Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold_377
Parameters: 2 7 7 80 10 50 1000
Length:  83435

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1081--1252
40
4.3
39
86
5
220
26
26
21
26
2.00
1081--1252
80
2.2
79
88
3
247
26
26
21
26
2.00
1081--1298
119
1.8
120
82
8
284
26
25
20
27
1.99
9267--9446
40
4.6
40
82
7
199
25
28
21
25
1.99
9267--9397
39
3.3
39
89
4
192
25
28
21
24
1.99
9267--9446
79
2.3
79
81
6
195
25
28
21
25
1.99
14068--14127
29
2.1
29
81
6
68
41
0
26
31
1.56
22206--22241
18
1.9
19
88
5
56
36
16
0
47
1.47
22472--22720
56
4.4
56
90
1
374
34
24
12
28
1.92
28427--28468
20
2.1
20
100
0
84
23
21
14
40
1.90
32943--33072
48
2.8
48
88
2
192
28
18
30
23
1.98
32898--33072
95
1.9
93
84
7
237
27
18
29
24
1.98
40351--40718
48
7.8
46
75
12
250
27
19
28
24
1.98
42282--42313
12
2.7
12
90
0
55
21
21
9
46
1.79
43943--43969
14
1.9
14
100
0
54
37
7
18
37
1.79
44218--44258
21
1.9
22
85
5
57
24
0
19
56
1.42
44642--44715
26
2.9
25
76
9
78
21
21
14
41
1.89
47797--48030
40
5.8
40
93
0
387
23
29
22
24
1.99
56152--56345
40
4.8
40
92
0
298
23
29
22
24
1.99
61045--61154
42
2.6
42
81
4
123
25
21
24
28
1.99
61005--61162
43
3.7
42
76
7
149
25
20
24
29
1.99
74727--74787
30
2.0
30
87
0
86
40
4
24
29
1.76

Tables:   1

The End!