Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_1386
Parameters: 2 7 7 80 10 50 1000
Length:  31986

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2476--2516
10
4.0
10
83
3
55
2
21
0
75
0.92
2484--2544
26
2.2
28
85
5
81
4
16
1
77
1.03
2484--2545
16
3.9
15
77
12
52
4
17
1
75
1.05
2499--2541
22
1.9
23
90
4
70
4
16
2
76
1.05
2484--2552
26
2.6
25
79
20
63
5
17
1
75
1.07
7693--7723
15
2.1
15
94
5
55
19
16
3
61
1.48
10935--11032
46
2.1
46
83
7
119
43
12
13
30
1.80
12412--12441
6
5.0
6
100
0
60
16
16
0
66
1.25
12403--12459
27
2.1
27
83
6
71
19
17
0
63
1.32
14604--14640
12
3.0
12
88
4
56
24
0
8
67
1.17
21721--21765
23
1.9
24
82
13
58
11
24
2
62
1.40
24092--24137
25
1.9
23
91
8
74
56
10
17
15
1.67
27672--27744
29
2.5
29
90
0
119
46
13
9
30
1.75
28923--29028
56
1.9
56
82
5
135
24
24
15
35
1.94
29290--29354
23
2.9
22
90
6
103
44
20
12
23
1.84
29576--29610
13
2.7
13
90
0
52
42
11
0
45
1.40

Tables:   1

The End!