Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_1389
Parameters: 2 7 7 80 10 50 1000
Length:  31965

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13060--13109
22
2.3
22
82
0
55
18
6
8
68
1.36
14002--14054
22
2.5
21
75
12
54
28
0
9
62
1.26
19897--19956
31
1.9
32
86
3
86
43
1
5
50
1.34
21116--21194
27
3.0
26
78
15
74
31
2
7
58
1.40
25784--25828
23
2.0
23
82
8
56
44
6
2
46
1.42
28907--29105
89
2.2
89
83
8
237
44
3
4
47
1.38
29223--29269
17
2.8
18
84
12
64
40
0
0
59
0.97
29135--29523
118
3.3
119
91
6
618
41
2
5
50
1.38
29335--29364
13
2.2
14
94
5
53
43
0
6
50
1.28
29359--29410
15
3.6
15
80
12
56
44
0
1
53
1.11
29618--29660
18
2.4
19
80
11
54
51
0
0
48
1.00
29461--29773
154
2.0
153
90
6
488
47
5
3
43
1.42

Tables:   1

The End!