * * * * * * *
39822608 A-CAAGAATGCCAAATC---ATCTTGGACCTGGTTCGATGTGA-AA-ACATCCAAAGGTCAGATC
64 ATGGAG-ATGCCAAATCTGTTTCTTCGA-TTTGTTC--TCTGACAATACA--GAGATGCCA-A-A
* * * * * * * *
39822667 TGCTATGTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T-T-TCTTCAAT
121 T-C-A--TCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGAT
** * ** * *
39822726 CCGCT-CTCT-TACAATAC-AGAGATGCCAAATCATCTTAAATCCGCTTC-A-GTGTAAACA-CC
179 TTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC
* * * * * **
39822785 TGAAGGTCAAATCTGCTATGTCTTTGATTTG--CTCC-TTGTAATCA-CAAGAATGCCAAATC--
241 -AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AAT-ATGGAG-ATGCCAAATCTG
* * * * * * * * * *
39822844 -ATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT-CTACTAT-GTCTTCGATCTGC
302 TTTCTTCGATTTG-TTC--TCTG-ACA-AT--ACA-G--AGATGCCA-AATCATCTTGGATCTGC
* * * * * * * *
39822906 TCTCCA-T-TGAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGTTTTG-TTCTCTG-ACAATA
356 T-T-CAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACA
*
39822962 C-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAAAC--CCTGAAGGTCAGATCTGCT
415 CAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCC-AAAGGTCAGATCTGCT
* * * * ** *** * * * *
39823022 ATGTCTTCAATTTGC-C-CCTTGTAAACA-CAAGAATGCCAAAT-TACCTCAATCTGCTTCGTTA
477 ATGTCTTCGATCTGCTCTCC--GTCAATATGGAG-ATGCCAAATCTGTTTC-TTC-GATTTGTTC
** * * * *** ** * * *
39823083 TGCAAAC-ATCCAAAGGTTAGATCTGCTATGCCTTCGATCTGCTCTCCGTCG--AATA--TGGAG
537 T-CTGACAATACAGAGATGCCAAAT-C-AT--CTTGGATCTGCT-TCAGT-GTAAACACCT-GA-
* * * * * * *
39823143 ATGCCA-A-AT-CTATTTCTTC-ATTT-TTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTG
593 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTG
39823201 GATCT
655 GATCT
* * * * * *
39823206 GTTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCATCGAATA
1 GCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATA
* * * * ** *
39823268 TGGAGATGCCAAATCTATTTATTCAATTTG---T-T--C--T-CAGATATGTAAAATCATCTTAG
65 TGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGG
* * * * * * *
39823324 TTCTGCTTCAGTGTAAACACCTAAAGGTCAAATATGCTATATCTTCGACTTGCTCCTTGTAAACT
130 ATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
* *
39823389 CCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCATATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * * *
39823453 TCTTCGATCTACTCTCCGTCGAATATGGAGATGCAAAATCTATTTCTTCGATTTGTTCTCTAACA
260 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
* * *
39823518 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACGCCTGAAGGTCATATCTGATAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* *
39823583 GTCTTCGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
*
39823648 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTTGAATATGGAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG-TCAATATGGAGATGCCAAATC
* *
39823713 TGTTTCTTCGATTTGCTCTCTGACAATACAGACATGCCAAATCATCTTGGATCTGCTTCAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
** * * *
39823778 AACAATTGAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATC
584 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
* *
39823843 ATCTTAGACCT
649 ATCTTGGATCT
* * * *
39823854 GCTTCGATGTTAAAACATCCAAAGGTCAGATTTGCTATGTCTTCGATCTCCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39823919 GGAGATGCCAAATCTGTTTCATCAATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
** * * * *
39823984 TCTGCTTCAGTGTAAACAATTGAAGGTCAAATCTACTATTTCTTCGATTTACTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * *
39824049 AAGAATGTCAAATCATCTTGGACCTGCTTCGATGTGTAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39824114 CTTCGATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *
39824179 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * * *
39824244 TCTTCGATTTGCTCCTTGTAAACAAAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAT
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
*
39824309 CATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* * ** * * * * *
39824374 GCTTCTTCAATCCGCTCTCTGACAATACGGAGATTCCAAATCATCTTAGATCCGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * *
39824439 ACACCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCT-CTTCGTAAACACAAGGATGCCAAATC
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTT-GTAAACACAAGAATGCCAAATC
**
39824503 ATCTTATATCT
649 ATCTTGGATCT
* * * * * * **
39824514 GCTTTGATGTAAAAACATCCAAAGGTCCGATCTACTATGTCTTCGATCTACTCTCCATTGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * * *
39824579 GAAGATGCCAAATCTGTTTCTTTGGTTTGTTCTCTGACAATACAGATATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39824644 TCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
* * *
39824709 AAGAATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * *
39824774 CTTCGATCTGCTCTCCGTCGAATATGG-GCTGACAAATCTGGTTCTTCGATTTGTTCTCTGACAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* *** * ** *
39824838 TACAGAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * * *
39824903 TCTTCGATTTGCTTCTTGTAAACAC-AGTAATACCAAATCATTTTGGATTTGCTTCGATGTGAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
* * * * * *
39824967 TCGTCCAAAGGTCAGATCTACTATGTCTCCGATCTTCTCTCCATCAAATATGGAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATC
* *
39825032 TGTTTGTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
*
39825097 AACACCT-AATGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAATACAAGAATGCCAAAT
584 AACACCTGAA-GGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAAT
39825161 CATCTTGGATCT
648 CATCTTGGATCT
* * *
39825173 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * **
39825238 GAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* * * *
39825303 TCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACAC
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
** * *
39825368 AAGAATGGTAAATCATCTTGGATATGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
196 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* *
39825433 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTATGATAA
261 CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
* * * * * *
39825498 TACAGAGAAGCCAAATCATCTTAGATGTACTTCAGTGTAAACACCTGAACGTCAGATATGCTATG
326 TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
* * * * * * *
39825563 TCTTCAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAA
391 TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
* *
39825628 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATACCAAATCT
456 CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCT
* * *
39825693 GTTTCTTCGATTTGTTTTTTGACAATACAGAGATGCCAGATCATCTTGGATCTGCTTCAGTGTAA
520 GTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * * * *
39825758 ACAACTGAAGGTCAGATCTACTATTTCTTCGATTTACTCATTGTAAACACAAGAATGCCAAATCA
585 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
*
39825823 TCTTGGACCT
650 TCTTGGATCT
*
39825833 GCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
*
39825897 GGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
* *
39825962 TATGCTTCAGTGTAAACACTTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
131 TCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACA
* * *
39826026 CAAGAATGGCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
195 CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATG
* * ** *
39826091 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACA
260 TCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACA
** * *
39826156 ATACAGAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTAT
325 ATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
* * *
39826221 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTTGATCTGAAA
390 GTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAA
* * *
39826286 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATATAGAGATGCCAAATC
455 ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCC-GTCAATATGGAGATGCCAAATC
* *
39826351 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCGTCTTGGATCTGTTTCAGTGTA
519 TGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
* * *
39826416 AAAACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAATC
584 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39826481 ATCTTGAATCT
649 ATCTTGGATCT
* * * * * *
39826492 GCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTCGATCTACTCTCCGTCAAATAT
1 GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
* * *
39826557 GGAGATGCCAAATCTATTTCTTCGATTTTTTCCCTGACAATACAGAGATGCCAAATCATCTTGGA
66 GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
** *
39826622 TCTATTTCAGTGTAAACACCTGAAGGTCAGGTCTGCTATGTCTTCGAT
131 TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGAT
39826670 CTGTTTTCCG
Statistics
Matches: 29115, Mismatches: 3328, Indels: 3610
0.81 0.09 0.10
Matches are distributed among these distances:
627 23 0.00
628 45 0.00
629 55 0.00
630 63 0.00
631 53 0.00
632 143 0.00
633 211 0.01
634 84 0.00
635 213 0.01
636 363 0.01
637 280 0.01
638 586 0.02
639 479 0.02
640 548 0.02
641 562 0.02
642 264 0.01
643 461 0.02
644 776 0.03
645 910 0.03
646 678 0.02
647 448 0.02
648 824 0.03
649 613 0.02
650 879 0.03
651 961 0.03
652 446 0.02
653 541 0.02
654 637 0.02
655 587 0.02
656 1092 0.04
657 437 0.02
658 1938 0.07
659 4393 0.15
660 6109 0.21
661 214 0.01
662 148 0.01
663 75 0.00
664 36 0.00
665 44 0.00
666 29 0.00
667 8 0.00
668 6 0.00
669 3 0.00
670 10 0.00
671 17 0.00
672 17 0.00
673 10 0.00
674 44 0.00
675 40 0.00
676 100 0.00
677 86 0.00
678 39 0.00
679 68 0.00
680 115 0.00
681 97 0.00
682 100 0.00
683 127 0.00
684 135 0.00
685 123 0.00
686 70 0.00
687 56 0.00
688 56 0.00
689 52 0.00
690 72 0.00
691 110 0.00
692 47 0.00
693 80 0.00
694 74 0.00
695 39 0.00
696 31 0.00
697 32 0.00
698 2 0.00
699 1 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (659 bp):
GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAT
GGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGA
TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACAC
AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAA
TACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATG
TCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAA
CATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAATATGGAGATGCCAAATCTG
TTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA
CACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCAT
CTTGGATCT
Found at i:39793295 original size:87 final size:89
Alignment explanation
Indices: 39793194--39793354 Score: 211
Period size: 89 Copynumber: 1.8 Consensus size: 89
39793184 CAATACAGAG
* * * *
39793194 ATGCCATATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGCCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCC-AAAGGCCAGATCTGCTATGTCTT
*
39793256 CGATTTGCTCCTTGTAAACACAAGA
65 CGATCTGCTCCTTGTAAACACAAGA
* ** *
39793281 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATTTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGCCAGATCTGCTATGTCTTC
39793346 GATCTGCTC
66 GATCTGCTC
39793355 TCCGTCAAAT
Statistics
Matches: 62, Mismatches: 9, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
87 23 0.37
88 1 0.02
89 36 0.58
90 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.32
Consensus pattern (89 bp):
ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGCCAGATCTGCTATGTCTTC
GATCTGCTCCTTGTAAACACAAGA
Found at i:39794393 original size:87 final size:89
Alignment explanation
Indices: 39794294--39794454 Score: 231
Period size: 89 Copynumber: 1.8 Consensus size: 89
39794284 CAATACAGAG
* * * *
39794294 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGT-CAAATCTGCTATGTCT
*
39794355 TCGATTTGCTCCTTGTAAACACAAGA
64 TCGATCTGCTCCTTGTAAACACAAGA
39794381 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
39794446 GATCTGCTC
66 GATCTGCTC
39794455 TCCGTCAAAT
Statistics
Matches: 65, Mismatches: 5, Indels: 6
0.86 0.07 0.08
Matches are distributed among these distances:
87 25 0.38
88 1 0.02
89 35 0.54
90 4 0.06
ACGTcount: A:0.27, C:0.25, G:0.17, T:0.30
Consensus pattern (89 bp):
ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
GATCTGCTCCTTGTAAACACAAGA
Found at i:39794499 original size:44 final size:43
Alignment explanation
Indices: 39794441--39794523 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
39794431 ATCTGCTATG
* * * *
39794441 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCCGCTCTCCGAC-AATACGGAGATGCCAAATCTGTT
*
39794485 TCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATC
39794524 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
43 18 0.53
44 16 0.47
ACGTcount: A:0.25, C:0.28, G:0.17, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATCTGTT
Found at i:39794609 original size:86 final size:88
Alignment explanation
Indices: 39794514--39794674 Score: 211
Period size: 88 Copynumber: 1.9 Consensus size: 88
39794504 CAATACGGAG
* *
39794514 ATGCCAAATCATCTTAGATCCGCTTC-A-GTGTAAACA-CCTGAAGATCAAATCTACTATGTCTT
1 ATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCC-AAAGATCAAATCTACTATGTCTT
* *
39794576 CGTTTTGCTCTTGTAAACACAGGA
65 CGATCTGCTCTTGTAAACACAGGA
* * * * *
39794600 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGTCTTC
1 ATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCCAAAGATCAAATCTACTATGTCTTC
39794665 GATCTGCTCT
66 GATCTGCTCT
39794675 CCATTGAATA
Statistics
Matches: 63, Mismatches: 9, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
86 24 0.38
87 1 0.02
88 36 0.57
89 2 0.03
ACGTcount: A:0.29, C:0.23, G:0.16, T:0.32
Consensus pattern (88 bp):
ATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCCAAAGATCAAATCTACTATGTCTTC
GATCTGCTCTTGTAAACACAGGA
Found at i:39795038 original size:133 final size:132
Alignment explanation
Indices: 39794791--39795150 Score: 435
Period size: 133 Copynumber: 2.7 Consensus size: 132
39794781 ATCTGCTATG
*
39794791 TCTTCGATTTGCTTCT-TGTA-AACACAGTA-ATGCCAAATCATT-TTGGATCTGCTTCGATGTG
1 TCTTCGATTTG-TTCTCTG-ACAATACAG-AGATGCCAAATC-TTCTTGGATCTGCTTC-ATGTG
* * * * * *
39794852 AAATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAA
61 AAAACATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAA
39794917 ATCTGTT
126 ATCTGTT
*
39794924 TCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAA
1 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTC-ATGTGAAAA
* * * * *
39794989 CATCCAAAGGTCAGATCTGCTACGTCTTCGAACTACTCTCCGTCGAATATGGAGATGCCAAATCT
65 CATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAAATCT
39795054 GTT
130 GTT
** * * *
39795057 TCTTCGATTTGTTCTCTGACAATACAGAGACACCAAATCATCTTGGATCTACTTCA-GTGTAAAC
1 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCATGTGAAAAC
* *
39795121 A-CCTGAAGGTCAAATCTACTATGTCTTCGA
66 ATCC-AAAGGTCAGATCTACTATGTCTTCGA
39795151 TTTGCTCTTT
Statistics
Matches: 199, Mismatches: 23, Indels: 12
0.85 0.10 0.05
Matches are distributed among these distances:
130 2 0.01
131 30 0.15
132 9 0.05
133 158 0.79
ACGTcount: A:0.28, C:0.22, G:0.16, T:0.34
Consensus pattern (132 bp):
TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCATGTGAAAAC
ATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAAATCTG
TT
Found at i:39795206 original size:220 final size:220
Alignment explanation
Indices: 39794953--39797351 Score: 3463
Period size: 220 Copynumber: 10.9 Consensus size: 220
39794943 CAATACAGAG
* * *
39794953 ATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39795018 GAACTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39795083 GAGACACCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39795148 CGATTTGCTCTTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39795173 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATTTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * *
39795238 GAACTTCTCTCCATTGAATATGGAGATTCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39795303 GAGATGGCAAATCATCTTGGATCTATTTCAGTGTAAACACTTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39795368 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39795393 ATGCCAAAGCATCTTAGATCTGCTTCGATGTGAGAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39795458 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTATTCGATTTGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * *
39795523 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTA
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT-
*
39795588 TC-ATTTTCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * *
39795613 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * **** *
39795678 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGAAAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39795743 GAGATGCCAAATCATCTTGGCTCTGCTTCAGTGTAAACACCTGAAGGTCCGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39795808 CGATTTGCTCCTGGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * ** * * *
39795833 ATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACCAAAGGTCAGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
** * * * *
39795898 GATCTGCTCTCCGTCGAATATAAAGCTGCCAAATCTATTTCTTTGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39795963 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39796028 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39796053 ATGCCAAATCATCTT-GAACTTGATTCGATGTGAAAACATCCAAAGCTCAGTTCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATC-TGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTT
* * * ****
39796117 CGATCTTCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATAC
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * * * * *
39796182 AGAGATGCCAAATCATCTTAGATCCACTTTAGAGCAAACACTTGAAGGTCAGATCTGCTATGTTT
130 AGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* * * *
39796247 TCGATCTACCCCCTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * *
39796273 ATGCCAAATCGTCTTGGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATATCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39796338 GATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATATGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39796403 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCGGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39796468 CAATTTACTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** *
39796493 ATGGTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAATGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39796558 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39796623 GAGATGTCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTTCAATGTCT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
*
39796687 TCGATTTTCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * * * * * * *
39796713 ATGCCAAATCATCTTGGACCTTCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** *
39796778 GATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** ** *
39796843 GAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39796908 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39796933 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATTTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39796998 GATCAGCTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39797063 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAAAACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39797128 CAATTTGCCCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39797153 ATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39797218 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTTTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** *
39797283 GAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAAAACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39797348 CGAT
196 CGAT
39797352 CTGTTCTCCG
Statistics
Matches: 1923, Mismatches: 250, Indels: 12
0.88 0.11 0.01
Matches are distributed among these distances:
219 5 0.00
220 1911 0.99
221 7 0.00
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39796412 original size:43 final size:44
Alignment explanation
Indices: 39796333--39796415 Score: 123
Period size: 43 Copynumber: 1.9 Consensus size: 44
39796323 ATCTGCTATA
* * *
39796333 TCTTCGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTT
1 TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATCTGTT
*
39796377 TCTTCGATATGTTCTCTGAC-AATATAGAGATGCCAAATC
1 TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATC
39796416 ATCTTGGATC
Statistics
Matches: 35, Mismatches: 4, Indels: 1
0.88 0.10 0.03
Matches are distributed among these distances:
43 18 0.51
44 17 0.49
ACGTcount: A:0.25, C:0.22, G:0.18, T:0.35
Consensus pattern (44 bp):
TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATCTGTT
Found at i:39797983 original size:220 final size:220
Alignment explanation
Indices: 39797286--39809456 Score: 12712
Period size: 220 Copynumber: 55.9 Consensus size: 220
39797276 CAATACAGAG
* *
39797286 ATGCCAAATCATCTTGGATCTGTTTC-A-GTGTAAAA-A-CCTGAAGGTCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCC-AAAGGTCAGATCTGCTATGTCT
* * * *
39797347 TCGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-T-TCT--C-AT-
64 TCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATA
* ** * *
39797406 ---ATATGTAAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTC
129 CAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC
* *
39797468 TTCGACTTGCTCCTTGTAAACACCAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
* *
39797495 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCATATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39797559 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39797624 GAGATGCCAAATCTTCTTGGATCTGCTTCAGTGTAAA-ACCTGAAGATCAGATCTGCTATGCCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39797688 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39797713 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAACACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39797778 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCCGTTTCTTTGATTTGTTCTGTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39797843 GAGATGCCAAGTCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39797908 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39797933 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39797998 GATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCTATTTGTTCACTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * *
39798063 GAGACACCAAATAATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39798128 TGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39798153 ATGCCAAATCATCTTGGACCTGCTTCGATGTGATAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39798218 GATCTGCTTTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTAACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39798283 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39798348 CAATTTACTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39798373 ATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39798438 GATCTGCTCTCCGTCGAATATGGAGATGCTAATTCTGTTTTTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39798503 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTCCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
*
39798567 TCGATTTGCTACTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39798593 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39798658 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39798723 GAGATGCCAAATAATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39798788 CAATTTTCTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39798813 ATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGACTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39798878 GATCTACTCTCCGTCGAATATGGAGATGCTAATTCTGTTT-TTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39798942 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTCCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
*
39799006 TCGATTTGCTACTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39799032 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39799097 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * * *
39799162 GAAATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTCCTAAAGGCCAGATCTACTAAGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39799227 CAATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39799252 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * ** * *
39799317 GATCTGCTCTCCGTCAAATATGGAGAAGCCAAATCTGTCTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39799382 GAGATGCCAAATCATCTTAGATCCGCTTCAATGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39799447 CGTTTTGCT-CTGTGTAAACACAAGA
196 CGATTTGCTCCT-TGTAAACACAAGA
** * *
39799472 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39799537 GATCTGCTTTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39799602 GAGATGCCAAATCATCTTGGATCTACTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39799667 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39799692 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39799757 GATCTACTCTCCGTCGAATATGGGGATAACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *** * ** *
39799822 GAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39799887 CGATTTGCTTCTTGTAAACAC-AGTA
196 CGATTTGCTCCTTGTAAACACAAG-A
* * * * *
39799912 ATGCCAAATCGTTTTGGATCTGATTCGACGTGAAATCATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39799977 GACCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39800042 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39800107 CGAGTTGCTCCATGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39800132 ATGCCAGATCATCTTAGATCTGCTTCGACGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39800197 GATCTACTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * * *
39800262 GAGACACCAAATCATCTTGGATTTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39800327 CGATTTGCTCCTTGTAACCATAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39800352 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** ** *
39800417 GATCTGCTCTCCGTC-AATTATGGAGTTGGCAAATCTGTTTCTTAAATCCGCTCTCT-ACAATAC
66 GATCTGCTCTCCGTCGAA-TATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * *
39800480 AGAGATGCCAAATCATCTTGGCTCTGCTTCAATGTAAACACCTGAAGGTCAGATCTGCTATGCCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
*
39800545 TCGATTTGCTACTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * * * *
39800571 ATGCCAAATCATCTTGTATCTGCTTTGTTGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39800636 GATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39800701 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39800766 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39800791 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGAT-TGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ****
39800855 GATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39800920 GAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39800985 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** *
39801010 ATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39801075 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTAGTTCTATGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39801140 GAGATGCCAAATCATCTTGGATGTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39801205 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39801230 ATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39801295 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39801359 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39801424 CGACTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39801449 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAGAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39801514 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39801579 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39801643 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39801669 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * *
39801734 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39801799 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGATCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39801864 CG-TTTGCTCTTTGTAAACACAGGA
196 CGATTTGCTCCTTGTAAACACAAGA
** * *
39801888 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATGTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39801953 GATCTGCTCTCCATTGAATATGAATATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * ** *
39802018 GAGAGGCCAAATCATCTCGGATC-GAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTG-CTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
*
39802082 TCGATTTGCTTCTTGTAAACAC-AGTA
195 TCGATTTGCTCCTTGTAAACACAAG-A
* * * * *
39802108 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39802173 GATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39802238 GAGATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCC-AAAGGTCAGATCTGCTACGT
131 GAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGT
** * * * * **
39802302 CTTCGAACTACT-CTCCGTCGAATA-TGGA
193 CTTCGATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * ** *
39802330 GATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTG-ACA-ATACAGAGACCA-A-AT-C-A--T
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * * * * *
39802384 CTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGTCAAATCTACTATGTCTTCGATTTGCTCT
62 CTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTTCT
* * *
39802445 -TGTA-AACACA-AGAATGCCAAATCAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGT
120 CTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGT
* **
39802504 CAGATCTGCTAT-TCTTCGAACTTCT-CTCCATTG--AATA-TGGA
179 CAGATCTGCTATGTCTTCG-A-TT-TGCTCC-TTGTAAACACAAGA
* * * * * *
39802545 GAT-CCAAATCTATTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGG-CA-A-AT-C-A
1 -ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACATCCA-AAGGTCAGATCTGCTA
* * * * * * * * *
39802599 --TCTTGGATCT-AT-TCAGT-GTAAACACTTGA-AGGTCAGATCTGCTATGTCTTCGATTTGCT
59 TGTCTTCGATCTGCTCTCCGTCG--AATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * * *
39802658 C-CTTGTA-AACACA-AGAATGCCAAAGCATCTTAGATCTGCTTC-GATGTGAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAG
* * * * * * **
39802718 GTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-TGGA
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * * * * **
39802762 GATGCCAAATCTGTTTATTCGATTTG-TTC--TCTGACAATAT--AGA-GACACCAAAT-C-A--
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTATG
* * * * * *
39802817 TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAAATCTACTATGTCTATC-A-TT-TT
61 TCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT-GT-T-TCT-TCGATTTGTT
* * *
39802875 CTCCTTGTA-AACACA-AGAATGCCAAATCAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AA
118 CT-C-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGA
* * * **
39802935 AGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGA
175 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* ** ** * * * * *
39802981 GATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTG-AAA-ATACAGAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTAT
* * * * * * * *
39803036 -TCTTGGCTCTGCT-TCAGT-GTAAACACCT-GA-AGGTC-GATCTGCTATGTCTTCGATTTGCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * * ** * * *
39803095 C-CTGGTA-AACACA-AGAATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAG
118 CTCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAG
* * * * *
39803156 GTCAGATCTACTATGTCTTCCATCTGCT-CTCCGTCGAATATA-AAG-
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT--AA-ACACAAGA
* * * * * * * * *
39803201 CTGCCAAATCTATTTCTTTGATTTG-TTC--TTTGACAATACA--GAGATGCCA-A-AT-C-A--
1 ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
* * * * * * *
39803255 TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGCCAGATCTGCTATGTCTTCGATTTGCTC
61 TCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
* * * * *
39803316 -CTTGTA-AACACA-AGAATGCCAAATCATCTT-GAACTTGATTCGATGTGAAAACATCC-AAAG
119 TC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATC-TGCTTC-A-GTGTAAACA-CCTGAAG
* * * * **
39803376 CTCAGTTCTGCTATGTCTTCGATCTT-CT-CTCCGTCAAATA-TGGA
177 GTCAGATCTGCTATGTCTTCGAT-TTGCTCCT-TGT-AAACACAAGA
* ** ** * * * * * *
39803420 GATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* ** ** * * * * * * * * ** *
39803475 -TCTTAGATCCACT-TTAGAGCAAACACT-GA-AGGTCAGATCTGCTATGTTTTCGATCT-ACCC
60 GTCTTCGATCTGCTCTCCG-TCGAATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* * *
39803535 CTGTA-AACACA-AGAATGCCAAATCGTCTTGGATCTGCTTC-GATGTAAAACATCC-AAAGGTC
120 CTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGGTC
* * * * **
39803596 AGATCTGCTATATCTTCGATCTGTTCTCC--GTCGAATA-TGGA
180 AGATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA
* * * * * * ** * * * *
39803637 GATGCCAAATCTGTTTCTTCGATATG-TTC--TCTGACAATATAGAGATGCCA-A-AT-C-A--T
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGT
* * * * * * * * **
39803693 CTTGGATCTACT-TCAGT-GTAAACACCT-GA-AGGTC-GATCTGCTATGTCTTCAATTTACTC-
62 CTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* ** * * *
39803752 CTCGTA-AACACA-AGAATGGTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAATGT
120 CT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGT
* * * * **
39803814 CAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGA
179 CAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * *
39803856 GATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGTCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * *
39803911 -TCTTGGATCTGCT-TCAGT-GTAAACACCTGAAG-T-CCAGATCT-TCAATGTCTTCGATTTCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTGT---T-TCTTCGATTTGT
* * * * *
39803970 CCT-TGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC-GATGTGAAACATCCAG-AG
117 TCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAG
* * * * * * * * **
39804030 GTCAGATCTTCAATGTATTAGATCTACT-CTCCGTCAAATA-TGGA
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* ** * * * * * * *
39804074 GATGCCAAATCTGTTTCTTCAATCCGC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * *
39804129 -TCTT-AATCCGCT-TCAGT-GTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * * *
39804188 C-CTTGTA-AACACA-AGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
** **
39804249 GTCAGAT-TGCTATGTCTTCGATCAGCTCTCCATTG-AATA-TGAAG-
177 GTCAGATCTGCTATGTCTTCGATTTG--CTCC-TTGTAA-ACACAAGA
* * * * * * * * *
39804293 ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--
1 ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
* * * * * * * * **
39804347 TCTTGGATCTACT-TCAGT-GTAAAACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTGCCCT
61 TCTTCGATCTGCTCTCCGTCG-AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* * * *
39804408 -TGTA-AACACA-AGAATGCCAAATCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AAAGGT
120 CTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGAAGGT
* * * * * **
39804468 TAGATCTGCTATG-CTTCGATCTGCT-CTCCGTCGAATA-TGGA
179 CAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA
* * ** * * * * * *
39804509 GATGCCAAATCTGTTTCTTCGAT-TTTTTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * *
39804564 -TCTTGGATCTG-T-TCAGT-GTAAAACCT-GA-AGGTCAGATCTGCTATGTCTTCGATCTGTTC
60 GTCTTCGATCTGCTCTCCGTCG-AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
* * ** * ** * * * *
39804623 TCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTGTTCTCATATATGTAAATCATCTTA
119 TCTGAC-AATACAGAGATGCCAAATC-A--TCTTGGATCTGCT-TC--A-GTGTAAA-CA-CCT-
* * * ** * * * *
39804688 GATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCGACTTGCTCCTTGTAAAC
173 GA--AG-GTCA--G--ATCTGCT--ATGTC--TTC-GATTTG-C-TC--CTT-------GTAAAC
*
39804753 ACCAGA
215 ACAAGA
39804759 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39804821 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39804886 GAGATGCCAAATC-TCTTGGATCTGCTTCAGTGTAAA-ACCTGAA-GTCAGATCTGCTATG-CTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39804947 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39804971 A-GCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805034 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATC-GTTTCTTTGATTTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805097 GAGATGCC-AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805161 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805185 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805248 GATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39805310 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805375 -GATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805399 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805462 GATCTGCT-TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805526 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805591 C-ATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805614 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805679 GATCTGCTCTCCGTCGAATATGGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805742 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805806 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805830 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT-TT-
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805890 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805954 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39806019 CAATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39806043 AT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806107 GATCTACTCTCCGTCGAATATGGAGATGCC-AATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39806171 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806235 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39806260 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806324 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39806388 GA-ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806452 C-ATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39806476 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39806541 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39806605 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806669 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
**
39806693 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806758 GATCTGCT-TCCAT-GAATAT-GAGATGCCAAATCTGTTTCTT-GATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39806819 GAGATGCCAAATCATCTTGGATCTACTT-AGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39806883 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39806908 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806971 GATCTACTCTCCGTCGAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807034 GAGATG-CAAATCATCTTGGATC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807093 CGATTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807116 ATGCCAAATC-T-TTGGATCTG-TTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807177 GA-CTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807241 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807305 CGA-TTGCTCC-TGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807328 ATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39807389 GATCTACTCTCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTC-CTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807452 GAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTAT-TCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807513 CGATTTGCTCCTTGT-AAC-CAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807536 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807601 GATCTGCTCTCCGTC-AATATGGAG-TG-CAAATCTGTTTCTT--AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807661 GAGATGCCAAATCATCTTGGCTCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATG-CTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807724 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39807748 ATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807810 GATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807874 GAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807938 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39807963 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGT-AGAT-TGCTATGTCTT-
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ***
39808025 GATCTGCTCTCCGTCAAATATGGAGATG-CAAATCTGTTTCTTC-AATCCCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39808088 GAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39808153 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39808178 ATG-CAAATCATCTTGGATCTGC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808241 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39808304 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39808369 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39808394 ATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808459 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39808523 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39808588 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39808613 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808676 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39808741 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39808805 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
39808831 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39808894 GATCTGCTCT-CGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATTCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39808958 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAA-GTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39809022 CGTTTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
**
39809045 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39809109 GATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39809172 GAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATGTTTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39809234 CGATTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39809257 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39809321 GATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39809386 GAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTACGT
131 GAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGT
39809450 CTTCGAT
193 CTTCGAT
39809457 CTACTCTCCG
Statistics
Matches: 10634, Mismatches: 955, Indels: 736
0.86 0.08 0.06
Matches are distributed among these distances:
205 43 0.00
206 30 0.00
207 40 0.00
208 79 0.01
209 106 0.01
210 229 0.02
211 255 0.02
212 441 0.04
213 381 0.04
214 535 0.05
215 563 0.05
216 726 0.07
217 991 0.09
218 948 0.09
219 1823 0.17
220 3138 0.30
221 48 0.00
222 49 0.00
223 23 0.00
224 7 0.00
225 5 0.00
226 9 0.00
227 1 0.00
228 3 0.00
229 2 0.00
230 4 0.00
231 1 0.00
232 1 0.00
233 4 0.00
234 3 0.00
235 2 0.00
236 1 0.00
238 4 0.00
239 6 0.00
240 2 0.00
241 1 0.00
242 6 0.00
243 1 0.00
244 2 0.00
245 9 0.00
246 15 0.00
247 2 0.00
248 16 0.00
249 8 0.00
250 22 0.00
251 17 0.00
252 11 0.00
253 4 0.00
254 16 0.00
255 1 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39797996 original size:89 final size:87
Alignment explanation
Indices: 39797846--39798006 Score: 234
Period size: 89 Copynumber: 1.8 Consensus size: 87
39797836 CAATACAGAG
* * * *
39797846 ATGCCAAGTCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTACGTCTTCGA
*
39797911 TTTACTCCTTGTAAACACAAGA
66 TCTACTCCTTGTAAACACAAGA
*
39797933 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTACGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGAAAACA-CCTAAAGGTCAGATCTGCTACGTCTT
39797997 CGATCTACTC
63 CGATCTACTC
39798007 TCCGTCAAAT
Statistics
Matches: 65, Mismatches: 6, Indels: 4
0.87 0.08 0.05
Matches are distributed among these distances:
87 24 0.37
88 1 0.02
89 38 0.58
90 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (87 bp):
ATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTACGTCTTCGA
TCTACTCCTTGTAAACACAAGA
Found at i:39799294 original size:439 final size:440
Alignment explanation
Indices: 39797286--39809456 Score: 12812
Period size: 439 Copynumber: 28.0 Consensus size: 440
39797276 CAATACAGAG
* *
39797286 ATGCCAAATCATCTTGGATCTGTTTC-A-GTGTAAAA-A-CCTGAAGGTCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCC-AAAGGTCAGATCTGCTATGTCT
* * * * *
39797347 TCGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-T-TCT--C-AT-
64 TCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATA
* ** * *
39797406 ---ATATGTAAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTC
129 CAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC
* *
39797468 TTCGACTTGCTCCTTGTAAACACCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACA
194 TTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACA
* * *
39797532 TCCAAAGGTCATATCTACTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGT
259 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGT
*
39797597 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAGTGTAAA-
324 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
* * *
39797661 ACCTGAAGATCAGATCTGCTATGCCTTCGATTTACTCCTTGTAAACACAAGA
389 ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * *
39797713 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAACACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39797778 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCCGTTTCTTTGATTTGTTCTGTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39797843 GAGATGCCAAGTCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39797908 CGATTTACTCCTTGTAAACACAAGAATGCCAAATCATTTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39797973 CAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * ** * *
39798038 CTTCTATTTGTTCACTGACAATACAGAGACACCAAATAATCTTGGATCTACTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* *
39798103 CTGAAGGCCAGATCTGCTATGTCTTTGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39798153 ATGCCAAATCATCTTGGACCTGCTTCGATGTGATAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39798218 GATCTGCTTTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTAACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39798283 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * *
39798348 CAATTTACTCCTCGTAAACACAAGAATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39798413 CAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATATGGAGATGCTAATTCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *
39798478 TTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39798543 CTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACACAAGA
391 CTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39798593 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39798658 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39798723 GAGATGCCAAATAATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * *
39798788 CAATTTTCTCCTCGTAAACACAAGAATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39798853 CAAAGGTCAGATCTGCTATGACTTCGATCTACTCTCCGTCGAATATGGAGATGCTAATTCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39798918 -TTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39798982 CTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTACTTGTAAACACAAGA
391 CTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39799032 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACCATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39799097 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * * *
39799162 GAAATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACTCCTAAAGGCCAGATCTACTAAGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39799227 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39799292 CAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGAAGCCAAATCTGTCT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* ** * * * * *
39799357 CTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGATCCGCTTCAATGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* *
39799422 CTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCT-CTGTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTAAACACAAGA
** * *
39799472 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * *
39799537 GATCTGCTTTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39799602 GAGATGCCAAATCATCTTGGATCTACTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39799667 CAATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * ** *
39799732 CAAAGGTTAGATCTGGTATGTCTTCGATCTACTCTCCGTCGAATATGGGGATAACAAATCTGGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *** * *
39799797 CTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39799862 ATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAG-A
* * * * *
39799912 ATGCCAAATCGTTTTGGATCTGATTCGACGTGAAATCATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39799977 GACCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39800042 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * *
39800107 CGAGTTGCTCCATGTAAACACAAGAATGCCAGATCATCTTAGATCTGCTTCGACGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39800172 CAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* ** *
39800237 CTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATTTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * * * *
39800302 CTGAAGGTCAAATCTACTATTTCTTCGATTTGCTCCTTGTAACCATAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39800352 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** ** *
39800417 GATCTGCTCTCCGTCAATTATGGAGTTGGCAAATCTGTTTCTTAAATCCGCTCTCT-ACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39800481 GAGATGCCAAATCATCTTGGCTCTGCTTCAATGTAAACACCTGAAGGTCAGATCTGCTATGCCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * *
39800546 CGATTTGCTACTTGTAAACACAAGAATGCCAAATCATCTTGTATCTGCTTTGTTGTGAAAACAAC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39800611 CAAAGGTCAGACCTGCTATGTCTTCGATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39800676 CTTTGATTTGTTCTCTGACAATACAGAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39800741 CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39800791 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGAT-TGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ****
39800855 GATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGTTTCTTCAATCCCCTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39800920 GAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
** *
39800985 CGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39801050 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * *
39801115 CTTCGATTAGTTCTATGACAATACAGAGATGCCAAATCATCTTGGATGTACTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39801180 CTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * *
39801230 ATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39801295 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39801359 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39801424 CGACTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39801489 CAGAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39801554 CTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39801619 CTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39801669 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* ** * *
39801734 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39801799 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGATCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * **
39801864 CG-TTTGCTCTTTGTAAACACAGGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * *
39801928 CAAAGGTCAGATGTACTATGTCTTCGATCTGCTCTCCATTGAATATGAATATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * * *
39801993 CTTTGATTTGTTCTCTGACAATACAGAGAGGCCAAATCATCTCGGATC-GAATTCAGAGTAAACA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTG-CTTCAGTGTAAACA
** * *
39802057 AATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAG-A
* * * * *
39802108 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39802173 GATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39802238 GAGATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCC-AAAGGTCAGATCTGCTACGT
131 GAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGT
** * * * * ** * * * *
39802302 CTTCGAACTACT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCGATTTG-TTC--TCT
193 CTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGGATCTGCTTCGATGT
* * * ** * * * * * *
39802362 G-ACA-ATACAGAGACCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GTAAACACCT-GA-AG
252 GAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGAT
* * * *
39802415 GTCAAATCTACTATGTCTTCGATTTGCTCT-TGTA-AACACA-AGAATGCCAAATCAT-TTGGAT
313 GCCAAATCT-GT-T-TCTTCGATTTGTTCTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGAT
* *
39802476 CTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTAT-TCTTCGAACTTCT-CTCCATTG
373 CTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTCG-A-TT-TGCTCC-TTG
* **
39802537 --AATA-TGGA
430 TAAACACAAGA
* * * * * *
39802545 GAT-CCAAATCTATTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGG-CA-A-AT-C-A
1 -ATGCCAAATC-A--TCTTGGATCTGCTTCGATGTGA-AA-ACATCCA-AAGGTCAGATCTGCTA
* * * * * * * * * *
39802599 --TCTTGGATCT-AT-TCAGTGTAAACACTTGA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC
59 TGTCTTCGATCTGCTCTCCGT-CAAATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
* * * *
39802659 -CTTGTA-AACACA-AGAATGCCAAAGCATCTTAGATCTGCTTC-GATGTGAAACATCC-AAAGG
119 TC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGG
* * * * * * ** * * *
39802719 TCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTATTC
178 TCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTG
* * * * * * * ** * *
39802782 GATTTG-TTC--TCTGACAATAT--AGA-GACACCAAAT-C-A--TCTTGGATCTGCT-TCAGT-
237 GATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGTC
* * * * *
39802835 GTAAACACCT-GA-AGGTCAAATCTACTATGTCTATC-A-TT-TTCTCCTTGTA-AACACA-AGA
301 G--AATA--TGGAGATGCCAAATCT-GT-T-TCT-TCGATTTGTTCT-C-TG-ACAATACAGAG-
* *
39802893 ATGCCAAATCAT-TTGGATCTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTGCTATGTCT
354 ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCT
* * * **
39802955 TCGATCTGCT-CTCCGTCAAATA-TGGA
415 TCGATTTGCTCCT-TGT-AAACACAAGA
* ** ** * * * * *
39802981 GATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTG-AAA-ATACAGAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTAT
* * * * * * * * *
39803036 -TCTTGGCTCTGCT-TCAGTGTAAACACCT-GA-AGGTC-GATCTGCTATGTCTTCGATTTGCTC
60 GTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
* * * ** * * *
39803096 -CTGGTA-AACACA-AGAATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACC-AAAGG
119 TCT-G-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGC-TTCA-GTGTAAAC-ACCTGAAGG
* * * * * *
39803157 TCAGATCTACTATGTCTTCCATCTGCT-CTCCGTCGAATATA-AAG-CTGCCAAATCTATTTCTT
178 TCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT--AA-ACACAAGAATGCCAAATC-A--TCTT
* * * * * * * * * * *
39803219 TGATTTG-TTC--TTTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAG
236 GGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG
* * * * *
39803272 T-GTAAACACCT-GA-AGGCCAGATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGA
299 TCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-
* * * * * *
39803331 ATGCCAAATCATCTT-GAACTTGATTCGATGTGAAAACATCC-AAAGCTCAGTTCTGCTATGTCT
354 ATGCCAAATCATCTTGGATC-TGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCT
* * **
39803394 TCGATCTT-CT-CTCCGTCAAATA-TGGA
415 TCGAT-TTGCTCCT-TGT-AAACACAAGA
* ** ** * * * * * *
39803420 GATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* ** ** * * * * * * * ** *
39803475 -TCTTAGATCCACT-TTAGAGCAAACACT-GA-AGGTCAGATCTGCTATGTTTTCGATCT-ACCC
60 GTCTTCGATCTGCTCTCCG-TCAAATA-TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* * *
39803535 CTGTA-AACACA-AGAATGCCAAATCGTCTTGGATCTGCTTC-GATGTAAAACATCC-AAAGGTC
120 CTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGGTC
* * * * ** * *
39803596 AGATCTGCTATATCTTCGATCTGTTCTCC--GTCGAATA-TGGAGATGCCAAATCTGTTTCTTCG
180 AGATCTGCTATGTCTTCGAT-T-TGCTCCTTGT-AAACACAAGA-ATGCCAAATC---ATCTTGG
* * * * ** * * * * * * *
39803658 ATATG-TTC--TCTGACAATATAGAGATGCCA-A-AT-C-A--TCTTGGATCTACT-TCAGT-GT
238 ATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-
* * * * * ** * *
39803712 AAACACCT-GA-AGGTC-GATCTGCTATGTCTTCAATTTACTC-CTCGTA-AACACA-AGAATGG
302 -AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGAG-ATGC
* * * *
39803771 TAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAATGTCAGATCTGCTATGTCTTCGAT
358 CAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGAT
* * * * **
39803835 CTGCT-CTCCGTCGAATA-TGGA
420 TTGCTCCT-TGT-AAACACAAGA
* * * * * * * *
39803856 GATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGTCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * * *
39803911 -TCTTGGATCTGCT-TCAGTGTAAACACCTGAAG-T-CCAGATCT-TCAATGTCTTCGATTTCTC
60 GTCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTGT---T-TCTTCGATTTGTT
* * * *
39803971 CT-TGTA-AACACA-AGAATGCCAAATCATCTTGGACCTTCTTC-GATGTGAAACATCCAG-AGG
118 CTCTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACA-CCTGAAGG
* * * * * * * * ** * *
39804031 TCAGATCTTCAATGTATTAGATCTACT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTTC
178 TCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTG
* * * * * * * * * * *
39804094 AATCCGC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTT-AATCCGCT-TCAGT
237 GATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT
* * * * *
39804146 -GTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAA
300 CG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-A
* * *
39804205 TGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGAT-TGCTATGTCTTC
355 TGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTC
** **
39804268 GATCAGCTCTCCATTG-AATA-TGAAG-
417 GATTTG--CTCC-TTGTAA-ACACAAGA
* * * * * * * * *
39804293 ATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--
1 ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
* * * * * * * * **
39804347 TCTTGGATCTACT-TCAGTGTAAA-ACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTGCCCT
61 TCTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCT
* * * *
39804408 -TGTA-AACACA-AGAATGCCAAATCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AAAGGT
120 CTG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGAAGGT
* * * * * ** * *
39804468 TAGATCTGCTATG-CTTCGATCTGCT-CTCCGTCGAATA-TGGAGATGCCAAATCTGTTTCTTCG
179 CAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTTGG
** * * * * * * * *
39804530 AT-TTTTTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTG-T-TCAGT-
238 ATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
* * * * * * * **
39804581 GTAAAACCT-GA-AGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCGTCGAATATGGAGATGCC
301 G-AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTGAC-AATACAGAGATGCC
39804644 AAATCTATTTATTCAATTTGTTCTCATATATGTAAATCATCTTAGATCTGCTTCAGTGTAAACAC
359 --A---A---A-TC-A-------TC---T-TG------------GATCTGCTTCAGTGTAAACAC
* * *
39804709 CTAAAGGTCAGATCTGCTATGTCTTCGACTTGCTCCTTGTAAACACCAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39804759 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39804821 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39804886 GAGATGCCAAATC-TCTTGGATCTGCTTCAGTGTAAA-ACCTGAA-GTCAGATCTGCTATG-CTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39804947 CGATTT-CTCCTTGTAAACACAAGAA-GCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39805009 CAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCGAATATGGAGATGCCAAATC-GTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39805073 CTTTGATTTGTTCT-TGACAATACAGAGATGCC-AATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39805136 CTGAAGGTCAGATCTGCTATGTCTTCGATTT-CTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39805185 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805248 GATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39805310 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805375 -GATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39805437 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
39805501 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39805566 CTGAAGGTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39805614 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805679 GATCTGCTCTCCGTCGAATATGGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805742 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805806 CGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39805868 C-AAGGTCAGATCTGCTATGT-TT-GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39805929 CTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39805994 CTGAAGGTCAGATCTGCTATGTCTTCAATTT-CTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
*
39806043 AT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39806107 GATCTACTCTCCGTCGAATATGGAGATGCC-AATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39806171 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806235 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39806300 C-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39806363 CTTTGATTTGTTCTCTGACAATACAGA-ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39806427 CTGAAGGTCAGATCTACTATGTCTTC-ATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39806476 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39806541 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39806605 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
**
39806669 CGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39806733 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCAT-GAATAT-GAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39806795 CTT-GATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTT-AGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* *
39806858 CTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
*
39806908 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39806971 GATCTACTCTCCGTCGAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807034 GAGATG-CAAATCATCTTGGATC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807093 CGATTTGCT-CTTGTAAACAC-AGAATGCCAAATC-T-TTGGATCTG-TTCGATGTG-AAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39807152 CAAAGGTCAGATCTGCTATGTCTTCGA-CTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39807216 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39807281 CT-AAGGTCAGATCTGCTATGTCTTCGA-TTGCTCC-TGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39807328 ATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39807389 GATCTACTCTCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTC-CTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807452 GAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTAT-TCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807513 CGATTTGCTCCTTGT-AAC-CAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39807576 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAG-TG-CAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * *
39807638 CTT--AATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGCTCTGCTTCA-TGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39807700 CTGAAGGTCAGATCTGCTATG-CTTCGATTTGCT-CTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39807748 ATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39807810 GATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807874 GAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39807938 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39808003 CAAAGGT-AGAT-TGCTATGTCTT-GATCTGCTCTCCGTCAAATATGGAGATG-CAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *** * *
39808064 CTTC-AATCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39808128 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39808178 ATG-CAAATCATCTTGGATCTGC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39808241 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39808304 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * * *
39808369 CAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39808434 CAAAGGTCAGATCTGCTATGTCTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *
39808498 CTTCGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39808563 CTGAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39808613 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39808676 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39808741 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39808805 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39808869 CCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT-CGTCAAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* * * * *
39808932 TCTTCAATTCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* *
39808997 CCTGAA-GTCAAATCTGCTATGTCTTCGTTTTGCT-CTTGTAAACAC-AGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
**
39809045 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* ** *
39809109 GATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39809172 GAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATGTTTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39809234 CGATTTGCT-CTTGTAAACAC-AGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * *
39809296 CAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39809361 CTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAAC
* *
39809426 ATCC-AAAGGTCAGATCTGCTACGTCTTCGAT
389 A-CCTGAAGGTCAGATCTGCTATGTCTTCGAT
39809457 CTACTCTCCG
Statistics
Matches: 10511, Mismatches: 873, Indels: 716
0.87 0.07 0.06
Matches are distributed among these distances:
417 6 0.00
418 94 0.01
419 101 0.01
420 173 0.02
421 112 0.01
422 152 0.01
423 73 0.01
424 133 0.01
425 111 0.01
426 143 0.01
427 274 0.03
428 473 0.05
429 357 0.03
430 283 0.03
431 426 0.04
432 361 0.03
433 308 0.03
434 430 0.04
435 575 0.05
436 435 0.04
437 596 0.06
438 414 0.04
439 2163 0.21
440 1892 0.18
441 52 0.00
442 14 0.00
443 20 0.00
444 2 0.00
445 4 0.00
446 8 0.00
450 1 0.00
451 2 0.00
452 3 0.00
455 2 0.00
456 1 0.00
457 10 0.00
458 6 0.00
459 5 0.00
460 12 0.00
461 17 0.00
462 18 0.00
463 46 0.00
464 10 0.00
465 43 0.00
466 28 0.00
467 58 0.01
468 31 0.00
469 19 0.00
470 14 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (440 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
Found at i:39799370 original size:44 final size:43
Alignment explanation
Indices: 39799312--39799394 Score: 103
Period size: 43 Copynumber: 1.9 Consensus size: 43
39799302 ATCTGCTATG
* * * *
39799312 TCTTCGATCTGCTCTCCGTCAAATATGGAGAAGCCAAATCTGTC
1 TCTTCAATCCGCTCTCCGAC-AATACGGAGAAGCCAAATCTGTC
* *
39799356 TCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACGGAGAAGCCAAATC
39799395 ATCTTAGATC
Statistics
Matches: 33, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
43 17 0.52
44 16 0.48
ACGTcount: A:0.27, C:0.29, G:0.17, T:0.28
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACGGAGAAGCCAAATCTGTC
Found at i:39799702 original size:87 final size:89
Alignment explanation
Indices: 39799605--39799765 Score: 211
Period size: 89 Copynumber: 1.8 Consensus size: 89
39799595 CAATACAGAG
* * * *
39799605 ATGCCAAATCATCTTGGATCTACTT-TA-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGAATCTACTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
*
39799667 CAATTTACTCCTTGTAAACACAAGA
65 CAATCTACTCCTTGTAAACACAAGA
* * *
39799692 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGAATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39799757 GATCTACTC
66 AATCTACTC
39799766 TCCGTCGAAT
Statistics
Matches: 62, Mismatches: 9, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
87 23 0.37
88 1 0.02
89 36 0.58
90 2 0.03
ACGTcount: A:0.30, C:0.22, G:0.16, T:0.32
Consensus pattern (89 bp):
ATGCCAAATCATCTTGAATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
AATCTACTCCTTGTAAACACAAGA
Found at i:39800805 original size:87 final size:88
Alignment explanation
Indices: 39800704--39800863 Score: 209
Period size: 87 Copynumber: 1.8 Consensus size: 88
39800694 CAATACAGAG
* * * *
39800704 ATGCCATATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGCCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCC-AAAGGCCAGAT-TGCTATGTCTT
*
39800766 CGATTTGCTCCTTGTAAACACAAGA
64 CGATCTGCTCCTTGTAAACACAAGA
* **
39800791 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATTGCTATGTCTTCG
1 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGCCAGATTGCTATGTCTTCG
39800856 ATCTGCTC
66 ATCTGCTC
39800864 TCCGTCAAAT
Statistics
Matches: 62, Mismatches: 8, Indels: 5
0.83 0.11 0.07
Matches are distributed among these distances:
87 23 0.37
88 21 0.34
89 16 0.26
90 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (88 bp):
ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGCCAGATTGCTATGTCTTCG
ATCTGCTCCTTGTAAACACAAGA
Found at i:39801681 original size:87 final size:89
Alignment explanation
Indices: 39801582--39801742 Score: 231
Period size: 89 Copynumber: 1.8 Consensus size: 89
39801572 CAATACAGAG
* * * *
39801582 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGT-CAAATCTGCTATGTCT
*
39801643 TCGATTTGCTCCTTGTAAACACAAGA
64 TCGATCTGCTCCTTGTAAACACAAGA
39801669 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
39801734 GATCTGCTC
66 GATCTGCTC
39801743 TCCGTCAAAT
Statistics
Matches: 65, Mismatches: 5, Indels: 6
0.86 0.07 0.08
Matches are distributed among these distances:
87 25 0.38
88 1 0.02
89 35 0.54
90 4 0.06
ACGTcount: A:0.27, C:0.25, G:0.17, T:0.30
Consensus pattern (89 bp):
ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
GATCTGCTCCTTGTAAACACAAGA
Found at i:39801787 original size:44 final size:43
Alignment explanation
Indices: 39801729--39801811 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
39801719 ATCTGCTATG
* * * *
39801729 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCCGCTCTCCGAC-AATACGGAGATGCCAAATCTGTT
*
39801773 TCTTCAATCCGCTCTCTGACAATACGGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATC
39801812 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
43 18 0.53
44 16 0.47
ACGTcount: A:0.25, C:0.28, G:0.17, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATCTGTT
Found at i:39802326 original size:133 final size:132
Alignment explanation
Indices: 39802079--39802436 Score: 435
Period size: 133 Copynumber: 2.7 Consensus size: 132
39802069 ATCTGCTATG
*
39802079 TCTTCGATTTGCTTCT-TGTA-AACACAGTA-ATGCCAAATCATT-TTGGATCTGCTTCGATGTG
1 TCTTCGATTTG-TTCTCTG-ACAATACAG-AGATGCCAAATC-TTCTTGGATCTGCTTC-ATGTG
* * * * * *
39802140 AAATCGTCCAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAA
61 AAAACATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAA
39802205 ATCTGTT
126 ATCTGTT
*
39802212 TCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAA
1 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTC-ATGTGAAAA
* * * * *
39802277 CATCCAAAGGTCAGATCTGCTACGTCTTCGAACTACTCTCCGTCGAATATGGAGATGCCAAATCT
65 CATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAAATCT
39802342 GTT
130 GTT
* * *
39802345 TCTTCGATTTGTTCTCTGACAATACAGAGA--CCAAATCATCTTGGATCTACTTCA-GTGTAAAC
1 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCATGTGAAAAC
* *
39802407 A-CCTGAAGGTCAAATCTACTATGTCTTCGA
66 ATCC-AAAGGTCAGATCTACTATGTCTTCGA
39802437 TTTGCTCTTG
Statistics
Matches: 199, Mismatches: 21, Indels: 14
0.85 0.09 0.06
Matches are distributed among these distances:
128 2 0.01
129 30 0.15
130 1 0.01
131 21 0.11
132 8 0.04
133 137 0.69
ACGTcount: A:0.28, C:0.22, G:0.16, T:0.34
Consensus pattern (132 bp):
TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCATGTGAAAAC
ATCCAAAGGTCAGATCTACTATGTCTTCGAACTACTCTCCATCAAATATAGAGATGCCAAATCTG
TT
Found at i:39802890 original size:219 final size:220
Alignment explanation
Indices: 39802241--39804616 Score: 3454
Period size: 219 Copynumber: 10.9 Consensus size: 220
39802231 CAATACAGAG
* * *
39802241 ATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39802306 GAACTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39802371 GAGA--CCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39802434 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39802458 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTAT-TCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39802521 GAACTTCTCTCCATTGAATATGGAGAT-CCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39802585 GAGATGGCAAATCATCTTGGATCTA-TTCAGTGTAAACACTTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39802649 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39802674 ATGCCAAAGCATCTTAGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39802738 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTATTCGATTTGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * *
39802803 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTA
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT-
*
39802868 TC-ATTTTCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39802893 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * **** *
39802957 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGAAAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39803022 GAGATGCCAAATCATCTTGGCTCTGCTTCAGTGTAAACACCTGAAGGTC-GATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39803086 CGATTTGCTCCTGGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * ** * * *
39803111 ATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACCAAAGGTCAGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* ** * * * *
39803176 CATCTGCTCTCCGTCGAATATAAAGCTGCCAAATCTATTTCTTTGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39803241 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39803306 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39803331 ATGCCAAATCATCTT-GAACTTGATTCGATGTGAAAACATCCAAAGCTCAGTTCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATC-TGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTT
* * * ****
39803395 CGATCTTCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATAC
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * * * *
39803460 AGAGATGCCAAATCATCTTAGATCCACTTTAGAGCAAACA-CTGAAGGTCAGATCTGCTATGTTT
130 AGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* * *
39803524 TCGATCTAC-CCCTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39803549 ATGCCAAATCGTCTTGGATCTGCTTCGATGT-AAAACATCCAAAGGTCAGATCTGCTATATCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39803613 GATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATATGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39803678 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTC-GATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39803742 CAATTTACTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** *
39803767 ATGGTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAATGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39803832 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39803897 GAGATGTCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTTCAATGTCT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39803961 TCGATTT-CTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39803986 ATGCCAAATCATCTTGGACCTTCTTCGATGTG-AAACATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** *
39804050 GATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* ** *
39804115 GAGATGCCAAATCATCTT-AATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39804179 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39804204 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT-TGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39804268 GATCAGCTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39804333 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39804397 CAATTTGC-CCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39804421 ATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATG-CTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39804485 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTTTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39804550 GAGATGCCAAATCATCTTGGATCT-GTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39804613 CGAT
196 CGAT
39804617 CTGTTCTCCG
Statistics
Matches: 1920, Mismatches: 215, Indels: 49
0.88 0.10 0.02
Matches are distributed among these distances:
214 40 0.02
215 74 0.04
216 150 0.08
217 393 0.20
218 480 0.25
219 587 0.31
220 196 0.10
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39803117 original size:437 final size:440
Alignment explanation
Indices: 39802241--39804616 Score: 3454
Period size: 437 Copynumber: 5.5 Consensus size: 440
39802231 CAATACAGAG
* * *
39802241 ATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39802306 GAACTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39802371 GAGA--CCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
* *
39802434 CGATTTGCT-CTTGTAAACACAAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * *
39802497 CAAAGGTCAGATCTGCTAT-TCTTCGAACTTCTCTCCATTGAATATGGAGAT-CCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39802560 CTTCGATTTGTTCTCTGACAATACAGAGATGGCAAATCATCTTGGATCTA-TTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
*
39802624 TTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * *
39802674 ATGCCAAAGCATCTTAGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39802738 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTATTCGATTTGTTCTCTGACAATATA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39802803 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTA
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCT-
* * *
39802868 TC-ATTTTCTCCTTGTAAACACAAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39802931 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* **** * * *
39802996 TCTTCAATCCACTCTCTGAAAATACAGAGATGCCAAATCATCTTGGCTCTGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACA
*
39803061 CCTGAAGGTC-GATCTGCTATGTCTTCGATTTGCTCCTGGTAAACACAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * ** * * *
39803111 ATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACCAAAGGTCAGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * * * *
39803176 CATCTGCTCTCCGTCGAATATAAAGCTGCCAAATCTATTTCTTTGATTTGTTCTTTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39803241 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
* *
39803306 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT-GAACTTGATTCGATGTGAAAACAT
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATC-TGCTTCGATGTGAAAACAT
* * * *
39803370 CCAAAGCTCAGTTCTGCTATGTCTTCGATCTTCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* **** * * * * *
39803435 TCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCACTTTAGAGCAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACA
* * * *
39803500 -CTGAAGGTCAGATCTGCTATGTTTTCGATCTAC-CCCTGTAAACACAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39803549 ATGCCAAATCGTCTTGGATCTGCTTCGATGT-AAAACATCCAAAGGTCAGATCTGCTATATCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
** * *
39803613 GATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATATGTTCTCTGACAATATA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39803678 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTC-GATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
* * * **
39803742 CAATTTACTCCTCGTAAACACAAGAATGGTAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39803807 CAAATGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39803872 CTTTGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
* *
39803937 CTGAA-GTCCAGATCTTCAATGTCTTCGATTT-CTCCTTGTAAACACAAGA
391 CTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * * * *
39803986 ATGCCAAATCATCTTGGACCTTCTTCGATGTG-AAACATCCAGAGGTCAGATCTTCAATGTATTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39804050 GATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* **
39804115 GAGATGCCAAATCATCTT-AATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
*
39804179 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39804244 CAAAGGTCAGAT-TGCTATGTCTTCGATCAGCTCTCCATTGAATATGAAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
39804308 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAA-AC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
*
39804372 CTGAAGGTCAGATCTGCTATGTCTTCAATTTGC-CCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * *
39804421 ATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATG-CTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39804485 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTTTTCTCTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39804550 GAGATGCCAAATCATCTTGGATCT-GTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
39804613 CGAT
196 CGAT
39804617 CTGTTCTCCG
Statistics
Matches: 1738, Mismatches: 183, Indels: 43
0.88 0.09 0.02
Matches are distributed among these distances:
432 98 0.06
433 28 0.02
434 93 0.05
435 234 0.13
436 373 0.21
437 506 0.29
438 249 0.14
439 157 0.09
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (440 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
Found at i:39803614 original size:656 final size:660
Alignment explanation
Indices: 39802241--39804616 Score: 3551
Period size: 656 Copynumber: 3.6 Consensus size: 660
39802231 CAATACAGAG
* * *
39802241 ATGCCAAATCTTCTTGGATCTGCTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39802306 GAACTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39802371 GAGA--CCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39802434 CGATTTGCT-CTTGTAAACACAAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTC
196 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39802497 CAAAGGTCAGATCTGCTAT-TCTTCGAACTTCTCTCCATTGAATATGGAGAT-CCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
*
39802560 CTTCGATTTGTTCTCTGACAATACAGAGATGGCAAATCATCTTGGATCTA-TTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
* * *
39802624 TTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAAGCATCTT
391 CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
* *
39802689 AGATC-TGCTTCGATGTGAAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTC
456 AGAACTTGCTTCGATGTGAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTC
* * * ** * * **
39802753 GAATATGGAGATGCCAAATCTGTTTATTCGATTTGTTCTCTGACAATATAGAGACACCAAATCAT
521 AAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCAT
* * * * *
39802818 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTATC-ATTTTCTCCTTG
586 CTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGT-TTTCGATTTACTCCTTG
39802882 TAAACACAAGA
650 TAAACACAAGA
* *
39802893 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * **** *
39802957 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGAAAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39803022 GAGATGCCAAATCATCTTGGCTCTGCTTCAGTGTAAACACCTGAAGGTC-GATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * ** * *
39803086 CGATTTGCTCCTGGTAAACACAAGAATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAAC
196 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * ** *
39803151 CAAAGGTCAGATCTACTATGTCTTCCATCTGCTCTCCGTCGAATATAAAGCTGCCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
* *
39803216 CTTTGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
39803281 CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
391 CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
* * * *
39803346 -GAACTTGATTCGATGTGAAAACATCCAAAGCTCAGTTCTGCTATGTCTTCGATCTTCTCTCCGT
456 AGAACTTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGT
*
39803410 CAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCA
520 CAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCA
* * * * * * *
39803475 TCTTAGATCCACTTTAGAGCAAACA-CTGAAGGTCAGATCTGCTATGTTTTCGATCTAC-CCCTG
585 TCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTTTTCGATTTACTCCTTG
39803538 TAAACACAAGA
650 TAAACACAAGA
* *
39803549 ATGCCAAATCGTCTTGGATCTGCTTCGATGT-AAAACATCCAAAGGTCAGATCTGCTATATCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39803613 GATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATATGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39803678 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTC-GATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * **
39803742 CAATTTACTCCTCGTAAACACAAGAATGGTAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* *
39803807 CAAATGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
* * *
39803872 CTTTGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
* * *
39803937 CTGAAGTCCAGATCTTCAATGTCTTCGATTT-CTCCTTGTAAACACAAGAATGCCAAATCATCTT
391 CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
* * * * * * *
39804001 GGACCTT-CTTCGATGTGAAACATCCAGAGGTCAGATCTTCAATGTATTAGATCTACTCTCCGTC
456 AGAACTTGCTTCGATGTGAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTC
39804065 AAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCAT
521 AAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCAT
* *
39804130 CTTA-ATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGT
586 CTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTTTTCGATTTACTCCTTGT
39804194 AAACACAAGA
651 AAACACAAGA
*
39804204 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT-TGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39804268 GATCAGCTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39804333 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * *
39804397 CAATTTGC-CCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATC
196 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* *
39804461 CAAAGGTTAGATCTGCTATG-CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
* *
39804525 CTTCGATTTTTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCT-GTTCAGTGTAAA-AC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
*
39804588 CTGAAGGTCAGATCTGCTATGTCTTCGAT
391 CTGAAGGCCAGATCTGCTATGTCTTCGAT
39804617 CTGTTCTCCG
Statistics
Matches: 1552, Mismatches: 156, Indels: 33
0.89 0.09 0.02
Matches are distributed among these distances:
651 135 0.09
652 44 0.03
653 171 0.11
654 253 0.16
655 238 0.15
656 466 0.30
657 129 0.08
658 116 0.07
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (660 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTT
CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAC
CTGAAGGCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
AGAACTTGCTTCGATGTGAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTC
AAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCAT
CTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTTTTCGATTTACTCCTTGT
AAACACAAGA
Found at i:39803687 original size:43 final size:44
Alignment explanation
Indices: 39803608--39803690 Score: 123
Period size: 43 Copynumber: 1.9 Consensus size: 44
39803598 ATCTGCTATA
* * *
39803608 TCTTCGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTGTT
1 TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATCTGTT
*
39803652 TCTTCGATATGTTCTCTGAC-AATATAGAGATGCCAAATC
1 TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATC
39803691 ATCTTGGATC
Statistics
Matches: 35, Mismatches: 4, Indels: 1
0.88 0.10 0.03
Matches are distributed among these distances:
43 18 0.51
44 17 0.49
ACGTcount: A:0.25, C:0.22, G:0.18, T:0.35
Consensus pattern (44 bp):
TCTTCGATATGTTCTCCGACGAATATAGAGATGCCAAATCTGTT
Found at i:39804302 original size:89 final size:85
Alignment explanation
Indices: 39804116--39804276 Score: 209
Period size: 88 Copynumber: 1.9 Consensus size: 85
39804106 GACAATACAG
* *
39804116 AGATGCCAAATCATCTTAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCG
1 AGATGCCAAATCATCTTAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCG
**
39804181 ATTTGCTCCTTGTAAACACA
66 ATCAGCTCCTTGTAAACACA
* *
39804201 AGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGAT-TGCTATGT
1 AG-ATGCCAAATCATCTTA-ATCCGCTTC-A-GTGAAAACA-CCTAAAGGTCAAATCTGCTATGT
39804264 CTTCGATCAGCTC
61 CTTCGATCAGCTC
39804277 TCCATTGAAT
Statistics
Matches: 65, Mismatches: 6, Indels: 7
0.83 0.08 0.09
Matches are distributed among these distances:
85 2 0.03
86 16 0.25
87 8 0.12
88 20 0.31
89 17 0.26
90 2 0.03
ACGTcount: A:0.30, C:0.24, G:0.17, T:0.30
Consensus pattern (85 bp):
AGATGCCAAATCATCTTAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCG
ATCAGCTCCTTGTAAACACA
Found at i:39805280 original size:86 final size:84
Alignment explanation
Indices: 39805097--39805255 Score: 209
Period size: 87 Copynumber: 1.9 Consensus size: 84
39805087 TGACAATACA
* *
39805097 GAGATGCC-AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
1 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTT
39805161 CGATTTCTCCTTGTAAACAC
66 CGATTTCTCC-TGTAAACAC
*
39805181 AAGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTA-G
1 GAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGAAAACA-CCTAAAGGTCAGATCTGCTATG
*
39805243 TCTTCGATCTCTC
62 TCTTCGATTTCTC
39805256 TCCGTCAATA
Statistics
Matches: 66, Mismatches: 4, Indels: 8
0.85 0.05 0.10
Matches are distributed among these distances:
84 2 0.03
85 18 0.27
86 20 0.30
87 24 0.36
88 2 0.03
ACGTcount: A:0.27, C:0.23, G:0.19, T:0.31
Consensus pattern (84 bp):
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTT
CGATTTCTCCTGTAAACAC
Found at i:39805842 original size:85 final size:83
Alignment explanation
Indices: 39805745--39805899 Score: 219
Period size: 85 Copynumber: 1.8 Consensus size: 83
39805735 CAATACAGAG
39805745 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCC--AAGGTCAGATCTGCTATGT-TT
*
39805806 CGATTTGCTCTTGTAAACACAAGA
61 -GATCTGCTCTTGTAAACACAAGA
39805830 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACATCCAAGGTCAGATCTGCTATGTTTGATCT
1 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACATCCAAGGTCAGATCTGCTATGTTTGATCT
39805895 GCTCT
66 GCTCT
39805900 CCGTCAATAT
Statistics
Matches: 65, Mismatches: 1, Indels: 10
0.86 0.01 0.13
Matches are distributed among these distances:
83 9 0.14
84 11 0.17
85 40 0.62
86 5 0.08
ACGTcount: A:0.26, C:0.23, G:0.19, T:0.32
Consensus pattern (83 bp):
ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACATCCAAGGTCAGATCTGCTATGTTTGATCT
GCTCTTGTAAACACAAGA
Found at i:39806096 original size:645 final size:659
Alignment explanation
Indices: 39804553--39809456 Score: 7785
Period size: 645 Copynumber: 7.6 Consensus size: 659
39804543 CAATACAGAG
**
39804553 ATGCCAAATCATCTTGGATCTG-TTC-A-GTGTAAAAC--CTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCCAAAGGTCAGATCTGCTATGTCTT
* * * **
39804613 CGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-T-TCT--C-AT--
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATAC
* * * *
39804671 --ATATG-TAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* *
39804733 TCGACTTGCTCCTTGTAAACACCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39804797 CCAAAGGTCA-ATCT-CTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
39804860 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC-TCTTGGATCTGCTTCAGTGTAAA-A
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
39804923 CCTGAA-GTCAGATCTGCTATG-CTTCGATTT-CTCCTTGTAAACACAAGAA-GCCAAATCATCT
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
*
39804984 TGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGT
455 TGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT
*
39805048 CGAATATGGAGATGCCAAATC-GTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-AATCA
520 CGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCA
39805110 TCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTT-CTCCTTG
585 TCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT-CTTG
39805174 TAAACACAAGA
649 TAAACACAAGA
39805185 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805248 GATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTC-TTCATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
*
39805310 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805375 -GATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39805437 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
39805501 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39805566 CTGAAGGTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACACAAGAATGCCAAATCATCTT
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
39805629 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
456 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
39805694 GAATATGGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
521 GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
39805757 CTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
586 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
39805821 AACACAAGA
651 AACACAAGA
39805830 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT-TT-
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805890 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
39805954 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39806019 CAATTT-CTCCTTGTAAACACAAGAAT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39806082 CAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCC-AATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
39806146 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39806211 CTGAA-GTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
39806275 GGATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
456 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
*
39806339 -AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGA-ATGCCAAATCAT
521 GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
*
39806402 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTTC-ATTTGCTCCTTGT
586 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT-CTTGT
39806466 AAACACAAGA
650 AAACACAAGA
39806476 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39806541 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTC-TTCAATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
* *
39806605 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
**
39806669 CGATTTGCT-CTTGTAAACACAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39806733 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCAT-GAATAT-GAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39806795 CTT-GATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTT-AGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* *
39806858 CTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTT
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
* *
39806923 -GATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGTCTTCGATCTACTCTCCGTC
456 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
39806986 GAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACAGAGATG-CAAATCAT
521 GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
*
39807048 CTTGGATC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
586 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
39807108 AACAC-AGA
651 AACACAAGA
39807116 ATGCCAAATC-T-TTGGATCTG-TTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39807177 GA-CTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
*
39807241 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807305 CGA-TTGCTCC-TGTAAACACAAGAATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39807365 CAAAGGTCAGATCTGCTA-GTCTTCGATCTACTCTCCGTCGAATAT-GAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39807428 CTTCGATTTGTTC-CTGACAATACAGAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39807490 CTGAAGGTCA-ATCTACTAT-TCTTCGATTTGCTCCTTGT-AAC-CAAGAATGCCAAATCATCTT
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
39807551 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
456 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
* * *
39807616 -AATATGGAG-TG-CAAATCTGTTTCTT--AATCGCTCTCTGACAATACAGAGATGCCAAATCAT
521 GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
*
39807676 CTTGGCTCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATG-CTTCGATTTGCTCTTGTA
586 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
39807739 AACACAAGA
651 AACACAAGA
* *
39807748 ATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39807810 GATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
* *
39807874 GAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39807938 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39808003 CAAAGGT-AGAT-TGCTATGTCTT-GATCTGCTCTCCGTCAAATATGGAGATG-CAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *** * *
39808064 CTTC-AATCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39808128 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATCATCTT
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
39808192 GGATCTGC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
456 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
*
39808256 GAATATGGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAATACAGAGATGCCAAATCAT
521 GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
* * * *
39808319 CTTGGATCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTTCAATTTACTCCTTGT
586 CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT-CTTGT
39808384 AAACACAAGA
650 AAACACAAGA
* * * *
39808394 ATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39808459 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
* * *
39808523 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39808588 CGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
39808652 C-AAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39808716 CTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39808781 CTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
391 CTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
39808845 TGGA-CTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT-CGT
455 TGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT
* * * *
39808907 CAAATATGGAGATGCCAAATCTGTTTCTTCAATTCGCTCTCTGACAATACAGAGATGCCAAATCA
520 CGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCA
* * * *
39808972 TCTTAGATCCGCTTCAGTGTAAACACCTGAA-GTCAAATCTGCTATGTCTTCGTTTTGCTCTTGT
585 TCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGT
39809036 AAACAC-AGA
650 AAACACAAGA
**
39809045 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39809109 GATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
* * * * *
39809172 GAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATGTTTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39809234 CGATTTGCT-CTTGTAAACAC-AGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * *
39809296 CAAAGGTCAGATCTTCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39809361 CTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAAC
* *
39809426 ATCC-AAAGGTCAGATCTGCTACGTCTTCGAT
389 A-CCTGAAGGTCAGATCTGCTATGTCTTCGAT
39809457 CTACTCTCCG
Statistics
Matches: 3988, Mismatches: 161, Indels: 231
0.91 0.04 0.05
Matches are distributed among these distances:
627 23 0.01
628 45 0.01
629 55 0.01
630 51 0.01
631 63 0.02
632 175 0.04
633 171 0.04
634 66 0.02
635 114 0.03
636 174 0.04
637 51 0.01
638 52 0.01
639 25 0.01
640 203 0.05
641 174 0.04
642 29 0.01
643 167 0.04
644 287 0.07
645 502 0.13
646 309 0.08
647 141 0.04
648 185 0.05
649 185 0.05
650 163 0.04
651 241 0.06
652 84 0.02
653 162 0.04
654 91 0.02
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (659 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT
GGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC
GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCAT
CTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTTGTA
AACACAAGA
Found at i:39806307 original size:217 final size:220
Alignment explanation
Indices: 39804553--39809456 Score: 7802
Period size: 217 Copynumber: 22.9 Consensus size: 220
39804543 CAATACAGAG
**
39804553 ATGCCAAATCATCTTGGATCTG-TTC-A-GTGTAAAAC--CTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCCAAAGGTCAGATCTGCTATGTCTT
* * * *
39804613 CGATCTGTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG-T-TCT--C-AT--
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * *
39804671 --ATATG-TAAATCATCTTAGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* *
39804733 TCGACTTGCTCCTTGTAAACACCAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
39804759 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39804821 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39804886 GAGATGCCAAATC-TCTTGGATCTGCTTCAGTGTAAA-ACCTGAA-GTCAGATCTGCTATG-CTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39804947 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39804971 A-GCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805034 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATC-GTTTCTTTGATTTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805097 GAGATGCC-AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805161 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805185 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805248 GATCT-CTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39805310 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805375 -GATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805399 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805462 GATCTGCT-TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805526 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805591 C-ATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805614 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39805679 GATCTGCTCTCCGTCGAATATGGAGATGCC-AATCTGTTT-TTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805742 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39805806 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39805830 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT-TT-
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39805890 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39805954 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39806019 CAATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39806043 AT-TCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806107 GATCTACTCTCCGTCGAATATGGAGATGCC-AATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39806171 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806235 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39806260 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806324 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39806388 GA-ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806452 C-ATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39806476 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39806541 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39806605 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39806669 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
**
39806693 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806758 GATCTGCT-TCCAT-GAATAT-GAGATGCCAAATCTGTTTCTT-GATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39806819 GAGATGCCAAATCATCTTGGATCTACTT-AGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39806883 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39806908 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTG-TATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39806971 GATCTACTCTCCGTCGAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807034 GAGATG-CAAATCATCTTGGATC--ATTCAG-GTAAACA--TGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807093 CGATTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807116 ATGCCAAATC-T-TTGGATCTG-TTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807177 GA-CTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807241 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807305 CGA-TTGCTCC-TGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807328 ATGCC-AATCATCTT-GATCTGCTTCGA-GTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39807389 GATCTACTCTCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTC-CTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807452 GAGA-CCCAAATCATCTTGGAT-TGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTAT-TCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807513 CGATTTGCTCCTTGT-AAC-CAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39807536 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807601 GATCTGCTCTCCGTC-AATATGGAG-TG-CAAATCTGTTTCTT--AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39807661 GAGATGCCAAATCATCTTGGCTCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATG-CTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807724 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39807748 ATGCCAAATCATCTTGTATCTGCTTTG-TGTGAAAACA-CCAAAGGTCAGA-CTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39807810 GATCTAC-CTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39807874 GAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39807938 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39807963 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGT-AGAT-TGCTATGTCTT-
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ***
39808025 GATCTGCTCTCCGTCAAATATGGAGATG-CAAATCTGTTTCTTC-AATCCCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39808088 GAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39808153 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39808178 ATG-CAAATCATCTTGGATCTGC-TCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808241 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGA-TTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39808304 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39808369 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39808394 ATTCTAAATCATCTTGGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808459 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39808523 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39808588 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39808613 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39808676 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39808741 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39808805 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
39808831 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39808894 GATCTGCTCT-CGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATTCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39808958 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAA-GTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39809022 CGTTTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
**
39809045 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39809109 GATCTGCTCTCCATTGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39809172 GAGA-GCCAAATCATCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATGTTTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39809234 CGATTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39809257 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTATGTATTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39809321 GATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39809386 GAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTACGT
131 GAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGT
39809450 CTTCGAT
193 CTTCGAT
39809457 CTACTCTCCG
Statistics
Matches: 4390, Mismatches: 173, Indels: 257
0.91 0.04 0.05
Matches are distributed among these distances:
205 61 0.01
206 36 0.01
207 101 0.02
208 66 0.02
209 109 0.02
210 159 0.04
211 253 0.06
212 445 0.10
213 386 0.09
214 510 0.12
215 470 0.11
216 593 0.14
217 623 0.14
218 436 0.10
219 142 0.03
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39806357 original size:88 final size:84
Alignment explanation
Indices: 39806171--39806332 Score: 227
Period size: 88 Copynumber: 1.9 Consensus size: 84
39806161 TGACAATACA
*
39806171 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGTCAGATCTGCTATGTCTTC
1 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACC-GAAGTCAGATCTGCTATGTCTTC
* *
39806236 GATTTGCTCCTTGTAAACAC
65 GATCTGCTCCTCGTAAACAC
*
39806256 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGT
1 GAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGAAAACA-CCGAA-GTCAGATCTGCTATGT
39806320 CTTCGATCTGCTC
61 CTTCGATCTGCTC
39806333 TCCGTCAATA
Statistics
Matches: 69, Mismatches: 3, Indels: 7
0.87 0.04 0.09
Matches are distributed among these distances:
85 2 0.03
86 26 0.38
87 3 0.04
88 36 0.52
89 2 0.03
ACGTcount: A:0.27, C:0.23, G:0.19, T:0.31
Consensus pattern (84 bp):
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCGAAGTCAGATCTGCTATGTCTTCG
ATCTGCTCCTCGTAAACAC
Found at i:39806491 original size:86 final size:89
Alignment explanation
Indices: 39806387--39806549 Score: 253
Period size: 88 Copynumber: 1.9 Consensus size: 89
39806377 CTGACAATAC
* *
39806387 AGAATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTACTATGT
1 AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTACTATGT
*
39806449 CTTC-ATTTGCTCCTTGTAAACACA
65 CTTCGATCTGCTCCTTGTAAACACA
*
39806473 AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTC
1 AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTC
39806538 TTCGATCTGCTC
66 TTCGATCTGCTC
39806550 TCCGTCAAAT
Statistics
Matches: 69, Mismatches: 4, Indels: 5
0.88 0.05 0.06
Matches are distributed among these distances:
86 29 0.42
87 1 0.01
88 30 0.43
89 9 0.13
ACGTcount: A:0.28, C:0.23, G:0.18, T:0.31
Consensus pattern (89 bp):
AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTC
TTCGATCTGCTCCTTGTAAACACA
Found at i:39806593 original size:43 final size:43
Alignment explanation
Indices: 39806536--39806617 Score: 103
Period size: 42 Copynumber: 1.9 Consensus size: 43
39806526 ATCTGCTATG
* * **
39806536 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCTGCTCTCCGAC-AATACAGAGATGCCAAATCTGTT
*
39806580 TCTTCAATC-GCTCTCTGACAATACAGAGATGCCAAATC
1 TCTTCAATCTGCTCTCCGACAATACAGAGATGCCAAATC
39806618 ATCTTAGATC
Statistics
Matches: 33, Mismatches: 5, Indels: 2
0.82 0.12 0.05
Matches are distributed among these distances:
42 17 0.52
43 8 0.24
44 8 0.24
ACGTcount: A:0.27, C:0.27, G:0.16, T:0.30
Consensus pattern (43 bp):
TCTTCAATCTGCTCTCCGACAATACAGAGATGCCAAATCTGTT
Found at i:39808843 original size:87 final size:87
Alignment explanation
Indices: 39808744--39808902 Score: 227
Period size: 87 Copynumber: 1.8 Consensus size: 87
39808734 CAATACAGAG
* *
39808744 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAAGGT-CA-ATCTGCTATGTCT
*
39808805 TCGATTTGCTCCTTGTAAACACAAGA
62 TCGATCTGCTCCTTGTAAACACAAGA
39808831 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAAACATCCAAAGGTCAATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAAACATCCAAAGGTCAATCTGCTATGTCTTCGA
39808896 TCTGCTC
66 TCTGCTC
39808903 TCGTCAAATA
Statistics
Matches: 65, Mismatches: 3, Indels: 8
0.86 0.04 0.11
Matches are distributed among these distances:
86 7 0.11
87 42 0.65
88 12 0.18
89 4 0.06
ACGTcount: A:0.27, C:0.25, G:0.18, T:0.31
Consensus pattern (87 bp):
ATGCCAAATCATCTTGGACTGCTTCGATGTGAAAACATCCAAAGGTCAATCTGCTATGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39808922 original size:87 final size:86
Alignment explanation
Indices: 39808741--39808927 Score: 213
Period size: 87 Copynumber: 2.2 Consensus size: 86
39808731 TGACAATACA
* *
39808741 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGTCCAGATCTGCTATGTCTT
1 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGTCCAGATCTGCTATGTCTT
* *
39808806 CGATTTGCTCCTTGTAAACAC
66 CGATCTGCTCCTCGTAAACAC
*
39808827 AAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCC-AAAGGT-CA-ATCTGCTAT
1 GAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGAAAACA-CCTAAA-GTCCAGATCTGCTAT
* *
39808888 GTCTTCGATCTGCT-CTCGTCAAATATG
61 GTCTTCGATCTGCTCCTCGT-AAACA-C
39808915 GAGATGCCAAATC
1 GAGATGCCAAATC
39808928 TGTTTCTTCA
Statistics
Matches: 86, Mismatches: 8, Indels: 13
0.80 0.07 0.12
Matches are distributed among these distances:
86 13 0.15
87 55 0.64
88 14 0.16
89 4 0.05
ACGTcount: A:0.28, C:0.24, G:0.19, T:0.29
Consensus pattern (86 bp):
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGTCCAGATCTGCTATGTCTT
CGATCTGCTCCTCGTAAACAC
Found at i:39809070 original size:84 final size:87
Alignment explanation
Indices: 39808955--39809118 Score: 212
Period size: 86 Copynumber: 1.9 Consensus size: 87
39808945 CTCTGACAAT
* *
39808955 ACAGAGATGCCAAATCATCTTAGATCCGCTTC-A-GTGTAAACA-CCTGAA-GTCAAATCTGCTA
1 ACAGAGATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCC-AAAGGTCAAATCT-CTA
* *
39809016 TGTCTTCGTTTTGCTCTTGTAAAC
64 TGTCTTCGATCTGCTCTTGTAAAC
* * *
39809040 ACAGA-ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTCTATG
1 ACAGAGATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCCAAAGGTCAAATCTCTATG
39809104 TCTTCGATCTGCTCT
66 TCTTCGATCTGCTCT
39809119 CCATTGAATA
Statistics
Matches: 68, Mismatches: 7, Indels: 7
0.83 0.09 0.09
Matches are distributed among these distances:
84 24 0.35
85 6 0.09
86 28 0.41
87 10 0.15
ACGTcount: A:0.29, C:0.24, G:0.16, T:0.32
Consensus pattern (87 bp):
ACAGAGATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATCCAAAGGTCAAATCTCTATG
TCTTCGATCTGCTCTTGTAAAC
Found at i:39809458 original size:133 final size:133
Alignment explanation
Indices: 39809252--39809587 Score: 475
Period size: 133 Copynumber: 2.6 Consensus size: 133
39809242 TCTTGTAAAC
* * *
39809252 ACAGA-ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTTCTAT
1 ACAGAGATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAT
* * *
39809315 GTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGAC
66 GTCTTCGATCTACTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGAC
39809380 AAT
131 AAT
* *
39809383 ACAGAGATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAC
1 ACAGAGATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAT
* * *
39809448 GTCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGAC
66 GTCTTCGATCTACTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGAC
39809513 AAT
131 AAT
* ** * **
39809516 ACAGAGATGGCAAATCATCTTGGATCTATTTC-A-GTGTAAACA-CTTGAAGGTCAGATCTGCTA
1 ACAGAGATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC-CAAAGGTCAGATCTGCTA
39809578 TGTCTTCGAT
65 TGTCTTCGAT
39809588 TTGCTCCTTG
Statistics
Matches: 183, Mismatches: 19, Indels: 6
0.88 0.09 0.03
Matches are distributed among these distances:
130 1 0.01
131 38 0.21
132 12 0.07
133 132 0.72
ACGTcount: A:0.27, C:0.21, G:0.18, T:0.34
Consensus pattern (133 bp):
ACAGAGATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTAT
GTCTTCGATCTACTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGAC
AAT
Found at i:39809539 original size:778 final size:788
Alignment explanation
Indices: 39808613--39810243 Score: 2512
Period size: 778 Copynumber: 2.1 Consensus size: 788
39808603 AAACACAAGA
39808613 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCCAAGGTCAGATCTGCTATGTCTTCG
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAGGTCAGATCTGCTATGTCTTCG
* *
39808677 ATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAG
66 ATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAG
*
39808742 AGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCTT
131 AGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCTT
*
39808806 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATC
195 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATC
*
39808870 CAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT-CGTCAAATATGGAGATGCCAAATCTGTTT
260 CAAAGGTCAGATCTGCTA-GTCTTCGATCTACTCTCCGTC-AATATGGAGATGCCAAAT-TGTTT
* **
39808933 CTTCAATTCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACAC
322 ATTCAATTCGCTCTCTGACAATACAGAGACACCAAATCATCTTAGATCCGCTTCAGTGTAAACAC
* *
39808998 CTGAA-GTCAAATCTGCTATGTCT-TCGTTTTGCT-CTTGTAAACAC-AGAATGCCAAATCATCT
387 CTGAAGGTCAAATCTACTATGTCTATCATTTT-CTCCTTGTAAACACAAGAATGCCAAATCATCT
*
39809059 TATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT-CTATGTCTTCGATCTGCTCTCCAT
451 TAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCAT
** ** ****
39809123 TGAATAT-GA-ATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGA-GCCAAATCA
516 CAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCA
* *
39809185 TCTTGGATC-GATTCAGAGTAAACA-ATAAAGGTCAGATCTGCTATGTTTTCGATTTGCT-CTTG
581 TCTTGGATCTGATTCAGAGTAAACACATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTGG
* * **
39809247 TAAACAC-AGAATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCT
646 TAAACACAAGAATGCCAAATAATATTGGATCTGCTTCGATGTGAAAACAACCAAAGGTCAGATCT
* * *
39809310 TCTATGTATTCGATCTTCTCTCCATCAAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCT
711 GCTATGTATTCGATCTGCTCTCCATCAAATATA-AGATGCCAAATCTATTTCTTTGATTTGTTCT
39809375 CTGACAATACAGAG
775 CTGACAATACAGAG
* *
39809389 ATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
39809454 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
65 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39809519 GAGATGGCAAATCATCTTGGATCTATTTCAGTGTAAACACTTGAAGGTCAGATCTGCTATGTCTT
130 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39809584 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATC
195 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATC
39809649 CAAAGGTCAGATCTGCTAGTCTTCGATCTACTCTCCGTCAATATGGAGATGCCAAATTGTTTATT
260 CAAAGGTCAGATCTGCTAGTCTTCGATCTACTCTCCGTCAATATGGAGATGCCAAATTGTTTATT
* * * * * *
39809714 CGATTTGTTCTCTGACAATATAGAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTG
325 CAATTCGCTCTCTGACAATACAGAGACACCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTG
* *
39809779 AAGGTCAAATCTACTATGTCTATCATTTTCTCCTTGTAAACACAAGAATGCCAAATCATTTTGGA
390 AAGGTCAAATCTACTATGTCTATCATTTTCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGA
* * *
39809844 TCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAA
455 TCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATCAAA
39809909 TATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCATCTT
520 TATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCATCTT
* * * * *
39809974 GGCTCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTGGTAAA
585 GGATCTGATTCAGAGTAAACACATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTGGTAAA
** *
39810039 CACAAGAATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACCAAAGGTCAGATCTGCTA
650 CACAAGAATGCCAAATAATATTGGATCTGCTTCGATGTGAAAACAACCAAAGGTCAGATCTGCTA
* * *
39810104 TGTCTTCGATCTGCTCTCCGTCGAATATAAGATGCCAAATCTATTTCTTTGATTTGTTCTCTGAC
715 TGTATTCGATCTGCTCTCCATCAAATATAAGATGCCAAATCTATTTCTTTGATTTGTTCTCTGAC
39810169 AATACAGAG
780 AATACAGAG
* * *
39810178 ATGCCAAATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGCCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC--AAGGTCAGATCTGCTATGTCTT
39810240 CGAT
64 CGAT
39810244 TTGCTCCTGT
Statistics
Matches: 774, Mismatches: 61, Indels: 29
0.90 0.07 0.03
Matches are distributed among these distances:
776 17 0.02
777 22 0.03
778 251 0.32
779 84 0.11
780 29 0.04
781 52 0.07
782 28 0.04
783 2 0.00
784 38 0.05
785 17 0.02
786 15 0.02
787 63 0.08
788 11 0.01
789 82 0.11
790 63 0.08
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.33
Consensus pattern (788 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAGGTCAGATCTGCTATGTCTTCG
ATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAG
AGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTC
GATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC
AAAGGTCAGATCTGCTAGTCTTCGATCTACTCTCCGTCAATATGGAGATGCCAAATTGTTTATTC
AATTCGCTCTCTGACAATACAGAGACACCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGA
AGGTCAAATCTACTATGTCTATCATTTTCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGAT
CTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATCAAAT
ATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAGAGATGCCAAATCATCTTG
GATCTGATTCAGAGTAAACACATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTGGTAAAC
ACAAGAATGCCAAATAATATTGGATCTGCTTCGATGTGAAAACAACCAAAGGTCAGATCTGCTAT
GTATTCGATCTGCTCTCCATCAAATATAAGATGCCAAATCTATTTCTTTGATTTGTTCTCTGACA
ATACAGAG
Found at i:39810359 original size:86 final size:84
Alignment explanation
Indices: 39810175--39810336 Score: 195
Period size: 86 Copynumber: 1.9 Consensus size: 84
39810165 TGACAATACA
*
39810175 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
1 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACC-GAAAGCCAGATCTGCTATGTCTT
*
39810240 CGATTTGCTCCTGTAAACAC
65 CGATCTGCTCCTGTAAACAC
* * * *
39810260 AAGAATGCCAAATCGTCTTGGATCTGCTTC-GATGTAAAACATCC-AAAGTCAGATCTGCTAT-T
1 GAG-ATGCCAAATCATCTTGGATCTACTTCAG-TGT-AAACA-CCGAAAGCCAGATCTGCTATGT
39810322 CTTCGATCTGTCTCC
62 CTTCGATCTG-CTCC
39810337 GTCGAATATG
Statistics
Matches: 66, Mismatches: 6, Indels: 9
0.81 0.07 0.11
Matches are distributed among these distances:
85 13 0.20
86 46 0.70
87 5 0.08
88 2 0.03
ACGTcount: A:0.27, C:0.25, G:0.18, T:0.30
Consensus pattern (84 bp):
GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCGAAAGCCAGATCTGCTATGTCTTC
GATCTGCTCCTGTAAACAC
Found at i:39810368 original size:43 final size:43
Alignment explanation
Indices: 39810320--39810402 Score: 105
Period size: 43 Copynumber: 1.9 Consensus size: 43
39810310 AGATCTGCTA
* * **
39810320 TTCTTCGATCTG-TCTCCGTCGAATATGGAGATGCCAAATCTGT
1 TTCTTCGATATGTTCTCCGAC-AATACAGAGATGCCAAATCTGT
*
39810363 TTCTTCGATATGTTCTCTGACAATACAGAGATGCCAAATC
1 TTCTTCGATATGTTCTCCGACAATACAGAGATGCCAAATC
39810403 ATCTTGGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 2
0.83 0.12 0.05
Matches are distributed among these distances:
43 28 0.82
44 6 0.18
ACGTcount: A:0.25, C:0.23, G:0.18, T:0.34
Consensus pattern (43 bp):
TTCTTCGATATGTTCTCCGACAATACAGAGATGCCAAATCTGT
Found at i:39810704 original size:216 final size:220
Alignment explanation
Indices: 39809389--39816711 Score: 11469
Period size: 216 Copynumber: 33.9 Consensus size: 220
39809379 CAATACAGAG
* *
39809389 ATGCCAAATCTTCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39809454 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* ** *
39809519 GAGATGGCAAATCATCTTGGATCTATTTCAGTGTAAACACTTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39809584 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39809609 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39809673 GATCTACTCTCCGTC-AATATGGAGATGCCAAAT-TGTTTATTCGATTTGTTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39809736 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTA
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT-
*
39809801 TC-ATTTTCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * *
39809826 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ****
39809891 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39809956 GAGATGCCAAATCATCTTGGCTCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39810021 CGATTTGCTCCTGGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * ** * *
39810046 ATGCCAAATAATATTGTTTCTGCTTTGATGTGAAAACAACCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39810111 GATCTGCTCTCCGTCGAATAT-AAGATGCCAAATCTATTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39810175 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39810240 CGATTTGCTCC-TGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39810264 ATGCCAAATCGTCTTGGATCTGCTTCGATGT-AAAACATCCAAA-GTCAGATCTGCTAT-TCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39810326 GATCTG-TCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATATGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39810390 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39810455 C-ATTTACTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39810479 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAA-GTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39810542 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTATTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39810607 GAGATG-CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCAGATCTTC-ATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39810669 CGATTTTCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39810694 ATGCCAAATCATCTTGGACCTTCTTCGATGTG-AAACATCC-AAGGTCAGATCTGCTATGT-TTA
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39810756 GATCTACTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39810820 GAGATGCCAAATCATCTT-AATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39810884 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39810909 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCTAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39810974 GATCTGCTCTCCATTGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39811038 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAA-ACCTGAAGGTCAGATCTG-TATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39811101 CAATTTGC-CCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39811125 ATGCCAAATCATCTTGGATCTGCTTCGA--TGCAAACATCCAAAGGTTAGATCTGCTATG-CTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39811187 GATCTGCTCTCCGTTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCT-ACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39811251 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39811316 CAATTTACTCCTCGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39811341 ATTCTAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39811406 GATCTGCTCTCCGTCGAATATGGAGATGCCAATTCTGTTTTTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39811471 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39811535 TCGATTTGCT-CTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
39811560 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACA-CCAAAGGTCAGATCTGC-ATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39811621 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39811686 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGG-CAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39811750 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39811775 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** * * * *
39811840 GATCTGCTCTGCATTGAATATGGAGATGGTAAATATATTTCTTTGATTTGTTCTCTAACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39811905 GAGATTG-CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCT
131 GAGA-TGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* * * * **
39811969 TTGATCTGCT-CTCCGTCAAATA-TGGA
195 TCGATTTGCTCCT-TGT-AAACACAAGA
* ** ** * * * * * *
39811995 GATGCCAAATCTGTTTCTTCAATCCAC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * * * *
39812050 -TCTTGGCTCTGCT-TCATGT-AAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC
60 GTCTTCGATCTGCTCTC-CGTCGAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
* * *
39812110 -CTGGTA-AACACA-AGATGCCAAATCATCTTTGATCTGCTTC-GATGTAAAAACATCC-AAAGG
119 TCT-G-ACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAG-TGT--AAACA-CCTGAAGG
*
39812170 TCAGATCTGCTATGTCTTCGATTTGCTCCTGGTAAACACAAG-
178 TCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * *
39812212 ATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTACTATATCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39812277 GATCTTCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39812341 GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39812406 CGATTTGCT-CTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
**
39812430 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39812495 GATCTGCTCTCCATTGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39812560 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGAT-TGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39812624 C-ATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39812648 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39812712 GATCTGCTCTCCGTCGAATATGGAGATG-CAAATCTG-TTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39812775 GAGATGTCAAATCATCTTGGATC--ATTCAGAGTAAACA--T-AAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39812835 CGATTTGCT-CTTGT-AACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39812857 ATGCCAAATCAT-TTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39812921 GATCTTCTCTCCATC-AATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39812984 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39813049 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39813074 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39813139 GATCTACTCTCCGTCGAATAT-GAGATGCCAAATCT-TTTCTTCGATTT-CTC-CTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39813200 GAGA--CCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39813262 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39813286 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39813351 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39813416 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39813481 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39813506 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39813571 GATCT-CTCTCCGTTGAATAT-GAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39813634 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCA-ATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39813698 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39813722 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39813787 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTC-T--AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39813848 GAGATGCCAAATCATCTTGG-TCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39813912 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39813937 ATGCCAAATCATCTT-GATCTGCTT-GATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39814000 GATCT-CTCTCCGTCGAATATAGAGATGCCAAATCTATTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39814064 GAGATGCC-AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGG-CAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39814127 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39814152 ATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39814215 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCTGCTCTCTGACAATAC-
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39814279 GAGATGCCAAATCATCTTAGATC-GCTTCAGTGTAAA-ACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39814341 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39814366 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39814429 GATCTGCTCTCCAT-GAATAT-GAGATGCCAAATCTGTTTCTT-GATTTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39814490 GA-ATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39814554 C-ATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39814578 ATGCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39814641 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39814705 GAGA--CCAAATCATCTTGGATCTGCTTCA-TGTAAACA-CTGAAGGTCA-ATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39814765 CGATTT-CTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39814789 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39814854 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTT--AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39814917 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39814982 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39815007 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39815071 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTC-ATTTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39815134 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGG-CAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39815198 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39815223 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39815287 GATCT-CTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCT-TGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39815350 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA-CTGAAGGTCAGATCT-CTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39815413 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39815438 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39815503 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTT-GATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39815567 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39815632 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39815657 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39815722 GATCTGCTCTCCGTC-AATATGGAGATGCCAAATCTGTTTCTTC-AATCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39815785 GAGATGCCAAATCATCTT-GATCTGCTTCAGTGTAAACACCTGAAGGTCA-ATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39815848 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39815873 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39815938 GATCTGCTCTCCAT-GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39816002 GAGATG-CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39816066 C-ATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39816090 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39816154 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39816219 GAGATGCCAAATCATCTTGGATC--ATTCAG-GTAAACA-CT-AAGGTCAGATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39816279 CGATTTGCT-CTTGTAAACAC-AGA
196 CGATTTGCTCCTTGTAAACACAAGA
39816302 ATGCCAAATCAT-TTGGATCTGCTTC-ATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39816364 GATCT-CTCTCC-TCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39816427 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39816492 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
39816517 ATGCCAAATCATCTTGGA-C-GCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTA-GTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39816579 GATCT-CTCT-CGTCGAATA---AGATG-C-AATCTCATGTCTTCGATTTACTC-CTTGTA-AAC
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-GTTTCTTCGATTTGTTCTC-TG-ACAAT
* * *
39816635 ACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC-AAAGGT-AGATCTG-TA
128 ACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACACCTGAAGGTCAGATCTGCTA
*
39816696 TGTCTTCGATCTGCTC
190 TGTCTTCGATTTGCTC
39816712 TCCGTCAAAT
Statistics
Matches: 6593, Mismatches: 332, Indels: 366
0.90 0.05 0.05
Matches are distributed among these distances:
207 6 0.00
208 89 0.01
209 130 0.02
210 110 0.02
211 189 0.03
212 312 0.05
213 464 0.07
214 595 0.09
215 822 0.12
216 1037 0.16
217 889 0.13
218 796 0.12
219 615 0.09
220 470 0.07
221 26 0.00
222 17 0.00
223 19 0.00
224 7 0.00
ACGTcount: A:0.28, C:0.23, G:0.18, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39810967 original size:89 final size:86
Alignment explanation
Indices: 39810823--39810982 Score: 239
Period size: 89 Copynumber: 1.8 Consensus size: 86
39810813 CAATACAGAG
* *
39810823 ATGCCAAATCATCTTAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGAT
1 ATGCCAAATCATCTTAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGAT
*
39810888 TTGCTCCTTGTAAACACAAGA
66 CTGCTCCTTGTAAACACAAGA
* * *
39810909 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCTAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTA-ATCCGCTTC-A-GTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTC
39810974 GATCTGCTC
63 GATCTGCTC
39810983 TCCATTGAAT
Statistics
Matches: 65, Mismatches: 6, Indels: 3
0.88 0.08 0.04
Matches are distributed among these distances:
86 16 0.25
87 8 0.12
88 1 0.02
89 40 0.62
ACGTcount: A:0.29, C:0.24, G:0.16, T:0.31
Consensus pattern (86 bp):
ATGCCAAATCATCTTAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGAT
CTGCTCCTTGTAAACACAAGA
Found at i:39811574 original size:86 final size:84
Alignment explanation
Indices: 39811474--39811630 Score: 230
Period size: 86 Copynumber: 1.8 Consensus size: 84
39811464 CAATACAGAG
*
39811474 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACACCTGAA-GTCCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGA-CTGCTTCGATGTG-AAACACC-AAAGGT-CAGATCTGC-ATGTCTT
*
39811536 CGATTTGCTCTTGTAAACACAAGA
61 CGATCTGCTCTTGTAAACACAAGA
39811560 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACACCAAAGGTCAGATCTGCATGTCTTCGATC
1 ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACACCAAAGGTCAGATCTGCATGTCTTCGATC
39811625 TGCTCT
66 TGCTCT
39811631 CCGTCAAATA
Statistics
Matches: 66, Mismatches: 2, Indels: 8
0.87 0.03 0.11
Matches are distributed among these distances:
84 17 0.26
85 18 0.27
86 28 0.42
87 3 0.05
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (84 bp):
ATGCCAAATCATCTTGGACTGCTTCGATGTGAAACACCAAAGGTCAGATCTGCATGTCTTCGATC
TGCTCTTGTAAACACAAGA
Found at i:39811650 original size:86 final size:85
Alignment explanation
Indices: 39811471--39811655 Score: 218
Period size: 86 Copynumber: 2.2 Consensus size: 85
39811461 TGACAATACA
*
39811471 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGTCCAGATCTGCTATGTCTT
1 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGTCCAGATCTGCTATGTCTT
* *
39811536 CGATTTGCTCTTGTAAACAC
66 CGATCTGCTCTCGTAAACAC
*
39811556 AAGAATGCCAAATCATCTTGGA-CTGCTTC-GATGTGAAACACC-AAAGGT-CAGATCTGC-ATG
1 GAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAACACCTAAA-GTCCAGATCTGCTATG
* *
39811616 TCTTCGATCTGCTCTCCGTCAAATATG
62 TCTTCGATCTGCTCT-CGT-AAACA-C
39811643 GAGATGCCAAATC
1 GAGATGCCAAATC
39811656 TGTTTCTTTG
Statistics
Matches: 86, Mismatches: 7, Indels: 13
0.81 0.07 0.12
Matches are distributed among these distances:
84 18 0.21
85 25 0.29
86 41 0.48
87 2 0.02
ACGTcount: A:0.28, C:0.24, G:0.19, T:0.29
Consensus pattern (85 bp):
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGTCCAGATCTGCTATGTCTT
CGATCTGCTCTCGTAAACAC
Found at i:39811848 original size:89 final size:86
Alignment explanation
Indices: 39811689--39811848 Score: 241
Period size: 89 Copynumber: 1.8 Consensus size: 86
39811679 CAATACAGAG
* * *
39811689 ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCAGATCTGCTATGTCTTCGAT
1 ATGCCAAATCATCTTGGACCTGCTTCAGTGAAAACACCTAAAGGCAGATCTGCTATGTCTTCGAT
*
39811754 TTGCTCCTTGTAAACACAAGA
66 CTGCTCCTTGTAAACACAAGA
39811775 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGACCTGCTTC-A-GTGAAAACA-CCTAAAGG-CAGATCTGCTATGTCTT
39811839 CGATCTGCTC
62 CGATCTGCTC
39811849 TGCATTGAAT
Statistics
Matches: 66, Mismatches: 4, Indels: 5
0.88 0.05 0.07
Matches are distributed among these distances:
86 25 0.38
87 1 0.02
88 12 0.18
89 28 0.42
ACGTcount: A:0.27, C:0.24, G:0.19, T:0.30
Consensus pattern (86 bp):
ATGCCAAATCATCTTGGACCTGCTTCAGTGAAAACACCTAAAGGCAGATCTGCTATGTCTTCGAT
CTGCTCCTTGTAAACACAAGA
Found at i:39811991 original size:131 final size:131
Alignment explanation
Indices: 39811775--39812109 Score: 424
Period size: 131 Copynumber: 2.5 Consensus size: 131
39811765 AAACACAAGA
* *
39811775 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTAAAGGTCAGATCTGCTATGTCTT
* ** ** ** ****
39811839 CGATCTGCTCTGCATTGAATATGGAGATGGTAAATATATTTCTTTGATTTGTTCTCTAACAATAC
63 CGATCTGCTCTCCATCAAATATGGAGATGCCAAATATATTTCTTCAATCCACTCTCTAACAATAC
39811904 AGAG
128 AGAG
*
39811908 ATTG-CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTTG
1 A-TGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCG
* * * *
39811972 ATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCACTCTCTGACAATACAG
65 ATCTGCTCTCCATCAAATATGGAGATGCCAAATATATTTCTTCAATCCACTCTCTAACAATACAG
39812037 AG
130 AG
* *
39812039 ATGCCAAATCATCTTGGCTCTGCTTCA-TGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCGA
*
39812103 TTTGCTC
66 TCTGCTC
39812110 CTGGTAAACA
Statistics
Matches: 177, Mismatches: 22, Indels: 9
0.85 0.11 0.04
Matches are distributed among these distances:
130 45 0.25
131 107 0.60
132 1 0.01
133 22 0.12
134 2 0.01
ACGTcount: A:0.27, C:0.22, G:0.18, T:0.33
Consensus pattern (131 bp):
ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCTTCGA
TCTGCTCTCCATCAAATATGGAGATGCCAAATATATTTCTTCAATCCACTCTCTAACAATACAGA
G
Found at i:39812185 original size:88 final size:88
Alignment explanation
Indices: 39812037--39812279 Score: 404
Period size: 88 Copynumber: 2.8 Consensus size: 88
39812027 GACAATACAG
* * *
39812037 AGATGCCAAATCATCTTGGCTCTGCTTC-ATGT--AAACA-CCTGAAGGTCAGATCTGCTATGTC
1 AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCC-AAAGGTCAGATCTGCTATGTC
39812098 TTCGATTTGCTCCTGGTAAACACA
65 TTCGATTTGCTCCTGGTAAACACA
39812122 AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCT
1 AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCT
39812187 TCGATTTGCTCCTGGTAAACACA
66 TCGATTTGCTCCTGGTAAACACA
* *
39812210 AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTACTATATCT
1 AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCT
39812275 TCGAT
66 TCGAT
39812280 CTTCTCTCCG
Statistics
Matches: 149, Mismatches: 5, Indels: 5
0.94 0.03 0.03
Matches are distributed among these distances:
85 26 0.17
86 4 0.03
88 117 0.79
89 2 0.01
ACGTcount: A:0.29, C:0.23, G:0.17, T:0.31
Consensus pattern (88 bp):
AGATGCCAAATCATCTTTGATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCT
TCGATTTGCTCCTGGTAAACACA
Found at i:39812441 original size:86 final size:88
Alignment explanation
Indices: 39812344--39812504 Score: 247
Period size: 88 Copynumber: 1.9 Consensus size: 88
39812334 CAATACAGAG
* *
39812344 ATGCCAAATCATCTTAGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAAATCTGCTATGTCTT
1 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAAATCTGCTATGTCTT
*
39812406 CGATTTGCTCTTGTAAACACAAGA
65 CGATCTGCTCTTGTAAACACAAGA
* *
39812430 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
39812495 GATCTGCTCT
66 GATCTGCTCT
39812505 CCATTGAATA
Statistics
Matches: 67, Mismatches: 5, Indels: 4
0.88 0.07 0.05
Matches are distributed among these distances:
86 25 0.37
87 1 0.01
88 39 0.58
89 2 0.03
ACGTcount: A:0.29, C:0.23, G:0.16, T:0.32
Consensus pattern (88 bp):
ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
GATCTGCTCTTGTAAACACAAGA
Found at i:39813172 original size:89 final size:86
Alignment explanation
Indices: 39812984--39813147 Score: 213
Period size: 89 Copynumber: 1.9 Consensus size: 86
39812974 TGACAATACA
* * *
39812984 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
1 GAGATGCCAAATCATCTTGGATCTACTTCAGTGAAAACACCTAAAGGTCAGATCTGCTACGTCTT
* * *
39813049 CGATTTGCTCCTTGTAAACAC
66 CGATCTACTCCTCGTAAACAC
* *
39813070 AAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTACG
1 GAG-ATGCCAAATCATCTTGGATCTACTTC-A-GTGAAAACA-CCTAAAGGTCAGATCTGCTACG
39813134 TCTTCGATCTACTC
62 TCTTCGATCTACTC
39813148 TCCGTCGAAT
Statistics
Matches: 67, Mismatches: 7, Indels: 5
0.85 0.09 0.06
Matches are distributed among these distances:
86 2 0.03
87 25 0.37
88 1 0.01
89 37 0.55
90 2 0.03
ACGTcount: A:0.28, C:0.24, G:0.18, T:0.30
Consensus pattern (86 bp):
GAGATGCCAAATCATCTTGGATCTACTTCAGTGAAAACACCTAAAGGTCAGATCTGCTACGTCTT
CGATCTACTCCTCGTAAACAC
Found at i:39813404 original size:44 final size:43
Alignment explanation
Indices: 39813346--39813428 Score: 103
Period size: 43 Copynumber: 1.9 Consensus size: 43
39813336 ATCTGCTATG
* * * **
39813346 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCCGCTCTCCGAC-AATACAGAGATGCCAAATCTGTT
*
39813390 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACAGAGATGCCAAATC
39813429 ATCTTGGATC
Statistics
Matches: 33, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
43 17 0.52
44 16 0.48
ACGTcount: A:0.27, C:0.28, G:0.16, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACAGAGATGCCAAATCTGTT
Found at i:39814028 original size:87 final size:85
Alignment explanation
Indices: 39813842--39814033 Score: 230
Period size: 87 Copynumber: 2.2 Consensus size: 85
39813832 GCTCTCTGAC
* * *
39813842 AATACAGAGATGCCAAATCATCTTGGTCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTAT
1 AATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTAT
*
39813907 GTCTTCGATTTGCTCCTTGT
66 GTCTTCGATTTGCTCCTCGT
* *
39813927 AA-ACACAAGAATGCCAAATCATCTTGATCTGCTTGATGTGAAAACATCC-AAAGGTCAGATCTG
1 AATACA-GAG-ATGCCAAATCATCTTGATCTGCTTCA-GTGAAAACA-CCTAAAGGTCAGATCTG
39813990 CTATGTCTTCGATCTCT-CTCCGTCG-
62 CTATGTCTTCGAT-T-TGCTCC-TCGT
*
39814015 AATATAGAGATGCCAAATC
1 AATACAGAGATGCCAAATC
39814034 TATTTCTTTG
Statistics
Matches: 91, Mismatches: 8, Indels: 14
0.81 0.07 0.12
Matches are distributed among these distances:
84 3 0.03
85 4 0.04
86 24 0.26
87 44 0.48
88 11 0.12
89 5 0.05
ACGTcount: A:0.29, C:0.23, G:0.18, T:0.30
Consensus pattern (85 bp):
AATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTAT
GTCTTCGATTTGCTCCTCGT
Found at i:39814264 original size:44 final size:42
Alignment explanation
Indices: 39814210--39814291 Score: 110
Period size: 44 Copynumber: 1.9 Consensus size: 42
39814200 ATCTGCTATG
* * *
39814210 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCTGCTCTCCGAC-AATA-CGAGATGCCAAATCTGTT
*
39814254 TCTTCAATCTGCTCTCTGACAATACGAGATGCCAAATC
1 TCTTCAATCTGCTCTCCGACAATACGAGATGCCAAATC
39814292 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
42 13 0.38
43 4 0.12
44 17 0.50
ACGTcount: A:0.26, C:0.27, G:0.16, T:0.32
Consensus pattern (42 bp):
TCTTCAATCTGCTCTCCGACAATACGAGATGCCAAATCTGTT
Found at i:39815068 original size:88 final size:87
Alignment explanation
Indices: 39814920--39815079 Score: 252
Period size: 88 Copynumber: 1.8 Consensus size: 87
39814910 CAATACAGAG
* *
39814920 ATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCGA
*
39814985 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
39815007 ATGCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGAAAACA-CCTAAAGGTCAGATCTGCTATGTCTT
39815070 CGATCTGCTC
63 CGATCTGCTC
39815080 TCCGTCGAAT
Statistics
Matches: 67, Mismatches: 3, Indels: 5
0.89 0.04 0.07
Matches are distributed among these distances:
86 10 0.15
87 16 0.24
88 39 0.58
89 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (87 bp):
ATGCCAAATCATCTTGGATCTGCTTCAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39815669 original size:87 final size:89
Alignment explanation
Indices: 39815570--39815730 Score: 256
Period size: 89 Copynumber: 1.8 Consensus size: 89
39815560 CAATACAGAG
* * *
39815570 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
*
39815632 CGATTTGCTCCTTGTAAACACAAGA
65 CGATCTGCTCCTTGTAAACACAAGA
39815657 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39815722 GATCTGCTC
66 GATCTGCTC
39815731 TCCGTCAATA
Statistics
Matches: 67, Mismatches: 4, Indels: 4
0.89 0.05 0.05
Matches are distributed among these distances:
87 25 0.37
88 1 0.01
89 39 0.58
90 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.19, T:0.30
Consensus pattern (89 bp):
ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCCTTGTAAACACAAGA
Found at i:39815773 original size:42 final size:43
Alignment explanation
Indices: 39815717--39815797 Score: 110
Period size: 42 Copynumber: 1.9 Consensus size: 43
39815707 ATCTGCTATG
* * **
39815717 TCTTCGATCTGCTCTCCGTCAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCTGCTCTCCGACAATACAGAGATGCCAAATCTGTT
*
39815760 TCTTCAATC-GCTCTCTGACAATACAGAGATGCCAAATC
1 TCTTCAATCTGCTCTCCGACAATACAGAGATGCCAAATC
39815798 ATCTTGATCT
Statistics
Matches: 33, Mismatches: 5, Indels: 1
0.85 0.13 0.03
Matches are distributed among these distances:
42 25 0.76
43 8 0.24
ACGTcount: A:0.26, C:0.27, G:0.16, T:0.31
Consensus pattern (43 bp):
TCTTCAATCTGCTCTCCGACAATACAGAGATGCCAAATCTGTT
Found at i:39815938 original size:89 final size:85
Alignment explanation
Indices: 39815788--39815946 Score: 239
Period size: 89 Copynumber: 1.8 Consensus size: 85
39815778 CAATACAGAG
* * *
39815788 ATGCCAAATCATCTTGATCTGCTTCAGTGTAAACACCTGAAGGTCAATCTGCTATGTCTTCGATT
1 ATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCTAAAGGTCAATCTGCTATGTCTTCGATC
39815853 TGCTCCTTGTAAACACAAGA
66 TGCTCCTTGTAAACACAAGA
39815873 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTT-GATCTGCTTC-A-GTGAAAACA-CCTAAAGGTCA-ATCTGCTATGTCTT
39815937 CGATCTGCTC
61 CGATCTGCTC
39815947 TCCATGAATA
Statistics
Matches: 66, Mismatches: 3, Indels: 6
0.88 0.04 0.08
Matches are distributed among these distances:
85 15 0.23
86 10 0.15
87 1 0.02
88 15 0.23
89 25 0.38
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (85 bp):
ATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCTAAAGGTCAATCTGCTATGTCTTCGATC
TGCTCCTTGTAAACACAAGA
Found at i:39816358 original size:84 final size:82
Alignment explanation
Indices: 39816193--39816366 Score: 212
Period size: 84 Copynumber: 2.1 Consensus size: 82
39816183 CAAATCTGTT
* * *
39816193 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCATTCAGGTAAACACTA
1 TCTTCGATTTGCTCTCTGACAACACAGAGATGCCAAATCATCTTGGATCATTCAGGTAAACACAA
39816258 AGGTCAGATCTACTATG
66 AGGTCAGATCTACTATG
* *
39816275 TCTTCGATTTGCTCT-TGTA-AACACAGA-ATGCCAAATCAT-TTGGATCTGCTTCATGTGAAAC
1 TCTTCGATTTGCTCTCTG-ACAACACAGAGATGCCAAATCATCTTGGATC--ATTCAGGT-AAAC
*
39816336 ATCCAAAGGTCAGATCTGCTATG
62 A--CAAAGGTCAGATCTACTATG
39816359 TCTTCGAT
1 TCTTCGAT
39816367 CTCTCTCCTC
Statistics
Matches: 80, Mismatches: 6, Indels: 10
0.83 0.06 0.10
Matches are distributed among these distances:
79 7 0.09
80 12 0.15
81 15 0.19
82 20 0.25
84 26 0.32
ACGTcount: A:0.29, C:0.21, G:0.17, T:0.33
Consensus pattern (82 bp):
TCTTCGATTTGCTCTCTGACAACACAGAGATGCCAAATCATCTTGGATCATTCAGGTAAACACAA
AGGTCAGATCTACTATG
Found at i:39816705 original size:124 final size:126
Alignment explanation
Indices: 39816485--39816722 Score: 396
Period size: 124 Copynumber: 1.9 Consensus size: 126
39816475 CAGATCTGCT
*
39816485 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACGCTTCGATGTGAAA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACGCTTCGATGTGAAA
*
39816550 ACATCCAAAGGTCAGATCTGCTAGTCTTCGATCT-CTCT-CGTCGAATAAGATGCAATCTC
66 ACATCCAAAGGTCAGATCTGCTAGTCTTCGATCTGCTCTCCGTCAAATAAGATGCAATCTC
39816609 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-C-GCTTCGATGTGA
39816674 AAACAT-CAAAGGT-AGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATA
64 AAACATCCAAAGGTCAGATCTGCTA-GTCTTCGATCTGCTCTCCGTCAAATA
39816723 TGGAGATGCC
Statistics
Matches: 107, Mismatches: 2, Indels: 8
0.91 0.02 0.07
Matches are distributed among these distances:
123 2 0.02
124 67 0.63
125 12 0.11
126 26 0.24
ACGTcount: A:0.29, C:0.23, G:0.17, T:0.31
Consensus pattern (126 bp):
ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACGCTTCGATGTGAAA
ACATCCAAAGGTCAGATCTGCTAGTCTTCGATCTGCTCTCCGTCAAATAAGATGCAATCTC
Found at i:39816782 original size:129 final size:127
Alignment explanation
Indices: 39816499--39816839 Score: 379
Period size: 124 Copynumber: 2.7 Consensus size: 127
39816489 CTTCGATTTG
39816499 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-C-GCTTCGATGTGAAAACATCCAAAGGT
1 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT-CAAAGGT
* * **
39816562 CAGATCTGCTA-GTCTTCGATCT-CTCTCGTCGAATAAGATGCAATCTCATGTCTTCGATTTA
65 CAGATCTGCTATGTCTTCGATCTGCTCTCGTCAAATAAGATGCAATCTCATGTCTTCAATCCA
39816623 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCAAAGGT-
1 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCAAAGGTC
* *
39816687 AGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCT-GTTTCTT-AAT
66 AGATCTGCTATGTCTTCGATCTGCTCT-CGTCAAATA---AGATG-C-AATCTCATGTCTTCAAT
*
39816749 CCG
125 CCA
* * *
39816752 CT-CTCTG-ACAATAC-AGAGATGCCAAATCATCTTGG-TCTGCTTC-A-GTGTAAACA-CTGAA
1 CTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC-AAA
*
39816810 GGTCAGATCTGCTATGTCTTCGATTTGCTC
62 GGTCAGATCTGCTATGTCTTCGATCTGCTC
39816840 CTTGTAAACA
Statistics
Matches: 190, Mismatches: 11, Indels: 28
0.83 0.05 0.12
Matches are distributed among these distances:
123 2 0.01
124 54 0.28
125 13 0.07
126 39 0.21
127 8 0.04
128 31 0.16
129 32 0.17
130 6 0.03
131 5 0.03
ACGTcount: A:0.28, C:0.23, G:0.18, T:0.31
Consensus pattern (127 bp):
CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCAAAGGTC
AGATCTGCTATGTCTTCGATCTGCTCTCGTCAAATAAGATGCAATCTCATGTCTTCAATCCA
Found at i:39816947 original size:85 final size:83
Alignment explanation
Indices: 39816767--39816949 Score: 215
Period size: 86 Copynumber: 2.2 Consensus size: 83
39816757 TGACAATACA
* * **
39816767 GAGATGCCAAATCATCTTGGTCTGCTTCAGTGTAAACACTGAAGGTCAGATCTGCTATGTCTTCG
1 GAGATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCAAAGGTCAGATCTGCTATGTCTTCG
**
39816832 ATTTGCTCCTTGTAAACAC
66 ATTACCTCC-TGTAAACAC
* *
39816851 AAGAATGCCAAATCATCTTGATCTGCTTGATGTGAAAACACCAAAGGTCAGATCTGCTATGTCTT
1 GAG-ATGCCAAATCATCTTGATCTGCTTCA-GTGAAAACACCAAAGGTCAGATCTGCTATGTCTT
* * *
39816916 CGATCTACCTCC-GTCGAATAT
64 CGAT-TACCTCCTGT-AAACAC
39816937 GAGATGCCAAATC
1 GAGATGCCAAATC
39816950 TGTTTCTTTG
Statistics
Matches: 83, Mismatches: 12, Indels: 7
0.81 0.12 0.07
Matches are distributed among these distances:
84 2 0.02
85 36 0.43
86 40 0.48
87 5 0.06
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (83 bp):
GAGATGCCAAATCATCTTGATCTGCTTCAGTGAAAACACCAAAGGTCAGATCTGCTATGTCTTCG
ATTACCTCCTGTAAACAC
Found at i:39817057 original size:213 final size:220
Alignment explanation
Indices: 39816609--39826669 Score: 4930
Period size: 220 Copynumber: 46.0 Consensus size: 220
39816599 ATGCAATCTC
*
39816609 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39816674 AAACAT-CAAAGGT-AGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* ** *
39816736 TCTGTTTC-TTAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGG-TCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39816799 TAAACA-CTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
39816823 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTT-GATCTGCTT-GATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39816886 AAACA-CCAAAGGTCAGATCTGCTATGTCTTCGATCTAC-CTCCGTCGAATAT-GAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
*
39816948 TCTGTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-AATCATCTTGGATCTACTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817011 TAAACACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
39817036 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817101 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATG-CAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* *
39817164 TCT-TTTC-TTCA--T-CT-TCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817223 TAAACACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
39817248 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817312 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* *
39817377 TCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAAATCATCTT-GAT-TACTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817439 TAAACACCTGAA-GTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
39817463 ATGTCTTC-ATTT-CTCCTTGTAAACACAAGAAT--CAAATCATCTTGGATCTG-TTC-ATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817522 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
*
39817586 TCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817650 TAAACA-CTGAAGGTCAGATCT-CT
196 TAAACACCTGAAGGTCAGATCTGCT
39817673 ATGTCTTCGATTT-CTCCTTGTAAACAC-AGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817735 AAACAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
39817798 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817863 TAAACACCTGAA-GTCCAGATCTGCT
196 TAAACACCTGAAGGT-CAGATCTGCT
39817888 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTG-TTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* *
39817951 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAAATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * * *
39818016 TCTTTTTC-TTCAATCG-TCTCTGACAATACAGAGATGCCAAATCATCTT-AATC-GCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39818077 TAAACACCTGAAGGTCAAATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
*
39818102 ATGTCTTCGATTTGCTCCTTGT-AACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39818166 AAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCTCCAT-GAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
*
39818229 TCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39818294 TAAA-ACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
*
39818318 ATGTCTTC-ATTTGC-CCTTGTAAACACAAGAATGCCAAAT-A-C-T-CATCTGCTTCGA--TG-
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39818374 AAACATCCAAAGGT-AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * *
39818438 TCTATTTC-TTCATTT-TTCTCTGACAATACAGATATGCCAAATCATCTTGGAT-TGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* *
39818500 TAAACA--TTAAGGTCAGATCTACT
196 TAAACACCTGAAGGTCAGATCTGCT
* *
39818523 ATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* *
39818587 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
*
39818652 TCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39818717 TAAA-ACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * * ** * *
39818741 ATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAATTA-CCTCAATCTGCTTCGTTATG-
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39818804 AAACATCCAAAGGT-AGATCTGCTATG-CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * *
39818867 TCTATTTC-TTCATTT-TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGTTTCAATG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39818930 TAAACACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * ** * ** * *
39818955 ATGTCTTCGATCTGTTCTCC--GTCAATA-TGGAGATGCCAAATCATTTATTCATTTGTTCTCAG
1 ATGTCTTCGAT-T-TGCTCCTTGTAAACACAAGA-ATGCCAAATCATCT-TGGATCTGCT-TC-G
* ** * * ** **
39819017 ATATGTAAATCATCTTAGTTCTGCTTCAGTGT-AAATACCTAAAGGTCAAATCTGCTATATCTTC
60 ATGTG-AAA--A-C--A--TC--C-AAAG-GTCAGAT--CT---GCT-ATGTCT--TCGATC-T-
* ** * * * * *
39819081 GACTTGCTCC-TTGTAA-ACTCAAGAATG-CAAATC---ATCTTGGATCTGCTTTGATGTGA-AA
103 G-C-T-CTCCGTCG-AATA-TGGAG-ATGCCAAATCTGTTTCTTTGATTTG--TT-CTCTGACAA
* * * * * * * * * * *
39819139 -ACATCCAAAGGTCATATCTGCTATGTCTTCGATCTACTTTCCGTCG--AATA--TGGAGATGCC
159 TACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGC-TTCAGT-GTAAACACCT-GA-AGGTC
*
39819199 A-A-AT-CT
212 AGATCTGCT
* * * *
39819205 ATTTCTTCGATTTG-TTC-TCT-AACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTGCTCCTTGTAAAC-ACA-AGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * * * ** *
39819265 TGTAAAC-GCCTGAAGGTCAGATCTGCTATGTCTTCTATTTACTC-CTTGT-AAACA-CAAGAAC
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * * * * * * *
39819326 GCCAAATC---ATCTTGGATCTGCTTCGATGTGAAACATCCA-A-AGGTCAGATCTGCTATGTCT
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACA-ATACAGAGATGCCA-A-AT-C-A--TCT
* * * * * * *
39819386 TCGATCTGCTCTCCGT-TGAATA--TGGAGATGCCAAATCTG-T
180 TGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* * *
39819426 -T-TCTTCGATTTG-TTCTCTG-ACAATAC-AGACATGCCAAATCATATTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * ** *
39819484 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAAC
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * * * * * * *
39819545 GCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGCC
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-AT--C
* * * * * * *
39819605 TTCGATCTCCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T
179 TTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * *
39819646 -T-TCTTCGATTTGTTCTTTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTTCTTC-A-GT
1 ATGTCTTCGATTTGCTCCTTGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGT
* * * * * * * * * **
39819705 GTAAACAAT-TAAAGGTCAGATCTACTATTTCTTCGATTTACTC-CTTGT-AAACA-CAAGAATG
64 GAAAAC-ATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATG
* * ** * * * * * *
39819766 CCAAATC---ATCTTGGACCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCT
126 CCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCT
* * * * * * *
39819826 TCGATTTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T
180 TGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * *
39819866 -T-TCTTTGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * * **
39819924 TGTAAACA-CCTGAAGGCCAGATCTGGTATGTCTTCGATTTGCTC-CTTGT-AAACA-AAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * ** * * * * *
39819985 GGCAAATC---ATCTTGGACCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAAATCTGCTATGTC
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCAAA--T-C-A--TC
* * * * * * * *
39820045 TTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATGTGC-
179 TTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* * * * * *
39820086 -T-TCTTCAATCTGCT-CTCTG-ACAATAC-GGAGATGCCAAATCATCTTAGATCCGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * * **
39820144 TGTAAACA-CCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCTCTTCGT-AAACA-CAAGGATG
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGA-GATG
* * ** * * * * * *
39820206 CCAAATC---ATCTTAT-ATCTGCTTCGATGTA-AAAACATCCAAAGGTCAGATCTGCTATGTCT
126 CCAAATCTGTTTCTT-TGATTTG-TTCTCTG-ACAATACA--GAGATGCCA-A-AT-C-A--TCT
* * * * * * *
39820266 TCGATTTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T
180 TGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * *
39820306 -T-TCTTTG-TTTG-TTCTCTG-ACAATAC-AGATATGCCAAATCATCTTGGATCTGCTT-TA-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * **
39820363 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* ** * * * * * * *** *
39820424 GCCAAATCATCTTGAATCTGCTTTG--ATGTGAAAACATCCAAAGGTTAGAT-CTGGTAT-GTCT
125 GCCAAATC-TGTT-TCTTTGATTTGTTCTCTG-ACA-AT--ACA-G--AGATGC-CAAATCATCT
* * * * * *
39820485 TTGATCTACTCTCCGTCG--AATA--TG-GGGCTGACAAATCTG--
180 TGGATCTGCT-TCAGT-GTAAACACCTGAAGG-T--CAGATCTGCT
* * * * ** ***
39820524 GT-TCTTCGATTT-ATTCTCTG-ACAATAC-AGAGATGTTAAATCATCTTGGATCAAATTCAGA-
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTC-GAT
* * * * ***
39820584 GT-AAACAAAT--AAAGGTCAGATCTGCTATGTCTTCAATTTGC-C-CC-TTGTAA-ACACAAGA
62 GTGAAA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AATA-TGGAG-
*** * * * * ** * * * *** **
39820642 ATGCCAAAT-TACCTCAATCTGCTTCGTTATGCAAAC-ATCCAAAGGTTAGATCTGCTATGCCTT
123 ATGCCAAATCTGTTTC--TTTGATTTGTTCT-CTGACAATACAGAGATGCCAAAT-C-AT--CTT
** * * * * *
39820705 CAATCTGCTCTCCGTCG--AATA--TGGAGATGCCA-A-AT-CT
181 GGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * *
39820742 ATTTCTTC-ATTT--TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTT-TA-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * **
39820800 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* ** * * * * * * *** * *
39820861 GCCAAATCATCTTGAATCTGCTTTG--ATGTGAAAACATCCAAAGGTTAGAT-CTGGTAT-GTCC
125 GCCAAATC-TGTT-TCTTTGATTTGTTCTCTG-ACA-AT--ACA-G--AGATGC-CAAATCATCT
* * * *
39820922 TCGATCTGCTCTCCGTCG--AATA--TG--GGCTGACAAATCTG--
180 TGGATCTGCT-TCAGT-GTAAACACCTGAAGG-T--CAGATCTGCT
* * * ** * ***
39820960 GT-TCTTCGATTTG-TTCTCTG-ACAATAC-AGAGATGTTAAATCATCTTGTATCAAATTCAGA-
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTC-GAT
* * * * * * *
39821020 GT-AAACAAAT--AAAGGTCAGATCTGCTATGTCTTCGATTTGCT-TCTTGT-AAACACAGTA-A
62 GTGAAA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATA-TGGAGA
* * * * ** * *
39821079 TGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTC-CA-AAGGT-CAGATCTG-C-TAT-G
124 TGCCAAATC-TGTT---TCT--TT-GATTTG--TTC-TCTGACAA--TACAGAGATGCCAAATCA
* * * * * * *
39821138 TCTTCGATCTTCTCTCCA-T-CAAATA--TGGAGATGCCAAATCTG-T
177 TCTTGGATCTGCT-T-CAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* * * **
39821181 -T-TCATCGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCCACTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * **
39821239 TGTAAACA-CTTAAAGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATC-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * * * * * * *
39821300 GCCAAA--T-TATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTACGTC
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TC
* * * *
39821360 TTCGATCTAG-TCTCCGTCG-AAA-A--TGAAGATGCCAAATCTG-T
179 TTGGATCT-GCT-TCAGT-GTAAACACCTGAAG--GTCAGATCTGCT
* *
39821401 -T-TCTTCGATTTGTTCAC-TG-ACAATACAGAGACA--CCAAATCATCTTGGATCTGCTTC-A-
1 ATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGA-ATGCCAAATCATCTTGGATCTGCTTCGAT
* * * * * * * * * **
39821458 GTGTAAACA-CCTGAAGGTCAAATCTACTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAA
62 GTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-A
* * * * * * * * *
39821519 TGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGT
124 TGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--T
* * * * * * *
39821579 CTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T
178 CTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* *** * * *
39821621 -T-TCTT-AACCCGCT-CTCTG-ACAATAC-AGAGATGCCATATCATCTTGGATCTACTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * * * **
39821678 TGTAAACA-CCTGAAGGCCATATCTACTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * ** * * * * * * *** ** *
39821739 GCCAAATC---ATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGCTTGTCTTC
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTG-ACA-ATACAGA-GAT-G-CCAAATCATCTTG
* * * * * *
39821801 TATCTGCTCTCCGT-CAAATA--TGGAGATGTCAAATCTG--
182 GATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* * * * * *
39821838 GT-TCCTC-A-ATGC-CCTCTCTGACAATAC-AGAGATGCCAAATCATCTTGGATCCGCTTCAGA
1 ATGTCTTCGATTTGCTCCT-TGT-A-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTC-GA
* * * * * * * **
39821898 -GT--AAGCA-CCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGA
61 TGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-
** * * * * * * * * * *
39821956 ATGGTAAATC---ATCTTGGATCTGCATCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
123 ATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--
* * * * * *
39822016 TCTTCGATCTGCTCTCCGTCG--AATA--TAGAGATGCCAAATCTG--
177 TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * *
39822058 AT-TCTTCGATTTG-TTCTATGATAATACA-GAGAA-GCCAAATCATCTTGGATGTACTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TG-TAA-ACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATG
* * ** * * * * * * **
39822117 TGTAAACA-CCTGAACTTCAGATCTGCTATGTCTTCAATTTACTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * * * * * * * *
39822178 TCTAAATC---ATCTTAGATCTGTTTCAATCTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTC
125 GCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TC
* * * * * * *
39822238 TTCGATCTCCTCTCCGTCG--AATA--TGGAGATACCAAATCTG-T
179 TTGGATCTGCT-TCAGT-GTAAACACCTGAAGGT--CAGATCTGCT
** *
39822279 -T-TCTTCGATTTG-TTTTTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-GT
1 ATGTCTTCGATTTGCTCCTTGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATGT
* * ** * * * * * * * **
39822337 GTAAACAACTGAAGGTCAGATCTACTATTTCTTCGATTTACTC-CTTGT-AAACA-CAAGAATGC
64 GAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGC
* * ** * * * * * * *
39822399 CAAATC---ATCTTGGACCTGCTTCGATGTGA-AA-ACATCAAAGGTCAGATCTGCTATGTCTTT
127 CAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA-GAGATGCCA-A-AT-C-A--TCTTG
* * * * *
39822459 GATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T
182 GATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * *
39822497 -T-TCTTTGATTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATATGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * ** * * * * **
39822555 TGTAAACAGCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCCAAAGGT-CAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-AT
* * * * * * * * * *
39822616 GCCAAATC---ATCTTGGACCTGGTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTC
125 GCCAAATCTGTTTCTTTGA-TTTGTTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TC
* * * * * * *
39822676 TTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T
179 TTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* ** * ** *
39822717 -T-TCTTCAATCCGCT-CTCT-TACAATAC-AGAGATGCCAAATCATCTTAAATCCGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * **
39822775 TGTAAACA-CCTGAAGGTCAAATCTGCTATGTCTTTGATTTG--CTCC-TTGTAATCA-CAAGAA
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AAT-ATGGAG-A
* * * * * * * * *
39822835 TGCCAAATC---ATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT-CTACTAT-GT
124 TGCCAAATCTGTTTCTTTGATTTG-TTC--TCTG-ACA-AT--ACA-G--AGATGCCA-AATCAT
* * * * * *
39822895 CTTCGATCTGCTCTCCA-T-TGAATA--TGGAGATGCCAAATCTG-T
178 CTTGGATCTGCT-T-CAGTGTAAACACCT-GA-AGGTCAGATCTGCT
* * *
39822937 -T-TCTTCGTTTTG-TTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * ***
39822995 TGTAAAAC--CCTGAAGGTCAGATCTGCTATGTCTTCAATTTGC-C-CC-TTGTAA-ACACAAGA
63 TG-AAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AATA-TGGAG-
*** * * * * ** * * * *** **
39823054 ATGCCAAAT-TACCTCAATCTGCTTCGTTATGCAAAC-ATCCAAAGGTTAGATCTGCTATGCCTT
123 ATGCCAAATCTGTTTC--TTTGATTTGTTCT-CTGACAATACAGAGATGCCAAAT-C-AT--CTT
* * * * * *
39823117 CGATCTGCTCTCCGTCG--AATA--TGGAGATGCCA-A-AT-CT
181 GGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * * *
39823154 ATTTCTTC-ATTT-TTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGTTTC-A-G
1 ATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * *
39823213 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCATCGAATATGGAGATGC
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGC
* * ** * ** * *
39823277 CAAATCTATTTATTCAATTTG---T-T--C--T-CAGATATGTAAAATCATCTTAGTTCTGCTTC
127 CAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC
* * *
39823333 AGTGTAAACACCTAAAGGTCAAATATGCT
192 AGTGTAAACACCTGAAGGTCAGATCTGCT
* * * *
39823362 ATATCTTCGACTTGCTCCTTGTAAACTCCAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39823426 AAACATCCAAAGGTCATATCTGCTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCAAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * *
39823491 TCTATTTCTTCGATTTGTTCTCTAACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* * *
39823556 TAAACGCCTGAAGGTCATATCTGAT
196 TAAACACCTGAAGGTCAGATCTGCT
* *
39823581 ATGTCTTCGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39823646 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTTGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * *
39823711 TCTGTTTCTTCGATTTGCTCTCTGACAATACAGACATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
** *
39823776 TAAACAATTGAAGGTCAGATCTACT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * * *
39823801 ATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTAGACCTGCTTCGATGTTA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* *
39823866 AAACATCCAAAGGTCAGATTTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* ** *
39823931 TCTGTTTCATCAATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
** * *
39823996 TAAACAATTGAAGGTCAAATCTACT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * * *
39824021 ATTTCTTCGATTTACTCCTTGTAAACACAAGAATGTCAAATCATCTTGGACCTGCTTCGATGTGT
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39824086 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
39824151 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* *
39824216 TAAACACCTGAAGGCCAGATCTGGT
196 TAAACACCTGAAGGTCAGATCTGCT
* * *
39824241 ATGTCTTCGATTTGCTCCTTGTAAACAAAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39824306 AATCATCCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* ** ** * * * * *
39824371 TCTGCTTCTTCAATCCGCTCTCTGACAATACGGAGATTCCAAATCATCTTAGATCCGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39824436 TAAACACCTGAAGGTCAAATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * ** * *
39824461 ATGTCTTCGTTTTGCT-CTTCGTAAACACAAGGATGCCAAATCATCTTATATCTGCTTTGATGTA
1 ATGTCTTCGATTTGCTCCTT-GTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTG
* * * * * *
39824525 AAAACATCCAAAGGTCCGATCTACTATGTCTTCGATCTACTCTCCATTGAATATGAAGATGCCAA
65 AAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAA
* * *
39824590 ATCTGTTTCTTTGGTTTGTTCTCTGACAATACAGATATGCCAAATCATCTTGGATCTGCTTTAGT
130 ATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGT
39824655 GTAAACACCTGAAGGTCAGATCTGCT
195 GTAAACACCTGAAGGTCAGATCTGCT
* *
39824681 ATGTCTTCAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * * *
39824746 AAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTGCTCTCCGTCGAATATGG-GCTGACAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * *** *
39824810 TCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGATCAAATTCAGAG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
** *
39824875 TAAACAAATAAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * *
39824900 ATGTCTTCGATTTGCTTCTTGTAAACAC-AGTAATACCAAATCATTTTGGATTTGCTTCGATGTG
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTG
* * * * * * *
39824964 AAATCGTCCAAAGGTCAGATCTACTATGTCTCCGATCTTCTCTCCATCAAATATGGAGATGCCAA
65 AAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAA
* * *
39825029 ATCTGTTTGTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGT
130 ATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGT
39825094 GTAAACACCT-AATGGTCAGATCTGCT
195 GTAAACACCTGAA-GGTCAGATCTGCT
*
39825120 ATGTCTTCGATTTGCTCCTTGTAAATACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39825185 AAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * ** * *
39825250 TCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATCCGCTTCAGAG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* *
39825315 TAAGCACCTGAAGGTCAGATCGGCT
196 TAAACACCTGAAGGTCAGATCTGCT
** * *
39825340 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCTTGGATATGCATCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39825405 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * * * * *
39825470 TCTGTTTCTTCGATTTGTTCTATGATAATACAGAGAAGCCAAATCATCTTAGATGTACTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* *
39825535 TAAACACCTGAACGTCAGATATGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * * * * *
39825560 ATGTCTTCAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* *
39825625 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATACCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * *
39825690 TCTGTTTCTTCGATTTGTTTTTTGACAATACAGAGATGCCAGATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
* *
39825755 TAAACAACTGAAGGTCAGATCTACT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * *
39825780 ATTTCTTCGATTTACTCATTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39825845 AAACAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
*
39825909 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATATGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39825974 TAAACACTTGAA-GTCCAGATCTGCT
196 TAAACACCTGAAGGT-CAGATCTGCT
* * *
39825999 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGGTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39826064 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
** ** * ** *
39826129 TCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAAATCCGCTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39826194 TAAACACCTGAAGGTCAAATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * *
39826219 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTTGATCTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39826284 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATATAGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * *
39826349 TCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCGTCTTGGATCTGTTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39826414 TAAAAACCTGAAGGTCAGATCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
* * * * * *
39826439 ATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGTTATGC
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * * *
39826504 AAACATCCAAAGGTTAGATCTGCTATGCCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * * * **
39826569 TCTATTTCTTCGATTTTTTCCCTGACAATACAGAGATGCCAAATCATCTTGGATCTATTTCAGTG
131 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
*
39826634 TAAACACCTGAAGGTCAGGTCTGCT
196 TAAACACCTGAAGGTCAGATCTGCT
39826659 ATGTCTTCGAT
1 ATGTCTTCGAT
39826670 CTGTTTTCCG
Statistics
Matches: 8450, Mismatches: 942, Indels: 904
0.82 0.09 0.09
Matches are distributed among these distances:
203 1 0.00
204 4 0.00
205 39 0.00
206 21 0.00
207 68 0.01
208 79 0.01
209 126 0.01
210 165 0.02
211 175 0.02
212 282 0.03
213 313 0.04
214 307 0.04
215 199 0.02
216 229 0.03
217 249 0.03
218 409 0.05
219 1502 0.18
220 3951 0.47
221 68 0.01
222 37 0.00
223 22 0.00
224 16 0.00
225 6 0.00
226 10 0.00
227 6 0.00
228 4 0.00
229 4 0.00
230 2 0.00
231 5 0.00
232 2 0.00
233 4 0.00
234 7 0.00
236 3 0.00
237 1 0.00
238 2 0.00
240 4 0.00
241 2 0.00
242 4 0.00
243 5 0.00
244 6 0.00
245 20 0.00
246 8 0.00
247 13 0.00
248 6 0.00
249 8 0.00
250 29 0.00
251 3 0.00
252 3 0.00
253 16 0.00
254 4 0.00
255 1 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
TAAACACCTGAAGGTCAGATCTGCT
Found at i:39817088 original size:87 final size:88
Alignment explanation
Indices: 39816982--39817141 Score: 245
Period size: 89 Copynumber: 1.8 Consensus size: 88
39816972 CAATACAGAG
* *
39816982 ATGCCAATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAATCATCTTGGATCTACTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTC
*
39817044 GATTTGCTCCTTGTAAACACAAGA
65 GATCTGCTCCTTGTAAACACAAGA
*
39817068 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCC-AATCATCTTGGATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39817133 GATCTGCTC
65 GATCTGCTC
39817142 TCCGTCAATA
Statistics
Matches: 66, Mismatches: 4, Indels: 5
0.88 0.05 0.07
Matches are distributed among these distances:
86 5 0.08
87 19 0.29
88 1 0.02
89 39 0.59
90 2 0.03
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (88 bp):
ATGCCAATCATCTTGGATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCG
ATCTGCTCCTTGTAAACACAAGA
Found at i:39817717 original size:83 final size:86
Alignment explanation
Indices: 39817592--39817768 Score: 240
Period size: 84 Copynumber: 2.1 Consensus size: 86
39817582 CAAATCTGTT
* * * *
39817592 TCTTCGATTTGTTCTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAAC
1 TCTTCGATTTCTCCTTGACAACACAGAGATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAAC
*
39817655 A-CTGAAGGTCAGATCT-CTATG
65 ATC-AAAGGTCAGATCTGCTATG
39817676 TCTTCGATTTCTCCTTGTA-AACACAGA-ATGCCAAATCATCTTGGACTGCTTCGATGTGAAAAC
1 TCTTCGATTTCTCCTTG-ACAACACAGAGATGCCAAATCATCTTGGACTGCTTCGATGTGAAAAC
39817739 ATCAAAGGTCAGATCTGCTATG
65 ATCAAAGGTCAGATCTGCTATG
39817761 TCTTCGAT
1 TCTTCGAT
39817769 CTGCTTCCGT
Statistics
Matches: 83, Mismatches: 5, Indels: 9
0.86 0.05 0.09
Matches are distributed among these distances:
82 7 0.08
83 19 0.23
84 42 0.51
85 15 0.18
ACGTcount: A:0.28, C:0.21, G:0.18, T:0.33
Consensus pattern (86 bp):
TCTTCGATTTCTCCTTGACAACACAGAGATGCCAAATCATCTTGGACTGCTTCGATGTGAAAACA
TCAAAGGTCAGATCTGCTATG
Found at i:39817930 original size:87 final size:87
Alignment explanation
Indices: 39817833--39817991 Score: 227
Period size: 87 Copynumber: 1.8 Consensus size: 87
39817823 CAATACAGAG
* *
39817833 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGA-CTG-TTCGATGTGAAAACATCC-AAAGGT-CAGATCTGCTATGTCT
*
39817894 TCGATTTGCTCCTTGTAAACACAAGA
62 TCGATCTGCTCCTTGTAAACACAAGA
39817920 ATGCCAAATCATCTTGGACTGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTGGACTGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGA
39817985 TCTGCTC
66 TCTGCTC
39817992 TCCGTCAAAT
Statistics
Matches: 65, Mismatches: 3, Indels: 8
0.86 0.04 0.11
Matches are distributed among these distances:
85 3 0.05
86 4 0.06
87 54 0.83
88 4 0.06
ACGTcount: A:0.27, C:0.24, G:0.18, T:0.31
Consensus pattern (87 bp):
ATGCCAAATCATCTTGGACTGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39818048 original size:429 final size:437
Alignment explanation
Indices: 39816609--39818965 Score: 3816
Period size: 429 Copynumber: 5.5 Consensus size: 437
39816599 ATGCAATCTC
*
39816609 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39816674 AAACAT-CAAAGGTAGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAAT
66 AAACATCCAAAGGTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
*
39816737 CTGTTTCTT-AATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGG-TCTGCTTCAGTGT
131 CTATTTCTTCAAT-CG-TCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGT
39816800 AAACA-CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAAT
194 AAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAAT
*
39816864 CATCTT-GATCTGCTT-GATGTGAAAACA-CCAAAGGTCAGATCTGCTATGTCTTCGATCTAC-C
259 CATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTC
*
39816925 TCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-
324 TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCA
*
39816987 AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
389 AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
39817036 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817101 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATG-CAAA
66 AAACATCCAAAGGT-AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
39817164 TCT-TTTCTTC-ATC-T-TCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
130 TCTATTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
39817225 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATC
195 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
39817289 ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCT
260 ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCT
39817354 CCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAA
325 CCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAA
*
39817418 ATCATCTT-GAT-TACTTCAGTGTAAACACCTGAA-GTCAGATCTGCT
390 ATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
39817463 ATGTCTTC-ATTT-CTCCTTGTAAACACAAGAAT--CAAATCATCTTGGATCTG-TTC-ATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39817522 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT-CTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGT-AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* * *
39817586 TCTGTTTCTTCGATTTGT-TCTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
130 TCTATTTCTTC-AATCGTCTC-TGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
39817650 TAAACA-CTGAAGGTCAGATCT-CTATGTCTTCGATTT-CTCCTTGTAAACAC-AGAATGCCAAA
193 TAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAA
39817711 TCATCTTGGA-CTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCT
258 TCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT
*
39817774 -TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCC
323 CTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCC
39817838 AAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCT
388 AAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCT
39817888 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTG-TTCGATGTGA
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* *
39817951 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAAATGCCAAA
66 AAACATCCAAAGGT-AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
* *
39818016 TCTTTTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTT-AATC-GCTTCAGTGTA
130 TCTATTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTA
*
39818079 AACACCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGT-AACACAAGAATGCCAAATC
195 AACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATC
*
39818143 ATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTCT
260 ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCT
*
39818207 CCAT-GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAA
325 CCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAA
39818271 ATCATCTTGGATCTGCTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCT
390 ATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
*
39818318 ATGTCTTC-ATTTGC-CCTTGTAAACACAAGAATGCCAAAT-A-C-T-CATCTGCTTCGA--TG-
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39818374 AAACATCCAAAGGTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
66 AAACATCCAAAGGTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
* ** *
39818439 CTATTTCTTCATTTTTCTCTGACAATACAGATATGCCAAATCATCTTGGAT-TGCTTCAGTGTAA
131 CTATTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
* * * *
39818503 ACA--TTAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCA
196 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
39818566 TCTTGGA-CTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC
261 TCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC
* *
39818630 CATTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAA
326 CGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAA
39818695 TCATCTTGGATCTGCTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCT
391 TCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
* * * * ** * *
39818741 ATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAATTA-CCTCAATCTGCTTCGTTATG-
1 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39818804 AAACATCCAAAGGTAGATCTGCTATG-CTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
66 AAACATCCAAAGGTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
* ** * *
39818868 CTATTTCTTCATTTTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGTTTCAATGTAA
131 CTATTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
39818933 ACACCTGAAGGTCAGATCTGCTATGTCTTCGAT
196 ACACCTGAAGGTCAGATCTGCTATGTCTTCGAT
39818966 CTGTTCTCCG
Statistics
Matches: 1834, Mismatches: 40, Indels: 107
0.93 0.02 0.05
Matches are distributed among these distances:
420 9 0.00
421 163 0.09
422 217 0.12
423 232 0.13
424 90 0.05
425 145 0.08
426 47 0.03
427 216 0.12
428 107 0.06
429 274 0.15
430 165 0.09
431 131 0.07
432 38 0.02
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (437 bp):
ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
AAACATCCAAAGGTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAAT
CTATTTCTTCAATCGTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAA
ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCA
TCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC
CGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAA
TCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCT
Found at i:39818085 original size:638 final size:654
Alignment explanation
Indices: 39816609--39826669 Score: 4574
Period size: 659 Copynumber: 15.4 Consensus size: 654
39816599 ATGCAATCTC
39816609 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
39816674 AAACAT-CAAAGGT-AGATCTG-TATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
*
39816736 TCTGTTTCTT--AATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGTCTGCTTCAGTG
131 TCTGTTTCTTCGAAT-CGCTCTCTGACAATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTG
39816799 TAAACA-CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAA
195 TAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAAA
*
39816863 TCATCTTGATCTGCTT-GATGTGAAAACA-CCAAAGGTCAGATCTGCTATGTCTTCGATCTAC-C
259 TCATCTTGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTC
*
39816925 TCCGTCGAATAT-GAGATGCCAAATCTGTTTCTTTGATTTGTTCT-TGACAATACAGAGATGCC-
324 TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCA
*
39816987 AATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
389 AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
39817052 CCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA
454 CCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA
*
39817117 GATCTGCTATGTCTTCGATCTGCTCTCCGTC-AATATGGAGATG-CAAATCTTTTCTTCA--TCT
519 GATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTTTTCTTCATTTTT
39817178 -TCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGA
584 CTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGA
39817242 TCTGCT
649 TCTGCT
*
39817248 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATG-CAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39817312 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * * *
39817377 TCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAAATCATCTTGAT-TACTTCAGTGT
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTGT
39817440 AAACACCTGAA-GTCAGATCTGCTATGTCTTC-ATTT-CTCCTTGTAAACACAAGAAT-CAAATC
196 AAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATCCAAATC
39817501 ATCTTGGATCTG-TTC-ATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT-CTCT
261 ATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCT
39817563 CCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCT-TGACAATACAGAGATGCCAA
325 CCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAA
39817627 ATCATCTTGGATCTGCTTCAGTGTAAACA-CTGAAGGTCAGATCT-CTATGTCTTCGATTT-CTC
390 ATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTC
39817689 CTTGTAAACAC-AGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGAAAACAT-CAAAGGTCAG
455 CTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAG
*
39817751 ATCTGCTATGTCTTCGATCTGCT-TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTG
520 ATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTC-TTCATTT-
39817815 TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCC
582 TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-C
39817879 AGATCTGCT
646 AGATCTGCT
*
39817888 ATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTG-TTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39817951 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAAATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* *
39818016 TCTTTTTCTTC-AATCG-TCTCTGACAATACAGAGATGCCAAATCATCTTAATC-GCTTCAGTGT
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTGT
*
39818078 AAACACCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGT-AACACAAGAATGCCAAAT
196 AAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAAAT
39818142 CATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-ATCTGCTATGTCTTCGATCTGCTC
260 CATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTC
*
39818206 TCCAT-GAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCA
324 TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCA
39818270 AATCATCTTGGATCTGCTTCAGTGTAAA-ACCTGAAGGTCAGATCTGCTATGTCTTC-ATTTGC-
389 AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCT
*
39818332 CCTTGTAAACACAAGAATGCCAAAT-A-C-T-CATCTGCTTCGA--TG-AAACATCCAAAGGT-A
454 CCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCA
39818389 GATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCATTTT
519 GATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTCATTTT
* *
39818454 TCTCTGACAATACAGATATGCCAAATCATCTTGGAT-TGCTTCAGTGTAAACA--TTAAGGTCAG
583 TCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAG
*
39818516 ATCTACT
648 ATCTGCT
*
39818523 ATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGA-CTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* **
39818587 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * *
39818652 TCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTG
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGTG
* *
39818717 TAAA-ACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAA
195 TAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAAA
* * ** * *
39818781 TTACCTCAATCTGCTTCGTTATG-AAACATCCAAAGGT-AGATCTGCTATG-CTTCGATCTGCTC
259 TCATCTTGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTC
*
39818843 TCCGTCGAATATGGAGATGCCAAATCTATTTCTTC-ATTT-TTCTCTGACAATACAGAGATGCCA
324 TCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCA
* * *
39818906 AATCATCTTGGATCTGTTTCAATGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATCTGTT
389 AATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGAT-T-TG
* *
39818971 CTCCGTCAATATGGAGATGCCAAATCATTTATTCATTTGTTCTCAGATATG-TAAATCATCTTAG
452 CT-C--C--T-T---G-T---AAA-C----A--CA---------AGA-ATGCCAAATCATCTTGG
* * * * * *
39819035 TTCTGCTTC-A-GTGTAAATA-CCTAAAGGTCAAATCTGCTATATCTTCGA-CT--TGCTCC-TT
487 ATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTC
** * ** * * * * *
39819093 GTAA-ACTCAAGAATG-CAAATCATCTTGGATCTGC--TTTGATGTGA-AA-ACATCCAAAGGTC
550 G-AATA-TGGAG-ATGCCAAATC-T-TT---TCTTCATTTTTCTCTGACAATACA--GAGATGCC
* * * * * * * *
39819152 ATATCTGCTATGTCTTCGATCTACTTTCCGTCG--AATA--TGGAGATGCCA-A-AT-CT
605 A-A-AT-C-A--TCTTGGATCTGC-TTCAGT-GTAAACACCT-GA-AGGTCAGATCTGCT
* * * * *
39819205 ATTTCTTCGATTT-GTTC-TCT-AACAATACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTACTCCTTGTAAAC-ACA-AGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * * ** *
39819265 TGTAAAC-GCCTGAAGGTCAGATCTGCTATGTCTTCTATTTACTC-CTTGT-AAACA-CAAGAAC
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATATGGAG-AT
* * * * * * * *
39819326 GCCAAATC---ATCTT-GGATCTGCTTCGATGTGAAACATCCA-A-AGGTCAGATCTGCTATGTC
125 GCCAAATCTGTTTCTTCGAATC-GC-TC--TCTGACA-ATACAGAGATGCCA-A-AT-C-A--TC
* * * * * * *
39819385 TTCGATCTGCTCTCCGT-TGAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTG-TTCTC
179 TT-GATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-
* * * *
39819443 TG-ACAATAC-AGACATGCCAAATCATATTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCA
239 TGTA-AACACAAGA-AT-CCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTCA
* * * * * ** * * *
39819503 GATCTGCTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAACGCCAAATC---ATCTTGGAT
299 GATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATCTGTTTCTTCGAT
* * * * * * * * * *
39819562 CTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGCCTTCGATCTCCTCTCCGTCG-
362 TTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-AT--CTTGGATCTGCT-TCAGT-GT
* * * * * * *
39819624 -AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTTTG-ACAATAC-AGAGATGCC
414 AAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTA-AACACAAGA-ATGCC
* * * * * *
39819681 AAATCATCTTGGATCTTCTTC-A-GTGTAAACAAT-TAAAGGTCAGATCTACTATTTCTTCGATT
475 AAATCATCTTGGATCTGCTTCGATGTGAAAAC-ATCCAAAGGTCAGATCTGCTATGTCTTCGATC
* * * * ** * *** * ** *
39819743 TACTC-CTTGT-AAACA-CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGA-AA-ACATC
539 TGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-TTTTCTTCATTTTTC--TCTGACAATACA--
* * * * * * * * * * * *
39819803 CAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT
597 GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCT
39819864 G-T
652 GCT
* * * *
39819866 -T-TCTTTGATTT-GTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTTC-A-G
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * * * **
39819924 TGTAAACA-CCTGAAGGCCAGATCTGGTATGTCTTCGATTTGCTC-CTTGT-AAACA-AAAGAAT
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATATGGAG-AT
* * * * * * * * *
39819985 GGCAAATC---ATCTT-GGACCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAAATCTGCTATGT
125 GCCAAATCTGTTTCTTCGAATC-GC-TC--TCTGACAATACA--GAGATGCCAAA--T-C-A--T
* * * * * * * * *
39820044 CTTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATGTGC--T-TCTTCAATCTGCT-CT
178 CTT-GATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT
* * * * *
39820102 CTG-ACAATAC-GGAGATGCCAAATCATCTTAGATCCGCTTC-A-GTGTAAACA-CCTGAAGGTC
239 -TGTA-AACACAAGA-AT-CCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTC
* * * * * * ** * **
39820162 AAATCTGCTATGTCTTCGTTTTGCTCTTCGT-AAACA-CAAGGATGCCAAATC---ATCTTATAT
298 AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGA-GATGCCAAATCTGTTTCTTCGAT
* ** * * * * * * * * *
39820222 CTGCTTCGATGTA-AAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTCCGTCG--
362 TTG-TTCTCTG-ACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTA
* * * * * * *
39820284 AATA--TGGAGATGCCAAATCTG-T-T-TCTTTG-TTTG-TTCTCTG-ACAATAC-AGATATGCC
415 AACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATGCC
* * * * *
39820340 AAATCATCTTGGATCTGCTT-TA-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCAATT
475 AAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATC
* * * ** * ** * *
39820402 TGCTC-CTTGT-AAACA-CAAGAATGCCAAATCATCTTGAATCTGC--TTTGATGTGAAAACATC
539 TGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-T-TT---TCTTCATTTTTCTCTG-ACA-AT-
* *** * * * * * * *
39820462 CAAAGGTTAGAT-CTGGTAT-GTCTTTGATCTACTCTCCGTCG--AATA--TG-GGGCTGACAAA
594 -ACA-G--AGATGC-CAAATCATCTTGGATCTGCT-TCAGT-GTAAACACCTGAAGG-T--CAGA
39820520 TCTG--
649 TCTGCT
* * * ** ***
39820524 GT-TCTTCGATTTA-TTCTCTG-ACAATAC-AGAGATGTTAAATCATCTTGGATCAAATTCAGA-
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTC-GAT
* * * * **
39820584 GT-AAACAAAT--AAAGGTCAGATCTGCTATGTCTTCAATTTGC-C-CCTTGT-AAACA-CAAGA
62 GTGAAA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCC--GTCAAATATGGAG-
* * ** * * * * *
39820642 ATGCCAAA----TTACCTC-AATCTGCT-TC-G-TTATGCAAACAT-CCAAAGGTTAGATC-TGC
123 ATGCCAAATCTGTTTCTTCGAATC-GCTCTCTGACAATACAGAGATGCCAAA---T-CATCTTGA
* * * *** * ** * * *
39820697 TATGCCTTCAATCTGCTCTCCGTCGAATATGGAGATGCCAAAT-CTATTTCTTC-ATTT--TTCT
183 TCTG-CTTCAGTGTAAACACC-T-GAAGGT-CAGAT--C---TGCTATGTCTTCGATTTGCTCCT
* * * *
39820758 CTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGCTT-TA-GTGTAAACA-CCTGAAGGTC
239 -TGTA-AACACAAGA-AT-CCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTC
* * * * * ** * ***
39820818 AGATCTGCTATGTCTTCAATTTGCTC-CTTGT-AAACA-CAAGAATGCCAAATCATCTTGAATCT
298 AGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-TGTTTCTTC-
* * * * * *** * * * *
39820880 GCTTTG--ATGTGAAAACATCCAAAGGTTAGAT-CTGGTAT-GTCCTCGATCTGCTCTCCGTCG-
359 GATTTGTTCTCTG-ACA-AT--ACA-G--AGATGC-CAAATCATCTTGGATCTGCT-TCAGT-GT
* * * * *
39820940 -AATA--TG--GGCTGACAAATCTG--GT-TCTTCGATTTG-TTCTCTG-ACAATAC-AGAGATG
414 AAACACCTGAAGG-T--CAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATG
** * *** *
39820994 TTAAATCATCTTGTATCAAATTCAGA-GT-AAACAAAT--AAAGGTCAGATCTGCTATGTCTTCG
473 CCAAATCATCTTGGATCTGCTTC-GATGTGAAA-ACATCCAAAGGTCAGATCTGCTATGTCTTCG
* * * * * * ** ** *
39821055 ATTTGCT-TCTTGT-AAACACAGTA-ATGCCAAATCATTTTGGATC-TGCTTCGATGTGA-AAT-
536 ATCTGCTCTC-CGTCGAATA-TGGAGATGCCAAATC-TTTT-CTTCATTTTTC--TCTGACAATA
* * * * * * * * * *
39821114 C-GTCCAAAGGTCAGATCTGCTATGTCTTCGATCTTCTCTCCA-T-CAAATA--TGGAGATGCCA
595 CAG---AGATGCCA-A-AT-C-A--TCTTGGATCTGCT-T-CAGTGTAAACACCT-GA-AGGTCA
*
39821174 AATCTG-T
647 GATCTGCT
* * * * **
39821181 -T-TCATCGATTT-GTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCCACTTC-A-G
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * * **
39821239 TGTAAACA-CTTAAAGGTCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATC-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATATGGAG-AT
* * * * * * * *
39821300 GCCAAA--T-TATCTT-GGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTACGT
125 GCCAAATCTGTTTCTTCGAATC-GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--T
* * * *
39821359 CTTCGATCTAG-TCTCCGTCG-AAA-A--TGAAGATGCCAAATCTG-T-T-TCTTCGATTTGTTC
178 CTT-GATCT-GCT-TCAGT-GTAAACACCTGAAG--GTCAGATCTGCTATGTCTTCGATTTGCTC
* * *
39821416 AC-TG-ACAATACAGAGACA-CCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGG
237 -CTTGTA-AACACA-AGA-ATCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGG
* * * * * * * ** * *
39821475 TCAAATCTACTATGTCTTCGATTTACTC-CTTGT-AAACA-CAAGAATGCCAAATC---ATCTTG
296 TCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATCTGTTTCTTC
* * * * * * * * *
39821534 GATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT
359 GATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT
* * * * * * *** *
39821597 -CAAATA--TGGAGATGCCAAATCTG-T-T-TCTT-AACCCGCT-CTCTG-ACAATAC-AGAGAT
412 GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-AT
* * * * * * *
39821652 GCCATATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTGAAGGCCATATCTACTATGTCTTCG
472 GCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCG
* * * * ** * *** * ** * *
39821714 ATTTGCTC-CTTGT-AAACA-CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT
536 ATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-TTTTCTTCATTTTTC--TCTG-ACA-AT
* * * * *** ** ** * * * * *
39821776 CCAAAGGTTAGATCTGCTTGTCTTCTATCTGCTCTCCGT-CAAATA--TGGAGATGTCAAATCTG
594 ACAGA-GAT-G-CCAAATCATCTTGGATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTG
39821838 --
653 CT
* * * *** * *
39821838 GT-TCCTCAATGCCCT-CTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCCGCTTCAGA-
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTC-GAT
* * * * * * **
39821898 GT--AAGCA-CCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAA
62 GTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATATGGAG-A
** * * * * * * * *
39821957 TGGTAAATC---ATCTT-GGATCTGCATCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATG
124 TGCCAAATCTGTTTCTTCGAATC-GC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--
* * * * * *
39822016 TCTTCGATCTGCTCTCCGTCG--AATA--TAGAGATGCCAAATCTG--AT-TCTTCGATTTG-TT
177 TCTT-GATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTC
* * * * * * **
39822073 CTATGATAATACA-GAGAAGCCAAATCATCTTGGATGTACTTC-A-GTGTAAACA-CCTGAACTT
237 CT-TG-TAA-ACACAAGAATCCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGT
* * * * * * ** * * * *
39822134 CAGATCTGCTATGTCTTCAATTTACTC-CTTGT-AAACA-CAAGAATTCTAAATC---ATCTTAG
297 CAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCGAATATGGAG-ATGCCAAATCTGTTTCTTCG
* * * * * * * * *
39822193 ATCTGTTTCAATCTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTC
360 ATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-
* * * * ** *
39822256 G--AATA--TGGAGATACCAAATCTG-T-T-TCTTCGATTTG-TTTTTG-ACAATAC-AGAGATG
412 GTAAACACCTGAAGGT--CAGATCTGCTATGTCTTCGATTTGCTCCTTGTA-AACACAAGA-ATG
* * ** * *
39822311 CCAAATCATCTTGGATCTGCTTC-A-GTGTAAACAACTGAAGGTCAGATCTACTATTTCTTCGAT
473 CCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGAT
* * * * * ** * *** * ** *
39822374 TTACTC-CTTGT-AAACA-CAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGA-AA-ACAT
538 CTGCTCTC-CGTCGAATATGGAG-ATGCCAAATC-TTTTCTTCATTTTTC--TCTGACAATACA-
* * * * * * * * * * *
39822434 CAAAGGTCAGATCTGCTATGTCTTTGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT
597 GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAGATCT
39822495 G-T
652 GCT
* * * * *
39822497 -T-TCTTTGATTT-GTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATATGCTTC-A-G
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * ** * * * **
39822555 TGTAAACAGCTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTC-CTTGT-AAACA-CAAGAAT
63 TGAAAACATCCAAAGGT-CAGATCTGCTATGTCTTCGATCTGCTCTC-CGTCAAATATGGAG-AT
* * * * * * * * * * *
39822616 GCCAAATC---ATCTTGGACCTGGTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTC
125 GCCAAATCTGTTTCTTCGA-ATCGCTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TC
* * * * * * * **
39822676 TTCGATCTGCTCTCCGT-CAAATA--TGGAGATGCCAAATCTG-T-T-TCTTCAATCCGCT-CTC
179 TT-GATCTGCT-TCAGTGTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-
* * * * *
39822734 T-TACAATAC-AGAGATGCCAAATCATCTTAAATCCGCTTC-A-GTGTAAACA-CCTGAAGGTCA
239 TGTA-AACACAAGA-AT-CCAAATCATCTT-GATCTGCTTCGATGTGAAAACATCC-AAAGGTCA
* * * * ** * *
39822794 AATCTGCTATGTCTTTGATTTG--CTCC-TTGTAATCA-CAAGAATGCCAAATC---ATCTTAGA
299 GATCTGCTATGTCTTCGATCTGCTCTCCGTCG-AAT-ATGGAG-ATGCCAAATCTGTTTCTTCGA
* * * * * * * *
39822852 TCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT-CTACTAT-GTCTTCGATCTGCTCTCCA-T-
361 TTTG-TTC--TCTG-ACA-AT--ACA-G--AGATGCCA-AATCATCTTGGATCTGCT-T-CAGTG
* * * * * * * *
39822913 TGAATA--TGGAGATGCCAAATCTG-T-T-TCTTCGTTTTG-TTCTCTG-ACAATAC-AGAGATG
413 TAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGTA-AACACAAGA-ATG
* *
39822970 CCAAATCATCTTGGATCTGCTTC-A-GTGTAAAAC--CCTGAAGGTCAGATCTGCTATGTCTTCA
473 CCAAATCATCTTGGATCTGCTTCGATGTG-AAAACATCC-AAAGGTCAGATCTGCTATGTCTTCG
* * *** * * * * *
39823031 ATTTGC-C-CC-TTGTAA-ACACAAGAATGCCAAA---TTACCTCAATCTGCTTCGTTATGCAAA
536 ATCTGCTCTCCGTCG-AATA-TGGAG-ATGCCAAATCTTTTCTTC-AT-T-TTTC--TCTG-ACA
* * * *** ** * * * * *
39823089 CATCCAAAGGTTAGATCTGCTATGCCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCA-
592 -ATACAGAGATGCCAAAT-C-AT--CTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGTCAG
*
39823149 A-AT-CT
648 ATCTGCT
* * * * *
39823154 ATTTCTTC-ATTT-TTTCTCTG-ACAATAC-AGAGATGCCAAATCATCTTGGATCTGTTTC-A-G
1 ATGTCTTCGATTTACTCCT-TGTA-AACACAAGA-ATGCCAAATCATCTTGGATCTGCTTCGATG
* * * * *
39823213 TGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCATCGAATATGGAGATGC
63 TGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGC
* * * * * ** *
39823277 CAAATCTATTTATTC-AAT---T-TGT-TC--T-CAGATATGTAAAATCATCTTAGTTCTGCTTC
127 CAAATCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTC
* * * * * * * *
39823333 AGTGTAAACACCTAAAGGTCAAATATGCTATATCTTCGACTTGCTCCTTGTAAACTCCAGAATGC
191 AGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATCC
*
39823398 AAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCATATCTGCTATGTCTTCGATCT
256 AAATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCT
* * * *
39823463 ACTCTCCGTCGAATATGGAGATGCAAAATCTATTTCTTCGATTTGTTCTCTAACAATACAGAGAT
320 GCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGAT
* * *
39823528 GCCAAATCATCTTGGATCTGCTTCAGTGTAAACGCCTGAAGGTCATATCTGATATGTCTTCGATT
385 GCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATT
* *
39823593 TACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAG
450 TGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAG
*
39823658 GTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTTGAATATGGAGATGCCAAATCTGTTTCTTCG
515 GTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTC-
* * **
39823723 ATTTGCTCTCTGACAATACAGACATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAATTGAA
578 ATTT-TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA
*
39823788 GGTCAGATCTACT
642 GGTCAGATCTGCT
* * * *
39823801 ATTTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTAGACCTGCTTCGATGTTA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39823866 AAACATCCAAAGGTCAGATTTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * * *
39823931 TCTGTTTCATC-AATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGT
131 TCTGTTTCTTCGAA-TCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGT
** * * * * *
39823995 GTAAACAATTGAAGGTCAAATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGAATGTCAA
194 GTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAA
* * *
39824060 ATCATCTTGGACCTGCTTCGATGTGTAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATTTGC
258 ATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGC
*
39824125 TCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGC
322 TCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGC
* *
39824190 CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTTCGATTTG
387 CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * *
39824255 CTCCTTGTAAACAAAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAATCATCCAAAGGT
452 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGT
* * *
39824320 CAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGCTTCTTCAAT
517 CAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTC-AT
*** * * * *
39824385 CCGCTCTCTGACAATACGGAGATTCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGG
580 -TTTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGG
*
39824450 TCAAATCTGCT
644 TCAGATCTGCT
* * * ** * *
39824461 ATGTCTTCGTTTTGCT-CTTCGTAAACACAAGGATGCCAAATCATCTTATATCTGCTTTGATGTA
1 ATGTCTTCGATTTACTCCTT-GTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTG
* * * * ** *
39824525 AAAACATCCAAAGGTCCGATCTACTATGTCTTCGATCTACTCTCCATTGAATATGAAGATGCCAA
65 AAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAA
* ** * * * *
39824590 ATCTGTTTCTTTGGTTTGTTCTCTGACAATACAGATATGCCAAATCATCTTGGATCTGCTTTAGT
130 ATCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGT
*
39824655 GTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCTCCTTGTAAACACAAGAATGCCAA
194 GTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAA
* *
39824720 ATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTCGATCTGC
258 ATCATCTTG-ATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGC
* * * *
39824785 TCTCCGTCGAATATGG-GCTGACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACAGAGATGT
322 TCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGC
*** * ** *
39824849 CAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTTCGATTTG
387 CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * * * * *
39824914 CTTCTTGTAAACAC-AGTAATACCAAATCATTTTGGATTTGCTTCGATGTGAAATCGTCCAAAGG
452 CTCCTTGTAAACACAAG-AATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGG
* * * * * *
39824978 TCAGATCTACTATGTCTCCGATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTGTTCGA
516 TCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTC-A
*
39825043 TTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AAT
579 TTT-TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-
39825107 GGTCAGATCTGCT
642 GGTCAGATCTGCT
* *
39825120 ATGTCTTCGATTTGCTCCTTGTAAATACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * * *
39825185 AAACATCCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * * * ** * *
39825250 TCTGTTTCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATCCGCTTCAGAG
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGTG
* * **
39825315 TAAGCACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAA
195 TAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAAA
* *
39825380 TCATCTTGGATATGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT
259 TCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCT
* * *
39825445 CTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTATGATAATACAGAGAAGCC
323 CTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCC
* * * * * * *
39825510 AAATCATCTTAGATGTACTTCAGTGTAAACACCTGAACGTCAGATATGCTATGTCTTCAATTTAC
388 AAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGC
* * * * *
39825575 TCCTTGTAAACACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCCAAAGGTC
453 TCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTC
* *
39825640 AGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATACCAAATCTGTTTCTTCGATT
518 AGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTC-ATT
* * * *
39825705 TGTTTTTTGACAATACAGAGATGCCAGATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGT
581 T-TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT
*
39825770 CAGATCTACT
645 CAGATCTGCT
* * *
39825780 ATTTCTTCGATTTACTCATTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGA
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
*
39825845 AAACAT-CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * * * *
39825909 TCTGTTTCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATATGCTTCAGTG
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGTG
* *
39825974 TAAACACTTGAA-GTCCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGCAA
195 TAAACACCTGAAGGT-CAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAAT-CCAA
* *
39826038 ATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGC
258 ATCATCTT-GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGC
* * ** *
39826103 TCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACAGAGATGC
322 TCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGC
** * *
39826168 CAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGATTTG
387 CAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTG
* * *
39826233 CTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTTGATCTGAAAACATCCAAAGGT
452 CTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGT
* * *
39826298 CAGATCTGCTATGTCTTCGATCTGCTCTCCATTGAATATAGAGATGCCAAATCTGTTTCTTCGAT
517 CAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCT-TTTCTTC-AT
* * *
39826363 TTGTTCTCTGACAATACAGAGATGCCAAATCGTCTTGGATCTGTTTCAGTGTAAAAACCTGAAGG
580 TT-TTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGG
39826428 TCAGATCTGCT
644 TCAGATCTGCT
* * * * * * *
39826439 ATGTCTTCAATTTGCCCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGTTATGC
1 ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
* * *
39826504 AAACATCCAAAGGTTAGATCTGCTATGCCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAA
66 AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
* * *** * **
39826569 TCTATTTCTTCGATTTTTTCCCTGACAATACAGAGATGCCAAATCATCTTGGATCTATTTCAGTG
131 TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTT-GATCTGCTTCAGTG
*
39826634 TAAACACCTGAAGGTCAGGTCTGCTATGTCTTCGAT
195 TAAACACCTGAAGGTCAGATCTGCTATGTCTTCGAT
39826670 CTGTTTTCCG
Statistics
Matches: 7850, Mismatches: 1021, Indels: 1081
0.79 0.10 0.11
Matches are distributed among these distances:
632 6 0.00
633 45 0.01
634 27 0.00
635 88 0.01
636 175 0.02
637 137 0.02
638 295 0.04
639 272 0.03
640 238 0.03
641 111 0.01
642 41 0.01
643 100 0.01
644 155 0.02
645 32 0.00
646 67 0.01
647 51 0.01
648 119 0.02
649 40 0.01
650 95 0.01
651 25 0.00
652 23 0.00
653 15 0.00
654 26 0.00
655 34 0.00
656 370 0.05
657 62 0.01
658 1098 0.14
659 2085 0.27
660 1439 0.18
661 42 0.01
662 18 0.00
663 14 0.00
664 13 0.00
665 5 0.00
666 4 0.00
667 3 0.00
668 6 0.00
669 2 0.00
670 7 0.00
671 4 0.00
672 1 0.00
673 7 0.00
674 32 0.00
675 20 0.00
676 31 0.00
677 6 0.00
678 8 0.00
679 10 0.00
680 27 0.00
681 52 0.01
682 56 0.01
683 54 0.01
684 49 0.01
685 38 0.00
686 24 0.00
687 3 0.00
688 2 0.00
689 9 0.00
690 4 0.00
691 3 0.00
692 21 0.00
693 3 0.00
694 1 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (654 bp):
ATGTCTTCGATTTACTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGA
AAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAA
TCTGTTTCTTCGAATCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGATCTGCTTCAGTGT
AAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATCCAAATC
ATCTTGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC
CGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAA
TCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCC
TTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGA
TCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTTTTCTTCATTTTTCT
CTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATC
TGCT
Found at i:39818196 original size:87 final size:84
Alignment explanation
Indices: 39818049--39818205 Score: 228
Period size: 87 Copynumber: 1.8 Consensus size: 84
39818039 CAATACAGAG
* * *
39818049 ATGCCAAATCATCTTAATCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGATT
1 ATGCCAAATCATCTTAATCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGATC
39818114 TGCTCCTTGTAACACAAGA
66 TGCTCCTTGTAACACAAGA
39818133 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTC-AATCTGCTATGTCTT
1 ATGCCAAATCATCTTA-ATC-GCTTC-A-GTGAAAACA-CCTAAAGGTCAAATCTGCTATGTCTT
39818196 CGATCTGCTC
61 CGATCTGCTC
39818206 TCCATGAATA
Statistics
Matches: 65, Mismatches: 3, Indels: 7
0.87 0.04 0.09
Matches are distributed among these distances:
84 16 0.25
85 3 0.05
86 5 0.08
87 25 0.38
88 14 0.22
89 2 0.03
ACGTcount: A:0.29, C:0.24, G:0.16, T:0.31
Consensus pattern (84 bp):
ATGCCAAATCATCTTAATCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGATC
TGCTCCTTGTAACACAAGA
Found at i:39819687 original size:220 final size:220
Alignment explanation
Indices: 39818900--39823250 Score: 6277
Period size: 220 Copynumber: 19.9 Consensus size: 220
39818890 CAATACAGAG
* * *
39818900 ATGCCAAATCATCTTGGATCTGTTTCAATGT--AAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
* * *
39818962 CGATCTGTTCTCCGTC-AATATGGAGATGCCAAATC-ATTTATTC-ATTTG---T-T--C--T-C
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * * * * * *
39819015 AGATATG-TAAATCATCTTAGTTCTGCTTCAGTGTAAATACCTAAAGGTCAAATCTGCTATATCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* *
39819079 TCGACTTGCTCCTTGTAAACTCAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39819105 ATG-CAAATCATCTTGGATCTGCTTTGATGTGAAAACATCCAAAGGTCATATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39819169 GATCTACTTTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTAACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39819234 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACGCCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39819299 CTATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39819324 ACGCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39819388 GATCTGCTCTCCGTTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39819453 GACATGCCAAATCATATTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39819518 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39819543 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39819608 GATCTCCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* ** * * *
39819673 GAGATGCCAAATCATCTTGGATCTTCTTCAGTGTAAACAATTAAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39819738 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39819763 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39819828 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39819893 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39819958 CGATTTGCTCCTTGTAAACAAAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39819983 ATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * * *
39820048 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATGTGCTTCTTCAATCTGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39820113 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39820178 CGTTTTGCT-CTTCGTAAACACAAGG
196 CGATTTGCTCCTT-GTAAACACAAGA
** *
39820203 ATGCCAAATCATCTTATATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39820268 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTG-TTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39820332 GATATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39820397 CAATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39820422 ATGCCAAATCATCTTGAATCTGCTTTGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * *
39820487 GATCTACTCTCCGTCGAATATGGGGCTGACAAATCTGGTTCTTCGATTTATTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** *** * ** *
39820552 GAGATGTTAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39820617 CAATTTGCCCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * ** * * * * *
39820642 ATGCCAAATTA-CCTCAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39820706 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTC-ATTT-TTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39820769 GAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39820834 CAATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39820859 ATGCCAAATCATCTTGAATCTGCTTTGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCCTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39820924 GATCTGCTCTCCGTCGAATATGG-GCTGACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *** * ** *
39820988 GAGATGTTAAATCATCTTGTATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39821053 CGATTTGCTTCTTGTAAACAC-AGTA
196 CGATTTGCTCCTTGTAAACACAAG-A
* * *
39821078 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39821143 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCATCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39821208 GAGATGCCAAATCATCTTGGATCCACTTCAGTGTAAACACTTAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39821273 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39821298 ATGCCAAATTATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39821363 GATCTAG-TCTCCGTCGAAAATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATAC
66 GATCT-GCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
** * *
39821427 AGAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
*
39821492 TCGATTTACTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
39821518 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *** *
39821583 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTT-AACCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39821647 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39821712 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39821737 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGCT-TGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * * ****
39821801 TATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGGTTCCTCAATGCCCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39821866 GAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39821931 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** *
39821956 ATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39822021 GATCTGCTCTCCGTCGAATATAGAGATGCCAAATCTGATTCTTCGATTTGTTCTATGATAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * **
39822086 GAGAAGCCAAATCATCTTGGATGTACTTCAGTGTAAACACCTGAACTTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39822151 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39822176 ATTCTAAATCATCTTAGATCTGTTTCAATCTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39822241 GATCTCCTCTCCGTCGAATATGGAGATACCAAATCTGTTTCTTCGATTTGTT-TTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39822305 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39822370 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39822395 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39822459 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39822524 GAGATGCCAAATCATCTTGGATATGCTTCAGTGTAAACAGCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39822588 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39822614 ATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * *
39822679 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTTACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39822744 GAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39822809 TGATTTGCTCCTTGTAATCACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39822834 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39822899 GATCTGCTCTCCATTGAATATGGAGATGCCAAATCTGTTTCTTCGTTTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39822964 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA-ACCCTGAAGGTCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCT
* *
39823028 TCAATTTGCCCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * ** * * * * *
39823054 ATGCCAAATTA-CCTCAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39823118 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTC-ATTTTTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39823182 GAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39823247 CGAT
196 CGAT
39823251 CTGTTCTCCA
Statistics
Matches: 3717, Mismatches: 392, Indels: 61
0.89 0.09 0.01
Matches are distributed among these distances:
204 24 0.01
205 3 0.00
206 39 0.01
207 21 0.01
208 7 0.00
209 5 0.00
212 1 0.00
213 1 0.00
215 1 0.00
217 121 0.03
218 287 0.08
219 1368 0.37
220 1835 0.49
221 4 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39820012 original size:440 final size:440
Alignment explanation
Indices: 39818900--39832927 Score: 12162
Period size: 440 Copynumber: 32.0 Consensus size: 440
39818890 CAATACAGAG
* * *
39818900 ATGCCAAATCATCTTGGATCTGTTTCAATGT--AAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
* * *
39818962 CGATCTGTTCTCCGTC-AATATGGAGATGCCAAATC-ATTTATTC-ATTTG---T-T--C--T-C
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * * * * * *
39819015 AGATATG-TAAATCATCTTAGTTCTGCTTCAGTGTAAATACCTAAAGGTCAAATCTGCTATATCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* * *
39819079 TCGACTTGCTCCTTGTAAACTCAAGAATG-CAAATCATCTTGGATCTGCTTTGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
* * * *
39819143 CCAAAGGTCATATCTGCTATGTCTTCGATCTACTTTCCGTCGAATATGGAGATGCCAAATCTATT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* *
39819208 TCTTCGATTTGTTCTCTAACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACG
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* *
39819273 CCTGAAGGTCAGATCTGCTATGTCTTCTATTTACTCCTTGTAAACACAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
*
39819324 ACGCCAAATCATCTTGGATCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39819388 GATCTGCTCTCCGTTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39819453 GACATGCCAAATCATATTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39819518 CGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* *
39819583 CAAAGGTCAGATCTGCTATGCCTTCGATCTCCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39819648 CTTCGATTTGTTCTTTGACAATACAGAGATGCCAAATCATCTTGGATCTTCTTCAGTGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * * * *
39819713 TTAAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
*
39819763 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39819828 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39819893 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39819958 CGATTTGCTCCTTGTAAACAAAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39820023 CAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATGTGCTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * * * *
39820088 CTTCAATCTGCTCTCTGACAATACGGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39820153 CTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCT-CTTCGTAAACACAAGG
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTT-GTAAACACAAGA
** *
39820203 ATGCCAAATCATCTTATATCTGCTTCGATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39820268 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTG-TTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39820332 GATATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39820397 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTTGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * * * *
39820462 CAAAGGTTAGATCTGGTATGTCTTTGATCTACTCTCCGTCGAATATGGGGCTGACAAATCTGGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* ** *** * *
39820527 CTTCGATTTATTCTCTGACAATACAGAGATGTTAAATCATCTTGGATCAAATTCAGAGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * * *
39820592 ATAAAGGTCAGATCTGCTATGTCTTCAATTTGCCCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * ** * * * * *
39820642 ATGCCAAATTA-CCTCAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39820706 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTC-ATTT-TTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39820769 GAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39820834 CAATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTTGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * *
39820899 CAAAGGTTAGATCTGGTATGTCCTCGATCTGCTCTCCGTCGAATATGG-GCTGACAAATCTGGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
** * *** * *
39820963 CTTCGATTTGTTCTCTGACAATACAGAGATGTTAAATCATCTTGTATCAAATTCAGAGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39821028 ATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAG-A
* * *
39821078 ATGCCAAATCATTTTGGATCTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39821143 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCATCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39821208 GAGATGCCAAATCATCTTGGATCCACTTCAGTGTAAACACTTAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39821273 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATTATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39821338 CAAAGGTCAGATCTGCTACGTCTTCGATCTAG-TCTCCGTCGAAAATGAAGATGCCAAATCTGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCT-GCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* **
39821402 TCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* * *
39821467 CCTGAAGGTCAAATCTACTATGTCTTCGATTTACTCCTTGTAAACACAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
39821518 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *** *
39821583 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTT-AACCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39821647 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39821712 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * *
39821777 CAAAGGTTAGATCTGCT-TGTCTTCTATCTGCTCTCCGTCAAATATGGAGATGTCAAATCTGGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * **** * * *
39821841 CCTCAATGCCCTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39821906 CTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
** *
39821956 ATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39822021 GATCTGCTCTCCGTCGAATATAGAGATGCCAAATCTGATTCTTCGATTTGTTCTATGATAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * **
39822086 GAGAAGCCAAATCATCTTGGATGTACTTCAGTGTAAACACCTGAACTTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * * * * *
39822151 CAATTTACTCCTTGTAAACACAAGAATTCTAAATCATCTTAGATCTGTTTCAATCTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* *
39822216 CAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATACCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* *
39822281 CTTCGATTTGTT-TTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39822345 CTGAAGGTCAGATCTACTATTTCTTCGATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39822395 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39822459 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39822524 GAGATGCCAAATCATCTTGGATATGCTTCAGTGTAAACAGCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
* *
39822588 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39822653 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* ** * * ** *
39822718 TCTTCAATCCGCTCTCTTACAATACAGAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* * *
39822783 CCTGAAGGTCAAATCTGCTATGTCTTTGATTTGCTCCTTGTAATCACAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39822834 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39822899 GATCTGCTCTCCATTGAATATGGAGATGCCAAATCTGTTTCTTCGTTTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39822964 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAA-ACCCTGAAGGTCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCT
* * * * ** * * *
39823028 TCAATTTGCCCCTTGTAAACACAAGAATGCCAAATTA-CCTCAATCTGCTTCGTTATGCAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
* * *
39823092 CCAAAGGTTAGATCTGCTATGCCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTATT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* *
39823157 TCTTC-ATTTTTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* * * **
39823221 CCTGAAGGTCAGATCTGCTATGTCTTCGATCTGTTCTCCATCG--AATA-TGGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGAT-T-TGCTCC-TTGTAAACACAAGA
* ** * * * * ** *
39823272 GATGCCAAATCTATTTATTCAATTTGTTCTCAGATATGTAAA-AT-C--ATCTTAG-T-T-C--T
1 -ATGCCAAATC-A--TCTTGGATCTGCT-TC-GATGTGAAAACATCCAAAGGTCAGATCTGCTAT
* *** * * * *
39823328 G-CTTC-AGTGTAAACACC-T--AA-A--G-G-T--CAAATATGCTATATCTTCGACTTGCTC-C
60 GTCTTCGA-TCTGCTCTCCGTCGAATATGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC
* * *
39823380 TTGTA-AACTCCAGA-ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTC
121 -TG-ACAA-TACAGAGATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTC
* * * * * * ** * *
39823441 ATATCTGCTATGTCTTCGATCTACT-CTCCGTCGAATA-TGGAGATGCAAAATCTATTTCTTCGA
180 AGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC-A--TCTTGGA
* * * * * * * * *
39823504 TTTG-TTC--TCT-AACA-ATACAGAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCAGT-G
239 TCTGCTTCGATGTGAAAACATCCA-A-AGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCG
* * * * ** * *
39823556 TAA-ACGCCTGA-AGGTCATATCTGATATGTCTTCGATTTACTC-CTTGTA-AACACA-AGAACG
302 -AATATG---GAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-ATG
* *
39823616 CCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTCGA
357 CCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTCGA
* * **
39823680 TCTGCTCTCCGTTG--AATA-TGGA
419 TTTG--CTCC-TTGTAAACACAAGA
* * * * * * * * *
39823702 GATGCCAAATCTGTTTCTTCGATTTGC-TC--TCTGACAATACA--GACATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * * * **
39823757 -TCTTGGATCTGCT-TCAGT-GTAAACAATTGA-AGGTCAGATCTACTATTTCTTCGATTTACTC
60 GTCTTCGATCTGCTCTCCGTCG--AA-TATGGAGATGCCA-A-AT-CTGTTTCTTCGATTTGTTC
* * * *
39823818 -CTTGTA-AACACA-AGAATGCCAAATCATCTTAGACCTGCTTC-GATGTTAAAACATCC-AAAG
119 TC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG-TG-T-AAACA-CCTGAAG
* * * * * * ** * **
39823878 GTCAGATTTGCTATGTCTTCGATCTCCT-CTCCGTCGAATA-TGGAGATGCCAAATC-TGTTTCA
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATCATCTTGGA
* * * * * * * *
39823940 TCAATTTG-TTC--TTTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCTGCT-TCA
239 TC----TGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCC
* * * * * ** *
39823993 GT-GTAAACAATTGA-AGGTCAAATCTACTATTTCTTCGATTTACTC-CTTGTA-AACACA-AGA
298 GTCG--AA-TATGGAGATGCCAAA--T-CTGTTTCTTCGATTTGTTCTC-TG-ACAATACAGAG-
* * *
39824053 ATGTCAAATCATCTTGGACCTGCTTCGATGTGTAAACATCC-AAAGGTCAGATCTGCTATGTCTT
354 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
* * * **
39824117 CGATTTGCT-CTCCGTCGAATA-TGGA
416 CGATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * * *
39824142 GATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * *
39824197 -TCTTGGATCTGCT-TCAGT-GTAAACACCT-GA-AGGCCAGATCTGGTATGTCTTCGATTTGCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCT-GT-T-TCTTCGATTTGTT
* * *
39824257 C-CTTGTAAACAA-A-AGA-ATGGCAAATCATCTTGGACCTGCTTC-GATGTGAAATCATCC-AA
118 CTC-TG---ACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-CA-CCTGA
* * * * ** *
39824316 AGGTCAAATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGAGATGCCAAATCTGCTTC
175 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAA--T-CATC
** * * * * * * * * *
39824379 TTCAATCCGC-TC--TCTG-ACA-AT---ACGG--AGAT-TCCAAATCATCTTAGATCCGCT-TC
234 TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGC-TAT-GTCTTCGATCTGCTCTC
* * * * * * *
39824432 AGT-GTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGTTTTGCTCT-TCGTA-AACACA-A
297 CGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCT-G-ACAATACAGA
** * * * *
39824491 GGATGCCAAATCATCTTATATCTGCTT-TGATGTAAAAACATCC-AAAGGTCCGATCTACTATGT
353 -GATGCCAAATCATCTTGGATCTGCTTCAG-TGT--AAACA-CCTGAAGGTCAGATCTGCTATGT
**
39824554 CTTCGATCTACT-CTCCATTG-AATA-TGAAG-
413 CTTCGAT-T--TGCTCC-TTGTAA-ACACAAGA
* * * * * * * *
39824583 ATGCCAAATCTGTTTCTTTGG-TTTG-TTC--TCTGACAATACA--GATATGCCA-A-AT-C-A-
1 ATGCCAAATC---ATC-TTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* ** * * * * * *
39824637 -TCTTGGATCTGCT-TTAGT-GTAAACACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTGCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTT
* * * *
39824697 C-CTTGTA-AACACA-AGAATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
* * * * * * ** ** * * *
39824758 GTTAGATCTGGTATGTCTTCGATCTGCT-CTCCGTCGAATA-TGGGCTGACAAATCTGGTTCTTC
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGAATGCCAAATC---ATCTTG
* * * * * * * *** *
39824821 GATTTG-TTC--TCTGACAATACA--GAGATGTCA-A-AT-C-A--TCTTGGATCAAAT-TCAGA
237 GATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTC--C
** * * * * * *
39824874 GTAAACAAAT--AAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCT-TGTA-AACACAGTA-AT
298 GTCGA-ATATGGAGATGCCAAATCTG-T-T-TCTTCGATTTG-TTCTCTG-ACAATACAG-AGAT
* * * * * * *
39824934 ACCAAATCATTTTGGATTTGCTTC-GATGTGAAATCGTCC-AAAGGTCAGATCTACTATGTCTCC
356 GCCAAATCATCTTGGATCTGCTTCAG-TGT-AAA-C-ACCTGAAGGTCAGATCTGCTATGTCTTC
* * * * **
39824997 GATCTTCTCTCCAT-CAAATA-TGGA
417 GAT-TT-GCTCCTTGTAAACACAAGA
* * * * * * * *
39825021 GATGCCAAATC-TGTTTGTTCGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A
1 -ATGCCAAATCAT-CTTG---GATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTA
* * * * *** * * *
39825076 --TCTTGGATCTACT-TCAGT-GTAAACACCTA-ATGGTCAGATCTGCTATGTCTTCGATTTGCT
59 TGTCTTCGATCTGCTCTCCGTCG--AATATGGAGAT-GCCAAATCTG-T-T-TCTTCGATTTGTT
* *
39825136 C-CTTGTA-AATACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
* * * * * * * *
39825197 GTCAGATCTGCTACGTCTTCGATCTACT-CTCCGTCGAATATGAAG-ATGCCAAATCTGTTTCTT
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACA-CAAGAATGCCAAATC---ATCTT
* * * * * * * * ** * * *
39825260 CGATTTG-TTC-A-CTG-ACA-ATACAGA-GACACCAAAT-C-A--TCTTGGATCCGCT-TCAG-
236 GGATCTGCTTCGATGTGAAAACATCCAAAGGTCA-GATCTGCTATGTCTTCGATCTGCTCTCCGT
* * * * * * * *
39825313 AGTAAGCACCT-GA-AGGTCAGATCGGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGAA
300 CG-AA-TA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-A
** * * * *
39825373 TGGTAAATCATCTTGGATATGCATCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTTC
355 TGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTTC
* * * * **
39825437 GATCTGCT-CTCCGTCGAATA-TGGA
417 GATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * *
39825461 GATGCCAAATCTGTTTCTTCGATTTG-TTCTATGAT-AATACA--GAGAA-GCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATG-TGAAAACATCCA-AAGGTCAGATCTGCTAT
* * * * * * * * * * **
39825516 -TCTTAGATGTACT-TCAGT-GTAAACACCT-GA-ACGTCAGATATGCTATGTCTTCAATTTACT
60 GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCA-A-AT-CTGTTTCTTCGATTTGTT
* * * * * * *
39825576 C-CTTGTA-AACACA-AGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
* * * * * ** * *
39825637 GTCAGATCTGCTATGTCTTCGATCTCCT-CTCCGTCGAATA-TGGAGATACCAAATCTGTTTCTT
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTT
* * * * * * * * * *
39825700 CGATTTG-TT--TTTTGACAATACA--GAGATGCCAGA--T-C-A--TCTTGGATCTGCT-TCAG
236 GGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG
* * * * * ** *
39825753 T-GTAAACAACT-GA-AGGTCAGATCTACTATTTCTTCGATTTACTCAT-TGTA-AACACA-AGA
299 TCG--AA-TA-TGGAGATGCCA-A-AT-CTGTTTCTTCGATTTGTTC-TCTG-ACAATACAGAG-
* * * *
39825812 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATC-AAAGGTCAGATCTGCTATGTCTTC
354 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTC
* * * * **
39825876 GATCTGCT-CTCCGTCGAATA-TGGA
417 GATTTGCTCCT-TGT-AAACACAAGA
* * * * * * * * *
39825900 GATGCCAAATCTGTTTCTTTGATTTG-TTC--TCTGACAATACA--GAGATGCCA-A-AT-C-A-
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTAT
* * * * * * *
39825955 -TCTTGGATATGCT-TCAGT-GTAAACACTTGA-A-GTCCAGATCTGCTATGTCTTCGATTTGCT
60 GTCTTCGATCTGCTCTCCGTCG--AATA-TGGAGATG-CCAAATCTG-T-T-TCTTCGATTTGTT
* * * * * *
39826015 C-CTTGTA-AACACA-AGAATGGCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCC-AAAG
118 CTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAAG
* * * ** *
39826076 GTCAGATCTGCTATGTCTTCGATCTGCT-CTCCGTCAAATA-TGGAGATGCCAAATCTGTTTCTT
177 GTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC---ATCTT
** * * * * * * * ** * *
39826139 CAATCCGC-TC--TCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTAAATCCGCT-TCAG
236 GGATCTGCTTCGATGTGA-AA-ACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG
* * * * *
39826192 T-GTAAACACCT-GA-AGGTCAAATCTGCTATGTCTTCGATTTGCTC-CTTGTA-AACACA-AGA
299 TCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTC-TG-ACAATACAGAG-
* * * * *
39826251 ATGCCAAATCATCTTAGATCTGCTTTGATCTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
354 ATGCCAAATCATCTTGGATCTGC-TTCA-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
* * *
39826315 CGATCTGCTCTCCATTG--AATA-TAGA
416 CGATTTG--CTCC-TTGTAAACACAAGA
* * * * * * *
39826340 GATGCCAAATCTGTTTCTTCGATTTG-TTC--TCTG-ACA-AT--ACA-G--AGA--TGCCAAAT
1 -ATGCCAAATC---ATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTG-C-TAT
* * * * * * * *
39826393 CGTCTTGGATCTG-TTTCAGT-GTAAAAACCT-GA-AGGTCAGATCTGCTATGTCTTCAATTTG-
60 -GTCTTCGATCTGCTCTCCGTCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGT
* * * * * *
39826453 CCCCTTGTA-AACACA-AGAATGCCAAATCATCTTGAATCTGCTTC-GTTATGCAAACATCC-AA
117 TCTC-TG-ACAATACAGAG-ATGCCAAATCATCTTGGATCTGCTTCAG---TGTAAACA-CCTGA
* * * * * * **
39826514 AGGTTAGATCTGCTATGCCTTCGATCTACT-CTCCGTCAAATA-TGGAGATGCCAAATCTATTTC
175 AGGTCAGATCTGCTATGTCTTCGATTTGCTCCT-TGT-AAACACAAGA-ATGCCAAATC-A--TC
* ** ** ** * * * * * * * * * *
39826577 TTCGAT-TTTTTCCCTGACAATACA--GAGATGCCA-A-AT-C-A--TCTTGGATCT-ATTTCAG
234 TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG
* * * ** * * * * **
39826632 T-GTAAACACCT-GA-AGGTCAGGTCTGCTATGTCTTCGATCTGTTTTCCGTCGAATATGGAGAT
299 TCG--AATA--TGGAGATGCCAAATCTG-T-T-TCTTCGATTTGTTCTCTGAC-AATACAGAGAT
39826694 GCCAAATCTATTTATTCAATTTGTTCTCAGATATGTAAAATCATCTTAGTTCTGCTTCAGTGTAA
356 GCCAAATC-----A-TC-------T-T--G----G------------A--TCTGCTTCAGTGTAA
* *
39826759 ACACCTAAAGGTCAGATCTGCTATGTCTTCGACTTGCTCCTTGTAAACACAAGA
387 ACACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39826813 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAATGTCATATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39826877 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGCTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39826942 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39827007 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACGTC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * ** *
39827072 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTGCATTTAATATGGAGATGCCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
*
39827137 CTTCGATTTGTTCTCTGACAATACAGAGATGACAAATCATCTTGGATCTGCTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * * * *
39827202 CTGAATGTCAGATCTGCTATGTCTTCAATTTACTCCTCGTAAACATAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * *
39827252 ATTCTAAATCATCTTGGATCTGCTTCAATGTGAAATCATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39827317 GATCTGCTCTCCGTCCAATATCGAGATGCCAAATCTGTTTCTTGGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39827382 GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTACTATTTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
* * * *
39827446 TTGATTTACTCCTTGTAAACACAAGAATGCCAAATCAACTTGGACCTGCTTCGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39827511 CCAAAGGTCAGATCTGCTATGTCTTCGATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* * *
39827576 TCTTTGATTTGTTCTCTGACAATAGAGAAATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* * * *
39827641 CCTGAAGGCCAGATCTGGTATGTCTTCGATTTGCTCCTTGTACACAAAAGA
390 CCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * *
39827692 ATGGCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** * *
39827757 GATATGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39827822 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * ** *
39827887 CGTTTTGCTCTTTGTAAACACAAGAATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATG
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * * * *
39827952 CAAAGGTCAGATCTGCTACGTCTTCGATCTGCTCTCCATTGAATATGAAGACGCCGAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * * * *
39828017 CTTTGGTTTATTCTCTGACAATACAGAGATGTCAAATTATCTTGGATCTGCTTTAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* *
39828082 CTGAAGGTCAGATCTACTATGTCTTCAATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * *
39828132 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39828197 GATCTGCTCTCCGTCGAATATGGGGATGACAAATCTGGTTCGTCAATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *** * ** *
39828262 GAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * *
39828327 CGATTTGCTTCTTGTAAACAC-AGTAATGCCAAATCA-CTTTGGATCTGCTTCGATATGAAATCG
196 CGATTTGCTCCTTGTAAACACAAG-AATGCCAAATCATC-TTGGATCTGCTTCGATGTGAAAACA
* * *
39828390 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGT
259 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGT
*
39828455 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAAC
324 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
* *
39828520 ACCTGAAGGTCAGATCTGCTATGTCTTCGACTTGCTCCTTGTAAACGCAAGA
389 ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
*
39828572 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39828637 GATCTACTCT-C--C------------G-----TCTGTTTCTTCGATTAGTTCACTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39828682 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39828747 CGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39828812 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
** ** * * *
39828877 CTTAAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGCTCTGCTTCGGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39828942 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39828992 ATGCCAAATCCTTTTGTATCTGCTTTGATGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39829057 GATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39829122 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39829187 CGATTTGCTCCTTGTAAAGACAAGAATGCCAAATCATCTTGGACCTGCATCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39829252 CAAAGGTTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAAT-GAGATGTCAAATCTGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAAT-ATGGAGATGCCAAATCTGTT
* *** * * *
39829316 TCTTCAATGCCCTT-TCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGC
325 TCTTCGAT-TTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
* *
39829380 ACTTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
389 ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
** * *
39829432 ATGGTAAATCATCTTAGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39829497 GATCTGCTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTCCTATGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39829562 GAGATGCCAAATCATCTTGGATGTACTTTAGTGTAAACACCTGAACGTCAGATCTGCAATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * * * * *
39829627 CAATTTACTCCTTGTAAAGACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* *
39829692 CAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGAT-CACAAATCTATT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGC-CAAATCTGTT
* * *
39829756 TCTTCGATTTGTTCTTTGATAATACAGAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
* * * * *
39829821 ACTAAAGGTCAGATCTACTATTTCTTTC-ATTTACTCCTTGTAAACACAAGA
390 CCTGAAGGTCAGATCTGCTATGTC-TTCGATTTGCTCCTTGTAAACACAAGA
*
39829872 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39829936 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCGTT-GATTTATTCTCTAACAATAC
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTC-TTCGATTTGTTCTCTGACAATAC
** * *
39830000 AGAGATGGAAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAA-GTCCAGATCTTCTATGTC
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTC
*
39830064 TTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACA
194 TTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACA
* * * * *
39830129 TCCAAAGGTTAGATCTGGTATGTCTTCGATCTGCTCTCCGTCGAATATGGGGATGACAAATCTGG
259 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGT
* * *** *
39830194 TTCTTCAATTTGTTCTCTGACAATACAGAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAAC
324 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
** * *
39830259 AAATAAAGGTCAGATCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTA
389 ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAG-A
* * * *
39830311 ATGCCAAATCATTTTGGATCTGCTTCGATATGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39830376 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39830441 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39830506 CGATTTACTCCTTGTAAACACAAGAACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
*
39830571 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
** ** * * *
39830636 CTTAAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTGGCTCTGCTTCGGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
*
39830701 CTGAAGGTCAGATCTGCTATGTCTTCGATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* * * * *
39830751 ATGCCAAATCATTTTGTATCTGCTTTGATGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39830816 GATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39830881 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39830946 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGCATCGATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39831011 CAAAGGTTAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATAAT-GAGATGTCAAATCTGTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAAT-ATGGAGATGCCAAATCTGTT
* *** * * *
39831075 TCTTCAATGCCCTT-TCTGACAATACAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGC
325 TCTTCGAT-TTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
*
39831139 ACCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
389 ACCTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
** *
39831191 ATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39831256 GATCTGCTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTCCTATGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39831321 GAGATGCCAAATCATCTTGGATGTACTTTAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * * * * * *
39831386 CAATTTACTCCTTGTAAAGACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * *
39831451 CAAAGGTCAGATCTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATCCCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * * * *
39831516 CTTCAATTTGTTATTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACAA
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
* * *
39831581 CTGAAGGTCAGATCTACTATTTCTTTC-ATTTACTCCTTGTAAACACAAGA
391 CTGAAGGTCAGATCTGCTATGTC-TTCGATTTGCTCCTTGTAAACACAAGA
*
39831631 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39831695 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCGTT-GATTTGTTCTCTGACAATAC
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTC-TTCGATTTGTTCTCTGACAATAC
*
39831759 AGAGATGGCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTC
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTC
* *
39831823 TTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACA
194 TTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACA
*
39831888 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGT
259 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGT
* ** * * * ** *
39831953 TTCTTCAATCCGCTCCCTGACAATACAGAGATGCAAAATCATCTTAAATCCGCTTCAGTGTAAAC
324 TTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
* *
39832018 ACCTGAAGGTC-GAATCTGCTATTTCTTCGATTTACTCCTTGTAAACACAAGA
389 ACCTGAAGGTCAG-ATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39832070 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39832134 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39832199 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
* *
39832263 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACAT
195 TCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
*
39832328 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
260 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
* ** * * ** *
39832393 TCTTCAATCCGCTCTCTAACAATACAGAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACA
325 TCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACA
*
39832458 CCTGAAGGTC-GAATCTGCTACGTCTTCGATTTGCTCCTTGTAAACACAAGA
390 CCTGAAGGTCAG-ATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
* *
39832509 ATGCCAAATCATCTTAGATCTGCTTCGATTTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39832574 GATCTGCTCTCCATTGAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39832639 GAGACGCCAAATCATCTTGGATCTGCTTCAGTGTAAAAACTTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
** * * * * *
39832704 TAATTTGCCCCTTGTAAACACAAGAATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATC
196 CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
* * * *
39832769 CAAAGGTTAGATCTGCTATGCCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTATTT
261 CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
* * *
39832834 CTTCGATTTTTTCCCTGACAATACAGAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAACAC
326 CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
39832899 CTGAAGGTCAGATCTGCTATGTCTTCGAT
391 CTGAAGGTCAGATCTGCTATGTCTTCGAT
39832928 CTCTTCTCCG
Statistics
Matches: 11791, Mismatches: 1363, Indels: 884
0.84 0.10 0.06
Matches are distributed among these distances:
420 369 0.03
421 4 0.00
422 3 0.00
423 7 0.00
424 54 0.00
425 49 0.00
426 50 0.00
427 38 0.00
428 95 0.01
429 31 0.00
430 76 0.01
431 5 0.00
432 7 0.00
433 12 0.00
434 14 0.00
435 13 0.00
436 152 0.01
437 314 0.03
438 818 0.07
439 3344 0.28
440 5820 0.49
441 88 0.01
442 46 0.00
443 29 0.00
444 21 0.00
445 2 0.00
446 2 0.00
447 2 0.00
453 1 0.00
454 1 0.00
455 1 0.00
457 1 0.00
459 1 0.00
460 1 0.00
461 1 0.00
467 2 0.00
468 17 0.00
469 13 0.00
470 4 0.00
471 34 0.00
472 48 0.00
473 61 0.01
474 59 0.01
475 17 0.00
476 7 0.00
477 41 0.00
478 12 0.00
479 2 0.00
480 2 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (440 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATC
CAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTT
CTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAC
CTGAAGGTCAGATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGA
Found at i:39820235 original size:87 final size:88
Alignment explanation
Indices: 39820115--39820277 Score: 233
Period size: 89 Copynumber: 1.9 Consensus size: 88
39820105 ACAATACGGA
*
39820115 GATGCCAAATCATCTTAGATCCGCTTCAGTGT-AAACA-CCTGAAGGTCAAATCTGCTATGTCTT
1 GATGCCAAATCATCTTAGATCCGCTTCAGTGTAAAACATCC-AAAGGTCAAATCTGCTATGTCTT
*
39820178 CGTTTTGCTCTTCGTAAACACAAG
65 CGATTTGCTCTTCGTAAACACAAG
* * *
39820202 GATGCCAAATCATCTTATATCTGCTTC-GATGTAAAAACATCCAAAGGTCAGATCTGCTATGTCT
1 GATGCCAAATCATCTTAGATCCGCTTCAG-TGT-AAAACATCCAAAGGTCAAATCTGCTATGTCT
39820266 TCGATTTGCTCT
64 TCGATTTGCTCT
39820278 CCGTCGAATA
Statistics
Matches: 67, Mismatches: 5, Indels: 6
0.86 0.06 0.08
Matches are distributed among these distances:
86 1 0.01
87 28 0.42
89 36 0.54
90 2 0.03
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.33
Consensus pattern (88 bp):
GATGCCAAATCATCTTAGATCCGCTTCAGTGTAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
GATTTGCTCTTCGTAAACACAAG
Found at i:39820932 original size:89 final size:87
Alignment explanation
Indices: 39820772--39820932 Score: 216
Period size: 89 Copynumber: 1.8 Consensus size: 87
39820762 CAATACAGAG
* * * *
39820772 ATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAA
1 ATGCCAAATCATCTTGAATCTGCTTTAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCCTCAA
*
39820837 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* *
39820859 ATGCCAAATCATCTTGAATCTGCTTTGATGTGAAAACATCC-AAAGGTTAGATCTGGTATGTCCT
1 ATGCCAAATCATCTTGAATCTGCTTT-A-GTGAAAACA-CCTAAAGGTCAGATCTGCTATGTCCT
*
39820923 CGATCTGCTC
63 CAATCTGCTC
39820933 TCCGTCGAAT
Statistics
Matches: 63, Mismatches: 8, Indels: 4
0.84 0.11 0.05
Matches are distributed among these distances:
87 25 0.40
88 1 0.02
89 35 0.56
90 2 0.03
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (87 bp):
ATGCCAAATCATCTTGAATCTGCTTTAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCCTCAA
TCTGCTCCTTGTAAACACAAGA
Found at i:39822502 original size:44 final size:43
Alignment explanation
Indices: 39822454--39822536 Score: 103
Period size: 43 Copynumber: 1.9 Consensus size: 43
39822444 ATCTGCTATG
* **
39822454 TCTTTGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTT
1 TCTTTGATCTGCTCTCCGAC-AATACAGAGATGCCAAATCTGTT
* * *
39822498 TCTTTGATTTGTTCTCTGACAATACAGAGATGCCAAATC
1 TCTTTGATCTGCTCTCCGACAATACAGAGATGCCAAATC
39822537 ATCTTGGATA
Statistics
Matches: 33, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
43 17 0.52
44 16 0.48
ACGTcount: A:0.24, C:0.22, G:0.18, T:0.36
Consensus pattern (43 bp):
TCTTTGATCTGCTCTCCGACAATACAGAGATGCCAAATCTGTT
Found at i:39822897 original size:89 final size:87
Alignment explanation
Indices: 39822747--39822907 Score: 216
Period size: 89 Copynumber: 1.8 Consensus size: 87
39822737 CAATACAGAG
* * * *
39822747 ATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTTGA
1 ATGCCAAATCATCTTAAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTACTATGTCTTCGA
*
39822812 TTTGCTCCTTGTAATCACAAGA
66 TCTGCTCCTTGTAATCACAAGA
* * *
39822834 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTACTATGTCTT
1 ATGCCAAATCATCTTAAATCCGCTTC-A-GTGAAAACA-CCTAAAGGTCAAATCTACTATGTCTT
39822898 CGATCTGCTC
63 CGATCTGCTC
39822908 TCCATTGAAT
Statistics
Matches: 63, Mismatches: 8, Indels: 4
0.84 0.11 0.05
Matches are distributed among these distances:
87 24 0.38
88 1 0.02
89 36 0.57
90 2 0.03
ACGTcount: A:0.29, C:0.24, G:0.16, T:0.32
Consensus pattern (87 bp):
ATGCCAAATCATCTTAAATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTACTATGTCTTCGA
TCTGCTCCTTGTAATCACAAGA
Found at i:39823672 original size:220 final size:220
Alignment explanation
Indices: 39823185--39826669 Score: 4992
Period size: 220 Copynumber: 15.9 Consensus size: 220
39823175 CAATACAGAG
* * *
39823185 ATGCCAAATCATCTTGGATCTGTTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
* * * * *
39823247 CGATCTGTTCTCCATCGAATATGGAGATGCCAAATCTATTTATTCAATTTG---T-T--C--T-C
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* ** * * * * * *
39823303 AGATATGTAAAATCATCTTAGTTCTGCTTCAGTGTAAACACCTAAAGGTCAAATATGCTATATCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* * *
39823368 TCGACTTGCTCCTTGTAAACTCCAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
*
39823394 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCATATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39823458 GATCTACTCTCCGTCGAATATGGAGATGCAAAATCTATTTCTTCGATTTGTTCTCTAACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39823523 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACGCCTGAAGGTCATATCTGATATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39823588 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39823613 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39823678 GATCTGCTCTCCGTTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* ** * *
39823743 GACATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAATTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39823808 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39823833 ATGCCAAATCATCTTAGACCTGCTTCGATGTTAAAACATCCAAAGGTCAGATTTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39823898 GATCTCCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCATCAATTTGTTCTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * *
39823963 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAATTGAAGGTCAAATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39824028 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39824053 ATGTCAAATCATCTTGGACCTGCTTCGATGTGTAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39824118 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39824183 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39824248 CGATTTGCTCCTTGTAAACAAAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39824273 ATGGCAAATCATCTTGGACCTGCTTCGATGTGAAATCATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** * *
39824338 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGCTTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39824403 GAGATTCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39824468 CGTTTTGCT-CTTCGTAAACACAAGG
196 CGATTTGCTCCTT-GTAAACACAAGA
** * * * *
39824493 ATGCCAAATCATCTTATATCTGCTTTGATGTAAAAACATCCAAAGGTCCGATCTACTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * *
39824558 GATCTACTCTCCATTGAATATGAAGATGCCAAATCTGTTTCTTTGGTTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39824623 GATATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39824688 CAATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39824713 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39824778 GATCTGCTCTCCGTCGAATATGG-GCTGACAAATCTGGTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *** * ** *
39824842 GAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39824907 CGATTTGCTTCTTGTAAACAC-AGTA
196 CGATTTGCTCCTTGTAAACACAAG-A
* * * * * * *
39824932 ATACCAAATCATTTTGGATTTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTACTATGTCTCC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39824997 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTGTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39825062 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AATGGTCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GGTCAGATCTGCTATGTCT
*
39825126 TCGATTTGCTCCTTGTAAATACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
*
39825152 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39825217 GATCTACTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCACTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * * * *
39825282 GAGACACCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39825347 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** * *
39825372 ATGGTAAATCATCTTGGATATGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39825437 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTATGATAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * * *
39825502 GAGAAGCCAAATCATCTTAGATGTACTTCAGTGTAAACACCTGAACGTCAGATATGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39825567 CAATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39825592 ATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39825657 GATCTCCTCTCCGTCGAATATGGAGATACCAAATCTGTTTCTTCGATTTGTTTTTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39825722 GAGATGCCAGATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39825787 CGATTTACTCATTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39825812 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39825876 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39825941 GAGATGCCAAATCATCTTGGATATGCTTCAGTGTAAACACTTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39826005 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* * *
39826031 ATGGCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39826096 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39826161 GAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39826226 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39826251 ATGCCAAATCATCTTAGATCTGCTTTGATCTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39826316 GATCTGCTCTCCATTGAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39826381 GAGATGCCAAATCGTCTTGGATCTGTTTCAGTGTAAAAACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39826446 CAATTTGCCCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39826471 ATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39826536 GATCTACTCTCCGTCAAATATGGAGATGCCAAATCTATTTCTTCGATTTTTTCCCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** *
39826601 GAGATGCCAAATCATCTTGGATCTATTTCAGTGTAAACACCTGAAGGTCAGGTCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39826666 CGAT
196 CGAT
39826670 CTGTTTTCCG
Statistics
Matches: 2925, Mismatches: 328, Indels: 35
0.89 0.10 0.01
Matches are distributed among these distances:
208 21 0.01
209 4 0.00
210 74 0.03
211 2 0.00
213 1 0.00
214 1 0.00
216 1 0.00
218 5 0.00
219 471 0.16
220 2336 0.80
221 9 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.33
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39824391 original size:44 final size:43
Alignment explanation
Indices: 39824333--39824415 Score: 103
Period size: 43 Copynumber: 1.9 Consensus size: 43
39824323 ATCTGCTATG
* * * *
39824333 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGCT
1 TCTTCAATCCGCTCTCCGAC-AATACGGAGATGCCAAATCTGCT
* *
39824377 TCTTCAATCCGCTCTCTGACAATACGGAGATTCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATC
39824416 ATCTTAGATC
Statistics
Matches: 33, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
43 17 0.52
44 16 0.48
ACGTcount: A:0.25, C:0.29, G:0.16, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACGGAGATGCCAAATCTGCT
Found at i:39824775 original size:89 final size:87
Alignment explanation
Indices: 39824626--39824786 Score: 216
Period size: 89 Copynumber: 1.8 Consensus size: 87
39824616 CAATACAGAT
* * * *
39824626 ATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAA
1 ATGCCAAATCATCTTGAATCTGCTTGAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCAA
*
39824691 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* *
39824713 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCC-AAAGGTTAGATCTGGTATGTCTT
1 ATGCCAAATCATCTTGAATCTGCTT-GA-GTGAAAACA-CCTAAAGGTCAGATCTGCTATGTCTT
*
39824777 CGATCTGCTC
63 CAATCTGCTC
39824787 TCCGTCGAAT
Statistics
Matches: 63, Mismatches: 8, Indels: 4
0.84 0.11 0.05
Matches are distributed among these distances:
87 24 0.38
88 1 0.02
89 36 0.57
90 2 0.03
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.32
Consensus pattern (87 bp):
ATGCCAAATCATCTTGAATCTGCTTGAGTGAAAACACCTAAAGGTCAGATCTGCTATGTCTTCAA
TCTGCTCCTTGTAAACACAAGA
Found at i:39825158 original size:87 final size:89
Alignment explanation
Indices: 39825056--39825219 Score: 246
Period size: 89 Copynumber: 1.9 Consensus size: 89
39825046 GTTCTCTGAC
* *
39825056 AATACAGAGATGCCAAATCATCTTGGATCTACTTC-A-GTGTAAACA-CCTAATGGTCAGATCTG
1 AATACAGAGATGCCAAATCATCTTGGATCTACTTCGATGTGAAAACATCC-AAAGGTCAGATCTG
*
39825118 CTATGTCTTCGATTTGCTCCTTGTA
65 CTACGTCTTCGATTTGCTCCTTGTA
*
39825143 AATACA-AGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTG
1 AATACAGAG-ATGCCAAATCATCTTGGATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTG
39825207 CTACGTCTTCGAT
65 CTACGTCTTCGAT
39825220 CTACTCTCCG
Statistics
Matches: 69, Mismatches: 4, Indels: 6
0.87 0.05 0.08
Matches are distributed among these distances:
86 2 0.03
87 31 0.45
88 1 0.01
89 33 0.48
90 2 0.03
ACGTcount: A:0.30, C:0.22, G:0.18, T:0.30
Consensus pattern (89 bp):
AATACAGAGATGCCAAATCATCTTGGATCTACTTCGATGTGAAAACATCCAAAGGTCAGATCTGC
TACGTCTTCGATTTGCTCCTTGTA
Found at i:39825229 original size:879 final size:879
Alignment explanation
Indices: 39823185--39826669 Score: 5042
Period size: 879 Copynumber: 4.0 Consensus size: 879
39823175 CAATACAGAG
* * *
39823185 ATGCCAAATCATCTTGGATCTGTTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTG-AAACATCC-AAAGGTCAGATCTGCTATGTCTT
* * *
39823247 CGATCTGT-TCTCCATCGAATATGGAGATGCCAAATCTATTTATTCAATTTG---T-T--C--T-
64 CGATCT-TCTCTCCATCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATA
* ** * * * * * *
39823302 CAGATATGTAAAATCATCTTAGTTCTGCTTCAGTGTAAACACCTAAAGGTCAAATATGCTATATC
128 CAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC
* * * *
39823367 TTCGACTTGCTCCTTGTAAACTCCAGAAT-GCAAATCATCTTGGATCTGCTTCGATGTGAAAACA
193 TTCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACA
* * * *
39823431 TCCAAAGGTCATATCTGCTATGTCTTCGATCTACTCTCCGTCGAATATGGAGATGCAAAATCTAT
258 TCCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGT
* ** * * * *
39823496 TTCTTCGATTTGTTCTCTAACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAAC
323 TTCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAAC
* * * * *
39823561 GCCTGAAGGTCATATCTGATATGTCTTCGATTTACTCCTTGTAAACACAAGAACGCCAAATCATC
388 ACCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATC
* *
39823626 TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCG
453 TTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCA
* * *
39823691 TTGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGCTCTCTGACAATACAGACATGCCAAATC
518 TTGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC
** * * *
39823756 ATCTTGGATCTGCTTCAGTGTAAACAATTGAAGGTCAGATCTACTATTTCTTCGATTTACTCCTT
583 ATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTT
* * *
39823821 GTAAACACAAGAATGCCAAATCATCTTAGACCTGCTTCGATGTTAAAACATCCAAAGGTCAGATT
648 GTAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATC
* * *
39823886 TGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCATCAATTTGTTC
713 TGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGACAAATCTGTTTCTTCGATTTGTTC
* * * *
39823951 TTTGACAATACAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACAATTGAAGGTCAAAT
778 TCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAACTGAAGGTCAGAT
* *
39824016 CTACTATTTCTTCGATTTACTCCTTGTAAACACAAGA
843 CTACTATGTCTTCGATTTACTTCTTGTAAACACAAGA
*
39824053 ATGTCAAATCATCTTGGACCTGCTTCGATGTGTAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39824118 GAT-TTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATAC
65 GATCTT-CTCTCCATCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* *
39824182 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCT
129 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* *
39824247 TCGATTTGCTCCTTGTAAACAAAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAATCAT
194 TCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT
* * *
39824312 CCAAAGGTCAAATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGCT
259 CCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTT
* *
39824377 TCTTCAATCCGCTCTCTGACAATACGGAGATTCCAAATCATCTTAGATCCGCTTCAGTGTAAACA
324 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACA
* *
39824442 CCTGAAGGTCAAATCTGCTATGTCTTCGTTTTGCT-CTTCGTAAACACAAGGATGCCAAATCATC
389 CCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTT-GTAAACACAAGAATGCCAAATCATC
* * * * * *
39824506 TTATATCTGCTTTGATGTAAAAACATCCAAAGGTCCGATCTACTATGTCTTCGATCTACTCTCCA
453 TTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCA
* * *
39824571 TTGAATATGAAGATGCCAAATCTGTTTCTTTGGTTTGTTCTCTGACAATACAGATATGCCAAATC
518 TTGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC
* *
39824636 ATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCTCCTT
583 ATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTT
*
39824701 GTAAACACAAGAATGCCAAATCATCTT-GAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGAT
648 GTAAACACAAGAATGCCAAATCATCTTAG-ATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT
* * * *
39824765 CTGGTATGTCTTCGATCTGCTCTCCGTCGAATATGG-GCTGACAAATCTGGTTCTTCGATTTGTT
712 CTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGACAAATCTGTTTCTTCGATTTGTT
* * * * * *
39824829 CTCTGACAATACAGAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGA
777 CTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAACTGAAGGTCAGA
* *
39824894 TCTGCTATGTCTTCGATTTGCTTCTTGTAAACAC-AGTA
842 TCTACTATGTCTTCGATTTACTTCTTGTAAACACAAG-A
* * ** * * *
39824932 ATACCAAATCATTTTGGATTTGCTTCGATGTGAAATCGTCCAAAGGTCAGATCTACTATGTCTCC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAA-CATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39824997 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTGTTCGATTTGTTCTCTGACAATACA
65 GATCTTCTCTCCATCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39825062 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCT-AATGGTCAGATCTGCTATGTCT
130 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GGTCAGATCTGCTATGTCT
* * *
39825126 TCGATTTGCTCCTTGTAAATACAAGAATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACAT
194 TCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT
* * *
39825191 CCAAAGGTCAGATCTGCTACGTCTTCGATCTACTCTCCGTCGAATATGAAGATGCCAAATCTGTT
259 CCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTT
* ** * * ** * * *
39825256 TCTTCGATTTGTTCACTGACAATACAGAGACACCAAATCATCTTGGATCCGCTTCAGAGTAAGCA
324 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACA
* * **
39825321 CCTGAAGGTCAGATCGGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGGTAAATCATCT
389 CCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
* * * *
39825386 TGGATATGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGT
454 TAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCAT
* * * * *
39825451 CGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTATGATAATACAGAGAAGCCAAATCA
519 TGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCA
* * * * *
39825516 TCTTAGATGTACTTCAGTGTAAACACCTGAACGTCAGATATGCTATGTCTTCAATTTACTCCTTG
584 TCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTG
* * * *
39825581 TAAACACAAGAATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCT
649 TAAACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCT
*
39825646 GCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGAT-ACCAAATCTGTTTCTTCGATTTGTTT
714 GCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGA-CAAATCTGTTTCTTCGATTTGTTC
* * *
39825710 TTTGACAATACAGAGATGCCAGATCATCTTGGATCTGCTTCAGTGTAAACAACTGAAGGTCAGAT
778 TCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAACTGAAGGTCAGAT
*
39825775 CTACTATTTCTTCGATTTAC-TCATTGTAAACACAAGA
843 CTACTATGTCTTCGATTTACTTC-TTGTAAACACAAGA
39825812 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTG-AAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39825876 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
65 GATCTTCTCTCCATCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39825941 GAGATGCCAAATCATCTTGGATATGCTTCAGTGTAAACACTTGAA-GTCCAGATCTGCTATGTCT
130 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
*
39826005 TCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGGTTCGATGTGAAAACAT
194 TCGATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT
*
39826070 CCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
259 CCAAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTT
*
39826135 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACA
324 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACA
39826200 CCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
389 CCTGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCT
* *
39826265 TAGATCTGCTTTGATCTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCAT
454 TAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCAT
39826330 TGAATAT-AGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC
519 TGAATATGA-AGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATC
* * * * *
39826394 GTCTTGGATCTGTTTCAGTGTAAAAACCTGAAGGTCAGATCTGCTATGTCTTCAATTTGCCCCTT
583 ATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTT
* * * *
39826459 GTAAACACAAGAATGCCAAATCATCTT-GAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGAT
648 GTAAACACAAGAATGCCAAATCATCTTAG-ATCTGCTTCGATGTGAAAACATCCAAAGGTCAGAT
* * * * * *
39826523 CTGCTATGCCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTATTTCTTCGATTTTTT
712 CTGCTATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGACAAATCTGTTTCTTCGATTTGTT
* * * *
39826588 CCCTGACAATACAGAGATGCCAAATCATCTTGGATCTATTTCAGTGTAAACACCTGAAGGTCAGG
777 CTCTGACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAACTGAAGGTCAGA
*
39826653 TCTGCTATGTCTTCGAT
842 TCTACTATGTCTTCGAT
39826670 CTGTTTTCCG
Statistics
Matches: 2319, Mismatches: 265, Indels: 55
0.88 0.10 0.02
Matches are distributed among these distances:
868 24 0.01
869 2 0.00
870 73 0.03
871 2 0.00
873 1 0.00
874 1 0.00
876 1 0.00
878 11 0.00
879 1584 0.68
880 615 0.27
881 5 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.33
Consensus pattern (879 bp):
ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAACATCCAAAGGTCAGATCTGCTATGTCTTCG
ATCTTCTCTCCATCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAG
AGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTC
GATTTGCTCCTTGTAAACACAAGAATGGCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC
AAAGGTCAGATCTGCTATGTCTTCGATCTACTCTCCGTCAAATATGGAGATGCCAAATCTGTTTC
TTCAATCCGCTCTCTGACAATACAGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACC
TGAAGGTCAAATCTGCTATGTCTTCGATTTGCTCCTTGTAAACACAAGAATGCCAAATCATCTTA
GATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTCGATCTGCTCTCCATTG
AATATGAAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACAGAGATGCCAAATCATC
TTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTTCAATTTACTCCTTGTA
AACACAAGAATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGC
TATGTCTTCGATCTCCTCTCCGTCGAATATGGAGATGACAAATCTGTTTCTTCGATTTGTTCTCT
GACAATACAGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACAACTGAAGGTCAGATCTA
CTATGTCTTCGATTTACTTCTTGTAAACACAAGA
Found at i:39826149 original size:44 final size:43
Alignment explanation
Indices: 39826091--39826173 Score: 103
Period size: 43 Copynumber: 1.9 Consensus size: 43
39826081 ATCTGCTATG
* * * **
39826091 TCTTCGATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTT
1 TCTTCAATCCGCTCTCCGAC-AATACAGAGATGCCAAATCTGTT
*
39826135 TCTTCAATCCGCTCTCTGACAATACAGAGATGCCAAATC
1 TCTTCAATCCGCTCTCCGACAATACAGAGATGCCAAATC
39826174 ATCTTAAATC
Statistics
Matches: 33, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
43 17 0.52
44 16 0.48
ACGTcount: A:0.27, C:0.28, G:0.16, T:0.30
Consensus pattern (43 bp):
TCTTCAATCCGCTCTCCGACAATACAGAGATGCCAAATCTGTT
Found at i:39826931 original size:44 final size:43
Alignment explanation
Indices: 39826872--39826954 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
39826862 ATCTGCTATG
* *
39826872 TCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTT
1 TCTTCGATCTACTCTCCGAC-AATATAGAGATGCCAAATCTGTT
* * *
39826916 TCTTCGATTTGCTCTCTGACAATATAGAGATGCCAAATC
1 TCTTCGATCTACTCTCCGACAATATAGAGATGCCAAATC
39826955 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
43 18 0.53
44 16 0.47
ACGTcount: A:0.25, C:0.24, G:0.17, T:0.34
Consensus pattern (43 bp):
TCTTCGATCTACTCTCCGACAATATAGAGATGCCAAATCTGTT
Found at i:39827091 original size:220 final size:220
Alignment explanation
Indices: 39826604--39832927 Score: 8922
Period size: 220 Copynumber: 28.9 Consensus size: 220
39826594 CAATACAGAG
** * * *
39826604 ATGCCAAATCATCTTGGATCTATTTC-A-GTGTAAACA-CCTGAAGGTCAGGTCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
* * * * *
39826666 CGATCTGTTTTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG---T-T--C--T-C
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* ** * * *
39826722 AGATATGTAAAATCATCTTAGTTCTGCTTCAGTGTAAACACCTAAAGGTCAGATCTGCTATGTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
*
39826787 TCGACTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39826813 ATG-CAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAATGTCATATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39826877 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGCTCTCTGACAATATA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39826942 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39827007 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* *
39827032 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** *
39827097 GATCTGCTCTGCATTTAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39827162 GAGATGACAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAATGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * * *
39827227 CAATTTACTCCTCGTAAACATAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39827252 ATTCTAAATCATCTTGGATCTGCTTCAATGTGAAATCATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39827317 GATCTGCTCTCCGTCCAATATCGAGATGCCAAATCTGTTTCTTGGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39827382 GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTACTATTTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
* *
39827446 TTGATTTACTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39827472 ATGCCAAATCAACTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39827537 GATTTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATAGA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39827602 GAAATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39827667 CGATTTGCTCCTTGTACACAAAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * *
39827692 ATGGCAAATCATCTTGGACCTACTTCGATGTGAAAACATCCAAAGGTCAAATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ** * *
39827757 GATATGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTGACAATACG
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39827822 GAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* *
39827887 CGTTTTGCTCTTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
** * *
39827912 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATGCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * * * *
39827977 GATCTGCTCTCCATTGAATATGAAGACGCCGAATCTGTTTCTTTGGTTTATTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39828042 GAGATGTCAAATTATCTTGGATCTGCTTTAGTGTAAACACCTGAAGGTCAGATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39828107 CAATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39828132 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * *
39828197 GATCTGCTCTCCGTCGAATATGGGGATGACAAATCTGGTTCGTCAATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *** * ** *
39828262 GAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39828327 CGATTTGCTTCTTGTAAACAC-AGTA
196 CGATTTGCTCCTTGTAAACACAAG-A
* * *
39828352 ATGCCAAATCA-CTTTGGATCTGCTTCGATATGAAATCGTCCAAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATC-TTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTT
* * *
39828416 CGATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
65 CGATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
*
39828481 AGAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCT
* *
39828546 TCGACTTGCTCCTTGTAAACGCAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
*
39828572 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39828637 GATCTACTCT-C--C------------G-----TCTGTTTCTTCGATTAGTTCACTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39828682 GAGACACCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39828747 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39828772 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* ** ** *
39828837 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTAAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39828902 GAGATGCCAAATCATCTTGGCTCTGCTTCGGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39828967 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39828992 ATGCCAAATCCTTTTGTATCTGCTTTGATGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39829057 GATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39829122 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39829187 CGATTTGCTCCTTGTAAAGACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39829212 ATGCCAAATCATCTTGGACCTGCATCGATGTGAAAACATCCAAAGGTTAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ***
39829277 GATCTGCTCTCCGTCAAATAAT-GAGATGTCAAATCTGTTTCTTCAATGCCCTT-TCTGACAATA
66 GATCTGCTCTCCGTCGAAT-ATGGAGATGCCAAATCTGTTTCTTCGAT-TTGTTCTCTGACAATA
* * * * *
39829340 CAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACTTGAAGGTCAGATCGGCTATGTC
129 CAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC
39829405 TTCGATTTGCTCCTTGTAAACACAAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
** * *
39829432 ATGGTAAATCATCTTAGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39829497 GATCTGCTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTCCTATGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39829562 GAGATGCCAAATCATCTTGGATGTACTTTAGTGTAAACACCTGAACGTCAGATCTGCAATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39829627 CAATTTACTCCTTGTAAAGACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39829652 ATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39829717 GATCTCCTCTCCGTCGAATATGGAGAT-CACAAATCTATTTCTTCGATTTGTTCTTTGATAATAC
66 GATCTGCTCTCCGTCGAATATGGAGATGC-CAAATCTGTTTCTTCGATTTGTTCTCTGACAATAC
* * * * *
39829781 AGAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACAACTAAAGGTCAGATCTACTATTTCT
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC-
*
39829846 TTC-ATTTACTCCTTGTAAACACAAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
*
39829872 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39829936 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCGTT-GATTTATTCTCTAACAATAC
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTC-TTCGATTTGTTCTCTGACAATAC
** * *
39830000 AGAGATGGAAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAA-GTCCAGATCTTCTATGTC
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTC
39830064 TTCGATTTGCTCCTTGTAAACACAAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
* * *
39830091 ATGCCAAATCATCTTGAATCTGCTTCGATGTGAAAACATCCAAAGGTTAGATCTGGTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39830156 GATCTGCTCTCCGTCGAATATGGGGATGACAAATCTGGTTCTTCAATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *** * ** *
39830221 GAGATGTCAAATCATCTTGGATCAAATTCAGAGTAAACAAATAAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39830286 CGATTTGCTTCTTGTAAACAC-AGTA
196 CGATTTGCTCCTTGTAAACACAAG-A
* * * *
39830311 ATGCCAAATCATTTTGGATCTGCTTCGATATGAAATCGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39830376 GATCTTCTCTCCATCAAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39830441 GAGATGCCAAATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGTCAAATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39830506 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
*
39830531 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* ** ** *
39830596 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTAAATCCGCTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* *
39830661 GAGATGCCAAATCATCTTGGCTCTGCTTCGGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
*
39830726 CGATTTACTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39830751 ATGCCAAATCATTTTGTATCTGCTTTGATGTGAAAACAACCAAAGGTCAGACCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39830816 GATCTACCCTCCGTCGAATATAGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * * *
39830881 GAGATGCCATATCATCTTGGATCTACTTCAGTGTAAACACCTGAAGGCCATATCTACTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39830946 CGATTTGCTCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * *
39830971 ATGCCAAATCATCTTGGACCTGCATCGATGTGAAAACATCCAAAGGTTAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * ***
39831036 GATCTGCTCTCCGTCAAATAAT-GAGATGTCAAATCTGTTTCTTCAATGCCCTT-TCTGACAATA
66 GATCTGCTCTCCGTCGAAT-ATGGAGATGCCAAATCTGTTTCTTCGAT-TTGTTCTCTGACAATA
* * * *
39831099 CAGAGATGCCAAATCATCTTGGATCCGCTTCAGAGTAAGCACCTGAAGGTCAGATCGGCTATGTC
129 CAGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC
39831164 TTCGATTTGCTCCTTGTAAACACAAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
** *
39831191 ATGGTAAATCATCTTGGATCTGCATCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39831256 GATCTGCTCTCCGTCGAATATGAAGATGCCAAATCTGTTTCTTCGATTTGTCCTATGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39831321 GAGATGCCAAATCATCTTGGATGTACTTTAGTGTAAACACCTGAACGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
* * *
39831386 CAATTTACTCCTTGTAAAGACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * *
39831411 ATTCTAAATCATCTTAGATCTGTTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * * * *
39831476 GATCTCCTCTCCGTCGAATATGGAGATCCCAAATCTATTTCTTCAATTTGTTATTTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * * *
39831541 GAGATGCCAAATCATCTTGGATCTGCTTTAGTGTAAACAACTGAAGGTCAGATCTACTATTTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTC-T
*
39831606 TC-ATTTACTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
*
39831631 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
*
39831695 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCGTT-GATTTGTTCTCTGACAATAC
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTC-TTCGATTTGTTCTCTGACAATAC
*
39831759 AGAGATGGCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTC
130 AGAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTC
39831823 TTCGATTTGCTCCTTGTAAACACAAGA
194 TTCGATTTGCTCCTTGTAAACACAAGA
* *
39831850 ATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * *
39831915 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCCCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* ** * *
39831980 GAGATGCAAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTC-GAATCTGCTATTTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAG-ATCTGCTATGTCT
*
39832044 TCGATTTACTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39832070 ATGCCAAATCATCTTGGACCTACTTCGATGTGAAAACAT-CAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* *
39832134 AATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTTGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
39832199 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAA-GTCCAGATCTGCTATGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGT-CAGATCTGCTATGTCT
39832263 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39832289 ATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * ** * *
39832354 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTGTTTCTTCAATCCGCTCTCTAACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
** * *
39832419 GAGATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTC-GAATCTGCTACGTCT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAG-ATCTGCTATGTCT
39832483 TCGATTTGCTCCTTGTAAACACAAGA
195 TCGATTTGCTCCTTGTAAACACAAGA
* *
39832509 ATGCCAAATCATCTTAGATCTGCTTCGATTTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39832574 GATCTGCTCTCCATTGAATATAGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
* * *
39832639 GAGACGCCAAATCATCTTGGATCTGCTTCAGTGTAAAAACTTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
** *
39832704 TAATTTGCCCCTTGTAAACACAAGA
196 CGATTTGCTCCTTGTAAACACAAGA
* * * * * *
39832729 ATGCCAAATCATCTTGAATCTGCTTCGTTATGCAAACATCCAAAGGTTAGATCTGCTATGCCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * *
39832794 GATCTGCTCTCCGTCAAATATGGAGATGCCAAATCTATTTCTTCGATTTTTTCCCTGACAATACA
66 GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
*
39832859 GAGATGCCAAATCATCTTGGATCTGTTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
39832924 CGAT
196 CGAT
39832928 CTCTTCTCCG
Statistics
Matches: 5430, Mismatches: 613, Indels: 133
0.88 0.10 0.02
Matches are distributed among these distances:
200 184 0.03
201 1 0.00
203 1 0.00
205 1 0.00
208 20 0.00
209 4 0.00
210 72 0.01
211 2 0.00
213 1 0.00
214 1 0.00
215 1 0.00
216 1 0.00
217 1 0.00
218 13 0.00
219 689 0.13
220 4411 0.81
221 27 0.00
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.32
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
CGATTTGCTCCTTGTAAACACAAGA
Found at i:39827105 original size:89 final size:87
Alignment explanation
Indices: 39826945--39827105 Score: 234
Period size: 89 Copynumber: 1.8 Consensus size: 87
39826935 CAATATAGAG
* *
39826945 ATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTAGATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGA
*
39827010 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* * *
39827032 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACGTCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTAGATCCGCTTC-A-GTGAAAAC-ACCTAAAGGTCAAATCTGCTATGTCTT
39827096 CGATCTGCTC
63 CGATCTGCTC
39827106 TGCATTTAAT
Statistics
Matches: 65, Mismatches: 6, Indels: 4
0.87 0.08 0.05
Matches are distributed among these distances:
87 25 0.38
88 1 0.02
89 37 0.57
90 2 0.03
ACGTcount: A:0.28, C:0.24, G:0.17, T:0.30
Consensus pattern (87 bp):
ATGCCAAATCATCTTAGATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39827757 original size:89 final size:87
Alignment explanation
Indices: 39827604--39827765 Score: 209
Period size: 89 Copynumber: 1.8 Consensus size: 87
39827594 ACAATAGAGA
* * * * * *
39827604 AATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAAGGCCAGATCTGGTATGTCTTCG
1 AATGCCAAATCATCTTGGACCTACTTCAGTGAAAACACCTAAAGGCCAAATCTGCTATGTCTTCG
*
39827669 ATTTGCTCCTTGTACACAAAAG
66 ATATGCTCCTTGTACACAAAAG
* *
39827691 AATGGCAAATCATCTTGGACCTACTTCGATGTGAAAACATCC-AAAGGTCAAATCTGCTATGTCT
1 AATGCCAAATCATCTTGGACCTACTTC-A-GTGAAAACA-CCTAAAGGCCAAATCTGCTATGTCT
39827755 TCGATATGCTC
63 TCGATATGCTC
39827766 TCCGTCAAAT
Statistics
Matches: 63, Mismatches: 9, Indels: 4
0.83 0.12 0.05
Matches are distributed among these distances:
87 24 0.38
88 1 0.02
89 36 0.57
90 2 0.03
ACGTcount: A:0.29, C:0.23, G:0.19, T:0.30
Consensus pattern (87 bp):
AATGCCAAATCATCTTGGACCTACTTCAGTGAAAACACCTAAAGGCCAAATCTGCTATGTCTTCG
ATATGCTCCTTGTACACAAAAG
Found at i:39827919 original size:87 final size:88
Alignment explanation
Indices: 39827825--39827986 Score: 213
Period size: 89 Copynumber: 1.8 Consensus size: 88
39827815 CAATACGGAG
* *
39827825 ATGCCAAATCATCTTAGATCCGCTTC-A-GTGTAAACACCTG-AAGGTCAAATCTGCTATGTCTT
1 ATGCCAAATCATCTTAGATCCGCTTCGATGTG-AAA-ACATGAAAGGTCAAATCTGCTACGTCTT
* *
39827887 CGTTTTGCTCTTTGTAAACACAAGA
64 CGATCTGCTCTTTGTAAACACAAGA
* * *
39827912 ATGCCAAATCATCTTATATCTGCTTCGATGTGAAAACATGCAAAGGTCAGATCTGCTACGTCTTC
1 ATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATG-AAAGGTCAAATCTGCTACGTCTTC
39827977 GATCTGCTCT
65 GATCTGCTCT
39827987 CCATTGAATA
Statistics
Matches: 64, Mismatches: 7, Indels: 6
0.83 0.09 0.08
Matches are distributed among these distances:
87 28 0.44
88 4 0.06
89 32 0.50
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (88 bp):
ATGCCAAATCATCTTAGATCCGCTTCGATGTGAAAACATGAAAGGTCAAATCTGCTACGTCTTCG
ATCTGCTCTTTGTAAACACAAGA
Found at i:39827976 original size:89 final size:87
Alignment explanation
Indices: 39827825--39827986 Score: 211
Period size: 87 Copynumber: 1.8 Consensus size: 87
39827815 CAATACGGAG
* * *
39827825 ATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGT
1 ATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACATGAAGGTCAAATCTGCTACGTCTTCGA
*
39827890 TTTGCTCTTTGTAAACACAAGA
66 TCTGCTCTTTGTAAACACAAGA
* * *
39827912 ATGCCAAATCATCTTATATCTGCTTC-GATGTGAAA-ACATGCAAAGGTCAGATCTGCTACGTCT
1 ATGCCAAATCATCTTAGATCCGCTTCAG-TGT-AAACACATG--AAGGTCAAATCTGCTACGTCT
39827975 TCGATCTGCTCT
62 TCGATCTGCTCT
39827987 CCATTGAATA
Statistics
Matches: 64, Mismatches: 7, Indels: 6
0.83 0.09 0.08
Matches are distributed among these distances:
86 1 0.02
87 31 0.48
88 3 0.05
89 29 0.45
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (87 bp):
ATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACATGAAGGTCAAATCTGCTACGTCTTCGA
TCTGCTCTTTGTAAACACAAGA
Found at i:39832302 original size:87 final size:89
Alignment explanation
Indices: 39832202--39832362 Score: 231
Period size: 89 Copynumber: 1.8 Consensus size: 89
39832192 CAATACAGAG
* * *
39832202 ATGCCAAATCATCTTGGATCTGCTTC-A-GTGTAAACA-CCTGAA-GTCCAGATCTGCTATGTCT
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCC-AAAGGT-CAGATCTGCTATGTCT
*
39832263 TCGATTTGCTCCTTGTAAACACAAGA
64 TCGATCTGCTCCTTGTAAACACAAGA
*
39832289 ATGCCAAATCATCTTGGACCTGGTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
39832354 GATCTGCTC
66 GATCTGCTC
39832363 TCCGTCAAAT
Statistics
Matches: 65, Mismatches: 5, Indels: 6
0.86 0.07 0.08
Matches are distributed among these distances:
87 24 0.37
88 1 0.02
89 36 0.55
90 4 0.06
ACGTcount: A:0.27, C:0.24, G:0.19, T:0.30
Consensus pattern (89 bp):
ATGCCAAATCATCTTGGACCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTGCTCCTTGTAAACACAAGA
Found at i:39832572 original size:89 final size:87
Alignment explanation
Indices: 39832422--39832582 Score: 209
Period size: 89 Copynumber: 1.8 Consensus size: 87
39832412 CAATACAGAG
* *
39832422 ATGCCAAATCATCTTAAATCCGCTTCAGTGTAAACACCTGAAGGTCGAATCTGCTACGTCTTCGA
1 ATGCCAAATCATCTTAAATCCGCTTCAGTGAAAACACCTAAAGGTCGAATCTGCTACGTCTTCGA
*
39832487 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* * * *
39832509 ATGCCAAATCATCTTAGATCTGCTTCGATTTGAAAACATCC-AAAGGTC-AGATCTGCTATGTCT
1 ATGCCAAATCATCTTAAATCCGCTTC-A-GTGAAAACA-CCTAAAGGTCGA-ATCTGCTACGTCT
39832572 TCGATCTGCTC
62 TCGATCTGCTC
39832583 TCCATTGAAT
Statistics
Matches: 63, Mismatches: 7, Indels: 6
0.83 0.09 0.08
Matches are distributed among these distances:
87 24 0.38
88 2 0.03
89 35 0.56
90 2 0.03
ACGTcount: A:0.29, C:0.25, G:0.16, T:0.30
Consensus pattern (87 bp):
ATGCCAAATCATCTTAAATCCGCTTCAGTGAAAACACCTAAAGGTCGAATCTGCTACGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39833190 original size:44 final size:43
Alignment explanation
Indices: 39833131--39833213 Score: 112
Period size: 43 Copynumber: 1.9 Consensus size: 43
39833121 ATCTGCTATG
* *
39833131 TCTTCGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTT
1 TCTTCGATCTACTCTCCGAC-AATATAGAGATGCCAAATCTGTT
* * *
39833175 TCTTCGATTTGCTCTCTGACAATATAGAGATGCCAAATC
1 TCTTCGATCTACTCTCCGACAATATAGAGATGCCAAATC
39833214 ATCTTAGATC
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
43 18 0.53
44 16 0.47
ACGTcount: A:0.25, C:0.24, G:0.17, T:0.34
Consensus pattern (43 bp):
TCTTCGATCTACTCTCCGACAATATAGAGATGCCAAATCTGTT
Found at i:39833294 original size:220 final size:220
Alignment explanation
Indices: 39832862--39833785 Score: 1300
Period size: 220 Copynumber: 4.2 Consensus size: 220
39832852 CAATACAGAG
* * *
39832862 ATGCCAAATCATCTTGGATCTGTTTC-A-GTGTAAACA-CCTGAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCC-AAAGGTCAGATCTGCTATGTCTT
* *
39832924 CGATCT-CTTCTCCGTCGAATATGGAGATGCCAAATCTATTTATTCAATTTG---T-T--C--T-
65 CGATCTAC-TCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATA
* ** * * *
39832979 CAGATATGTAAAATCATCTTAGTTCTGCTTCAGTGTAAACACCTAAAGGTCAAATCTGCTATATC
129 CAGAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTC
* * *
39833044 TTCAACTTACTCCTTGTATACACCAGA
194 TTCAATTTACTCCTTGTAAACACAAGA
* *
39833071 ATG-CAAATCATCTTGGATCTGGTTCGATGTGAAAACATCCAAAGGGTCATATCTGCTATGTCTT
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAA-GGTCAGATCTGCTATGTCTT
* * *
39833135 CGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTGTTTCTTCGATTTGCTCTCTGACAATAT
65 CGATCTACTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATAC
*
39833200 AGAGATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCT
130 AGAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCT
* *
39833265 TCGATTTGCTCCTTGTAAACACAAGA
195 TCAATTTACTCCTTGTAAACACAAGA
* *
39833291 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACGTCCAAAGGTCAGATCTGCTATGTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * * **
39833356 GATCTGCTCTGCATTTAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
* * *
39833421 GAGATGCCAAATCATCTTGGATCTGCTTCAGTGTAAACACCTGAATGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
* *
39833486 CAATTTACTCCTCGTTAACACAAGA
196 CAATTTACTCCTTGTAAACACAAGA
* * * *
39833511 ATTCTAAATCATCTTGGATCTGCTTCAATGTGAAAACATCCAAAGGTCAGATCTGCTATCTCTTC
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
* * *
39833576 GATCTACTCTCCGTCGAATATCGAGATGCAAAATCTGTTTCTTCGATTTGTTCTCTGACAATACA
66 GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
* * *
39833641 GAGATGCCAAATCATCTTGGATCTTCTTCAGTGTAAACACCTGAAGGTCAGATCTGCTATGTCTT
131 GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
* *
39833706 CGATTTACTCCTTGTAAACACAGGA
196 CAATTTACTCCTTGTAAACACAAGA
*
39833731 ACGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTG
1 ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTG
39833786 TGACACCCCT
Statistics
Matches: 636, Mismatches: 64, Indels: 19
0.88 0.09 0.03
Matches are distributed among these distances:
208 21 0.03
209 4 0.01
210 10 0.02
211 67 0.11
212 1 0.00
214 1 0.00
215 1 0.00
217 1 0.00
219 1 0.00
220 492 0.77
221 37 0.06
ACGTcount: A:0.28, C:0.22, G:0.17, T:0.33
Consensus pattern (220 bp):
ATGCCAAATCATCTTGGATCTGCTTCGATGTGAAAACATCCAAAGGTCAGATCTGCTATGTCTTC
GATCTACTCTCCGTCGAATATGGAGATGCCAAATCTATTTCTTCGATTTGTTCTCTGACAATACA
GAGATGCCAAATCATCTTAGATCTGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTT
CAATTTACTCCTTGTAAACACAAGA
Found at i:39833364 original size:89 final size:87
Alignment explanation
Indices: 39833204--39833364 Score: 234
Period size: 89 Copynumber: 1.8 Consensus size: 87
39833194 CAATATAGAG
* *
39833204 ATGCCAAATCATCTTAGATCCGCTTCAGTGTAAACACCTGAAGGTCAAATCTGCTATGTCTTCGA
1 ATGCCAAATCATCTTAGATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGA
*
39833269 TTTGCTCCTTGTAAACACAAGA
66 TCTGCTCCTTGTAAACACAAGA
* * *
39833291 ATGCCAAATCATCTTAGATCTGCTTCGATGTGAAAACGTCC-AAAGGTCAGATCTGCTATGTCTT
1 ATGCCAAATCATCTTAGATCCGCTTC-A-GTGAAAAC-ACCTAAAGGTCAAATCTGCTATGTCTT
39833355 CGATCTGCTC
63 CGATCTGCTC
39833365 TGCATTTAAT
Statistics
Matches: 65, Mismatches: 6, Indels: 4
0.87 0.08 0.05
Matches are distributed among these distances:
87 25 0.38
88 1 0.02
89 37 0.57
90 2 0.03
ACGTcount: A:0.28, C:0.24, G:0.17, T:0.30
Consensus pattern (87 bp):
ATGCCAAATCATCTTAGATCCGCTTCAGTGAAAACACCTAAAGGTCAAATCTGCTATGTCTTCGA
TCTGCTCCTTGTAAACACAAGA
Found at i:39836312 original size:47 final size:47
Alignment explanation
Indices: 39836246--39836530 Score: 428
Period size: 47 Copynumber: 6.1 Consensus size: 47
39836236 GAAATGATAG
39836246 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
*
39836293 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* *
39836340 TAAGGCCTAATAGCCGATGTGATGAATGTGAAAGTGTATATATGTAA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* *
39836387 TAAGGCCTAATGACCGATGTGATGAATGTGACAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
*
39836434 TAAGGCCTAATGGCCGATGTG-TGAATGTCAAAGTGTATATATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
* * * * * * * * *
39836480 CAGGGCCGAGTGGCCAACGTGATGGATGTGAAAGTGCATAAATGTGA
1 TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
39836527 TAAG
1 TAAG
39836531 TCCCGAAGGG
Statistics
Matches: 216, Mismatches: 21, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
46 38 0.18
47 178 0.82
ACGTcount: A:0.33, C:0.10, G:0.29, T:0.28
Consensus pattern (47 bp):
TAAGGCCTAATGGCCGATGTGATGAATGTGAAAGTGTATATATGTGA
Found at i:39836705 original size:37 final size:37
Alignment explanation
Indices: 39836649--39836727 Score: 115
Period size: 37 Copynumber: 2.1 Consensus size: 37
39836639 CCGAGCTCTA
* *
39836649 AAGACCCGATGACTACGTGTGGCA-ATTTTGTCCGGGT
1 AAGACCCGATAACTACGTGTGG-AGATTATGTCCGGGT
*
39836686 AAGACCCGATAACTTCGTGTGGAGATTATGTCCGGGT
1 AAGACCCGATAACTACGTGTGGAGATTATGTCCGGGT
39836723 AAGAC
1 AAGAC
39836728 TTCGTAATAA
Statistics
Matches: 38, Mismatches: 3, Indels: 2
0.88 0.07 0.05
Matches are distributed among these distances:
36 1 0.03
37 37 0.97
ACGTcount: A:0.25, C:0.20, G:0.29, T:0.25
Consensus pattern (37 bp):
AAGACCCGATAACTACGTGTGGAGATTATGTCCGGGT
Done.