Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: scaffold_4669
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 13934
ACGTcount: A:0.35, C:0.19, G:0.13, T:0.33
Found at i:2028 original size:16 final size:15
Alignment explanation
Indices: 1989--2028 Score: 53
Period size: 16 Copynumber: 2.5 Consensus size: 15
1979 AAAATATTAT
1989 TTATTTATTAATTAAA
1 TTATTT-TTAATTAAA
*
2005 TTGATTTTCAATTAAA
1 TT-ATTTTTAATTAAA
2021 TTATTTTT
1 TTATTTTT
2029 TCAACTCAAT
Statistics
Matches: 21, Mismatches: 2, Indels: 3
0.81 0.08 0.12
Matches are distributed among these distances:
15 5 0.24
16 12 0.57
17 4 0.19
ACGTcount: A:0.35, C:0.03, G:0.03, T:0.60
Consensus pattern (15 bp):
TTATTTTTAATTAAA
Found at i:4421 original size:18 final size:18
Alignment explanation
Indices: 4400--4434 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
4390 TAATATTACA
4400 AAAATAACAACATATAAC
1 AAAATAACAACATATAAC
* *
4418 AAAATTACAGCATATAA
1 AAAATAACAACATATAA
4435 TATAAAAATT
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 15 1.00
ACGTcount: A:0.63, C:0.14, G:0.03, T:0.20
Consensus pattern (18 bp):
AAAATAACAACATATAAC
Found at i:4550 original size:46 final size:44
Alignment explanation
Indices: 4473--4811 Score: 322
Period size: 46 Copynumber: 7.5 Consensus size: 44
4463 GGCAGCATAC
*
4473 ATACACAATTTGGACAGCACTTATACACAAAATTTAAAGCATGTAT
1 ATACA-AAATTGGACAGCA-TTATACACAAAATTTAAAGCATGTAT
* *** **
4519 ATACAAAATTGGACAGCATTGATTCACCAAAATTGGGCAGCATACAT
1 ATACAAAATTGGACAGCATT-ATACA-CAAAATT-TAAAGCATGTAT
* *
4566 ATACAAATTTGGACAGCACTTATACACAAAATATAACAGCATGTAT
1 ATACAAAATTGGACAGCA-TTATACACAAAATTTAA-AGCATGTAT
* *** **
4612 ATACAAAATTGGACAGCATTTATTCACCAAAATTGGCAGCATACAT
1 ATACAAAATTGGACAGCA-TTATACA-CAAAATTTAAAGCATGTAT
* *
4658 ACACAAATTTGGACAGCATTATACACAAAATTTAACAGCATGTAT
1 ATACAAAATTGGACAGCATTATACACAAAATTTAA-AGCATGTAT
* *** *
4703 ATACAAAATTGGACAGCATTATTCACCCAAAATTGGCAGCA--TAC
1 ATACAAAATTGGACAGCATTA-T-ACACAAAATTTAAAGCATGTAT
* *
4747 ATACCAATTTGGACAGCATTATACACAAAATTTAACAGCATGTAT
1 ATACAAAATTGGACAGCATTATACACAAAATTTAA-AGCATGTAT
*
4792 ATACAAAATTTGACAGCATT
1 ATACAAAATTGGACAGCATT
4812 GATTTATCAA
Statistics
Matches: 232, Mismatches: 49, Indels: 25
0.76 0.16 0.08
Matches are distributed among these distances:
42 9 0.04
43 5 0.02
44 30 0.13
45 67 0.29
46 76 0.33
47 43 0.19
48 2 0.01
ACGTcount: A:0.43, C:0.19, G:0.12, T:0.26
Consensus pattern (44 bp):
ATACAAAATTGGACAGCATTATACACAAAATTTAAAGCATGTAT
Found at i:4594 original size:23 final size:23
Alignment explanation
Indices: 4454--4810 Score: 210
Period size: 23 Copynumber: 15.8 Consensus size: 23
4444 TACAGCATTT
* **
4454 CACAAAATTGG-CAGCATACATA
1 CACAAATTTGGACAGCATGTATA
4476 CAC-AATTTGGACAGCACT-TATA
1 CACAAATTTGGACAGCA-TGTATA
*
4498 CACAAAATTT--AAAGCATGTATA
1 CAC-AAATTTGGACAGCATGTATA
* * *
4520 TACAAAATTGGACAGCAT-TGATT
1 CACAAATTTGGACAGCATGT-ATA
* * **
4543 CACCAAAATTGGGCAGCATACATA
1 CA-CAAATTTGGACAGCATGTATA
*
4567 TACAAATTTGGACAGCACT-TATA
1 CACAAATTTGGACAGCA-TGTATA
* *
4590 CACAAAATAT-AACAGCATGTATA
1 CAC-AAATTTGGACAGCATGTATA
* * * *
4613 TACAAAATTGGACAGCATTTATT
1 CACAAATTTGGACAGCATGTATA
* **
4636 CACCAAAATTGG-CAGCATACATA
1 CA-CAAATTTGGACAGCATGTATA
4659 CACAAATTTGGACAGCAT-TATA
1 CACAAATTTGGACAGCATGTATA
*
4681 CACAAAATTT-AACAGCATGTATA
1 CAC-AAATTTGGACAGCATGTATA
* *
4704 TACAAAATTGGACAGCAT-TATTCA
1 CACAAATTTGGACAGCATGTA-T-A
* * **
4728 CCCAAAATTGG-CAGCATACATA
1 CACAAATTTGGACAGCATGTATA
4750 C-C-AATTTGGACAGCAT-TATA
1 CACAAATTTGGACAGCATGTATA
*
4770 CACAAAATTT-AACAGCATGTATA
1 CAC-AAATTTGGACAGCATGTATA
*
4793 TACAAAATTT-GACAGCAT
1 CAC-AAATTTGGACAGCAT
4811 TGATTTATCA
Statistics
Matches: 266, Mismatches: 42, Indels: 53
0.74 0.12 0.15
Matches are distributed among these distances:
20 10 0.04
21 20 0.08
22 68 0.26
23 119 0.45
24 49 0.18
ACGTcount: A:0.43, C:0.19, G:0.13, T:0.25
Consensus pattern (23 bp):
CACAAATTTGGACAGCATGTATA
Found at i:4720 original size:91 final size:91
Alignment explanation
Indices: 4452--4839 Score: 635
Period size: 91 Copynumber: 4.3 Consensus size: 91
4442 ATTACAGCAT
4452 TTCA-CAAAATTGGCAGCATACATACACAATTTGGACAGCACTTATACACAAAATTTAA-AGCAT
1 TTCACCAAAATTGGCAGCATACATACACAATTTGGACAGCACTTATACACAAAATTTAACAGCAT
4515 GTATATACAAAATTGGACAGCATTGA
66 GTATATACAAAATTGGACAGCATTGA
* *
4541 TTCACCAAAATTGGGCAGCATACATATACAAATTTGGACAGCACTTATACACAAAATATAACAGC
1 TTCACCAAAATT-GGCAGCATACATACAC-AATTTGGACAGCACTTATACACAAAATTTAACAGC
*
4606 ATGTATATACAAAATTGGACAGCATTTA
64 ATGTATATACAAAATTGGACAGCATTGA
4634 TTCACCAAAATTGGCAGCATACATACACAAATTTGGACAGCA-TTATACACAAAATTTAACAGCA
1 TTCACCAAAATTGGCAGCATACATACAC-AATTTGGACAGCACTTATACACAAAATTTAACAGCA
4698 TGTATATACAAAATTGGACAGCATT-A
65 TGTATATACAAAATTGGACAGCATTGA
4724 TTCACCCAAAATTGGCAGCATACATAC-CAATTTGGACAGCA-TTATACACAAAATTTAACAGCA
1 TTCA-CCAAAATTGGCAGCATACATACACAATTTGGACAGCACTTATACACAAAATTTAACAGCA
*
4787 TGTATATACAAAATTTGACAGCATTGA
65 TGTATATACAAAATTGGACAGCATTGA
* *
4814 TTTATCAAAATTGGGCAGCATACATA
1 TTCACCAAAATT-GGCAGCATACATA
4840 TAACAATTGG
Statistics
Matches: 284, Mismatches: 8, Indels: 13
0.93 0.03 0.04
Matches are distributed among these distances:
89 70 0.25
90 30 0.11
91 83 0.29
92 59 0.21
93 42 0.15
ACGTcount: A:0.42, C:0.19, G:0.13, T:0.26
Consensus pattern (91 bp):
TTCACCAAAATTGGCAGCATACATACACAATTTGGACAGCACTTATACACAAAATTTAACAGCAT
GTATATACAAAATTGGACAGCATTGA
Found at i:4884 original size:89 final size:92
Alignment explanation
Indices: 4418--4856 Score: 569
Period size: 91 Copynumber: 4.9 Consensus size: 92
4408 AACATATAAC
*
4418 AAAATT-ACAGCATATAATATA-AAAATT--ACAGCA-T--TTCA-CAAAATTGGCAGCATACAT
1 AAAATTAACAGCATGT-ATATACAAAATTGGACAGCATTGATTCACCAAAATTGGCAGCATACAT
*
4475 A-CAC-AATTTGGACAGCACTTATACACA
65 ATAACAAATTTGGACAGCA-TTATACACA
*
4502 AAATTTAA-AGCATGTATATACAAAATTGGACAGCATTGATTCACCAAAATTGGGCAGCATACAT
1 AAAATTAACAGCATGTATATACAAAATTGGACAGCATTGATTCACCAAAATT-GGCAGCATACAT
4566 AT-ACAAATTTGGACAGCACTTATACAC-
65 ATAACAAATTTGGACAGCA-TTATACACA
*
4593 AAAATATAACAGCATGTATATACAAAATTGGACAGCATTTATTCACCAAAATTGGCAGCATACAT
1 AAAAT-TAACAGCATGTATATACAAAATTGGACAGCATTGATTCACCAAAATTGGCAGCATACAT
*
4658 A-CACAAATTTGGACAGCATTATACACA
65 ATAACAAATTTGGACAGCATTATACACA
*
4685 AAATTTAACAGCATGTATATACAAAATTGGACAGCATT-ATTCACCCAAAATTGGCAGCATAC--
1 AAAATTAACAGCATGTATATACAAAATTGGACAGCATTGATTCA-CCAAAATTGGCAGCATACAT
*
4747 AT-ACCAATTTGGACAGCATTATACACA
65 ATAACAAATTTGGACAGCATTATACACA
* * * *
4774 AAATTTAACAGCATGTATATACAAAATTTGACAGCATTGATTTATCAAAATTGGGCAGCATACAT
1 AAAATTAACAGCATGTATATACAAAATTGGACAGCATTGATTCACCAAAATT-GGCAGCATACAT
4839 ATAAC-AA-TTGG-CAGCATT
65 ATAACAAATTTGGACAGCATT
4857 TAAGCATAAC
Statistics
Matches: 324, Mismatches: 9, Indels: 38
0.87 0.02 0.10
Matches are distributed among these distances:
83 5 0.02
84 17 0.05
85 1 0.00
86 6 0.02
87 1 0.00
89 73 0.23
90 33 0.10
91 82 0.25
92 62 0.19
93 44 0.14
ACGTcount: A:0.43, C:0.18, G:0.13, T:0.26
Consensus pattern (92 bp):
AAAATTAACAGCATGTATATACAAAATTGGACAGCATTGATTCACCAAAATTGGCAGCATACATA
TAACAAATTTGGACAGCATTATACACA
Found at i:5641 original size:27 final size:28
Alignment explanation
Indices: 5577--5702 Score: 173
Period size: 28 Copynumber: 4.5 Consensus size: 28
5567 ATTTAATAAG
** * *
5577 CTCGCACACTTAGTGCTCAATAATCAAA
1 CTCGCACACTTAGTGCTTTACAATTAAA
*
5605 CTCGCACACTTAGTGCTTTACCATT-AA
1 CTCGCACACTTAGTGCTTTACAATTAAA
*
5632 CTCGCACACTTAGTGCTCTACAATTAAA
1 CTCGCACACTTAGTGCTTTACAATTAAA
*
5660 CTCGCACACTTAGTGCTTTATAATTAAA
1 CTCGCACACTTAGTGCTTTACAATTAAA
*
5688 TTCGCACACTTAGTG
1 CTCGCACACTTAGTG
5703 TCGAAATCAA
Statistics
Matches: 87, Mismatches: 10, Indels: 2
0.88 0.10 0.02
Matches are distributed among these distances:
27 25 0.29
28 62 0.71
ACGTcount: A:0.30, C:0.27, G:0.12, T:0.31
Consensus pattern (28 bp):
CTCGCACACTTAGTGCTTTACAATTAAA
Found at i:5642 original size:55 final size:56
Alignment explanation
Indices: 5577--5702 Score: 191
Period size: 55 Copynumber: 2.3 Consensus size: 56
5567 ATTTAATAAG
* *
5577 CTCGCACACTTAGTGCTCAATAATCAAACTCGCACACTTAGTGCTTTACCATT-AA
1 CTCGCACACTTAGTGCTCAACAATCAAACTCGCACACTTAGTGCTTTACAATTAAA
* * *
5632 CTCGCACACTTAGTGCTCTACAATTAAACTCGCACACTTAGTGCTTTATAATTAAA
1 CTCGCACACTTAGTGCTCAACAATCAAACTCGCACACTTAGTGCTTTACAATTAAA
*
5688 TTCGCACACTTAGTG
1 CTCGCACACTTAGTG
5703 TCGAAATCAA
Statistics
Matches: 64, Mismatches: 6, Indels: 1
0.90 0.08 0.01
Matches are distributed among these distances:
55 48 0.75
56 16 0.25
ACGTcount: A:0.30, C:0.27, G:0.12, T:0.31
Consensus pattern (56 bp):
CTCGCACACTTAGTGCTCAACAATCAAACTCGCACACTTAGTGCTTTACAATTAAA
Found at i:11816 original size:21 final size:22
Alignment explanation
Indices: 11787--11830 Score: 72
Period size: 22 Copynumber: 2.0 Consensus size: 22
11777 GGACAGCTCT
11787 TATACAT-AAAAATTGACAGCA
1 TATACATAAAAAATTGACAGCA
*
11808 TATATATAAAAAATTGACAGCA
1 TATACATAAAAAATTGACAGCA
11830 T
1 T
11831 TTTATTTCAC
Statistics
Matches: 21, Mismatches: 1, Indels: 1
0.91 0.04 0.04
Matches are distributed among these distances:
21 6 0.29
22 15 0.71
ACGTcount: A:0.52, C:0.11, G:0.09, T:0.27
Consensus pattern (22 bp):
TATACATAAAAAATTGACAGCA
Found at i:11933 original size:22 final size:21
Alignment explanation
Indices: 11872--11937 Score: 62
Period size: 22 Copynumber: 3.0 Consensus size: 21
11862 AGGCAGCAAC
*
11872 ATATACCAATTTGGACAGCACTT
1 ATATA-CAAATTGGACAGCA-TT
* *
11895 ATACACAAAATT-AACAGCATGT
1 ATATAC-AAATTGGACAGCAT-T
11917 ATATACAAATTGGACAGCATT
1 ATATACAAATTGGACAGCATT
11938 TATTCACCAA
Statistics
Matches: 35, Mismatches: 5, Indels: 8
0.73 0.10 0.17
Matches are distributed among these distances:
21 7 0.20
22 20 0.57
23 8 0.23
ACGTcount: A:0.42, C:0.18, G:0.12, T:0.27
Consensus pattern (21 bp):
ATATACAAATTGGACAGCATT
Found at i:12043 original size:23 final size:22
Alignment explanation
Indices: 12017--12169 Score: 123
Period size: 23 Copynumber: 6.6 Consensus size: 22
12007 ACAATTTAAC
12017 ACAGCATGTATATACAAAATTGG
1 ACAGCAT-TATATACAAAATTGG
12040 ACAGCATTAT-TCACCCAAAATTAGG
1 ACAGCATTATAT-A--CAAAATT-GG
* * *
12065 GCAGCA-TACATACACCAATTTGG
1 ACAGCATTATATACA--AAATTGG
* **
12088 ACAGCACTTATACACAAAATTTA
1 ACAGCA-TTATATACAAAATTGG
12111 ACAGCATGTATATACAAAATTGG
1 ACAGCAT-TATATACAAAATTGG
*
12134 ACAGCATTTTAT-CAAAAATTGG
1 ACAGCATTATATAC-AAAATTGG
12156 ACAGCATATATATA
1 ACAGCAT-TATATA
12170 ACAATTTGGG
Statistics
Matches: 103, Mismatches: 14, Indels: 25
0.73 0.10 0.18
Matches are distributed among these distances:
21 2 0.02
22 26 0.25
23 47 0.46
24 14 0.14
25 14 0.14
ACGTcount: A:0.42, C:0.18, G:0.13, T:0.26
Consensus pattern (22 bp):
ACAGCATTATATACAAAATTGG
Found at i:12136 original size:46 final size:45
Alignment explanation
Indices: 11980--12190 Score: 142
Period size: 45 Copynumber: 4.5 Consensus size: 45
11970 ATACAATAAA
* *
11980 AAAATTGAACAGCATTATAAAACACAAACAATTTAACACAGCATGTATATAC
1 AAAATTGGACAGCATTAT---ACAC-AA-AATTT-A-ACAGCATATATATAC
* * * *
12032 AAAATTGGACAGCATTATTCACCCAAAA-TTAGGGCAGCATACATACAC
1 AAAATTGGACAGCATTA-T-ACACAAAATTTA--ACAGCATATATATAC
* * *
12080 CAATTTGGACAGCACTTATACACAAAATTTAACAGCATGTATATAC
1 AAAATTGGACAGCA-TTATACACAAAATTTAACAGCATATATATAC
* **
12126 AAAATTGGACAGCATTTTATCA-AAAATTGGACAGCATATATATA-
1 AAAATTGGACAGCATTATA-CACAAAATTTAACAGCATATATATAC
* *
12170 ACAATTTGGGCAGCA-TATACA
1 A-AAATTGGACAGCATTATACA
12191 TAAGCAATTA
Statistics
Matches: 129, Mismatches: 24, Indels: 21
0.74 0.14 0.12
Matches are distributed among these distances:
43 2 0.02
44 4 0.03
45 34 0.26
46 25 0.19
47 8 0.06
48 29 0.22
49 5 0.04
50 2 0.02
51 3 0.02
52 16 0.12
53 1 0.01
ACGTcount: A:0.45, C:0.18, G:0.12, T:0.25
Consensus pattern (45 bp):
AAAATTGGACAGCATTATACACAAAATTTAACAGCATATATATAC
Found at i:12137 original size:94 final size:91
Alignment explanation
Indices: 12017--12184 Score: 246
Period size: 94 Copynumber: 1.8 Consensus size: 91
12007 ACAATTTAAC
* * *
12017 ACAGCATGTATATACAAAATTGGACAGCATTATTCACCCAAAATTAGGGCAGCATACATACACCA
1 ACAGCATGTATATACAAAATTGGACAGCATT-TT-ACCAAAAATT-GGACAGCATACATACAACA
12082 ATTTGGACAGCACTTATACACAAAATTTA
63 ATTTGGACAGCACTTATACACAAAATTTA
* * *
12111 ACAGCATGTATATACAAAATTGGACAGCATTTTATCAAAAATTGGACAGCATATATATAACAATT
1 ACAGCATGTATATACAAAATTGGACAGCATTTTACCAAAAATTGGACAGCATACATACAACAATT
*
12176 TGGGCAGCA
66 TGGACAGCA
12185 TATACATAAG
Statistics
Matches: 67, Mismatches: 7, Indels: 3
0.87 0.09 0.04
Matches are distributed among these distances:
91 26 0.39
92 8 0.12
93 2 0.03
94 31 0.46
ACGTcount: A:0.42, C:0.18, G:0.14, T:0.26
Consensus pattern (91 bp):
ACAGCATGTATATACAAAATTGGACAGCATTTTACCAAAAATTGGACAGCATACATACAACAATT
TGGACAGCACTTATACACAAAATTTA
Found at i:12175 original size:22 final size:22
Alignment explanation
Indices: 12017--12193 Score: 92
Period size: 23 Copynumber: 7.7 Consensus size: 22
12007 ACAATTTAAC
*
12017 ACAGCATGTATATACAAAATTGG
1 ACAGCATATATATA-AAAATTGG
12040 ACAGCAT-TAT-TCACCCAAAATTAGG
1 ACAGCATATATAT-A---AAAATT-GG
* * * * *
12065 GCAGCATACATACACCAATTTGG
1 ACAGCATATATATA-AAAATTGG
* **
12088 ACAGCACT-TATACACAAAATTTA
1 ACAGCA-TATATATA-AAAATTGG
*
12111 ACAGCATGTATATACAAAATTGG
1 ACAGCATATATATA-AAAATTGG
*
12134 ACAGCAT-TTTATCAAAAATTGG
1 ACAGCATATATAT-AAAAATTGG
*
12156 ACAGCATATATATAACAATTTGG
1 ACAGCATATATATAA-AAATTGG
* *
12179 GCAGCATATACATAA
1 ACAGCATATATATAA
12194 GCAATTACAT
Statistics
Matches: 124, Mismatches: 19, Indels: 22
0.75 0.12 0.13
Matches are distributed among these distances:
21 1 0.01
22 26 0.21
23 73 0.59
24 13 0.10
25 8 0.06
26 3 0.02
ACGTcount: A:0.42, C:0.18, G:0.14, T:0.26
Consensus pattern (22 bp):
ACAGCATATATATAAAAATTGG
Found at i:12183 original size:23 final size:24
Alignment explanation
Indices: 12152--12199 Score: 71
Period size: 23 Copynumber: 2.0 Consensus size: 24
12142 TTATCAAAAA
*
12152 TTGGACAGCATATATATAA-CAAT
1 TTGGACAGCATATACATAAGCAAT
*
12175 TTGGGCAGCATATACATAAGCAAT
1 TTGGACAGCATATACATAAGCAAT
12199 T
1 T
12200 ACATAAATTA
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
23 17 0.77
24 5 0.23
ACGTcount: A:0.40, C:0.15, G:0.17, T:0.29
Consensus pattern (24 bp):
TTGGACAGCATATACATAAGCAAT
Found at i:12966 original size:27 final size:28
Alignment explanation
Indices: 12903--13006 Score: 149
Period size: 28 Copynumber: 3.8 Consensus size: 28
12893 ATTTAATAAG
** * *
12903 TCGCACACTTAGTGCTCAATAATCAAAC
1 TCGCACACTTAGTGCTTTACAATTAAAC
*
12931 TCGCACACTTAGTGCTTTACCATT-AAC
1 TCGCACACTTAGTGCTTTACAATTAAAC
12958 TCGCACACTTAGTGCTTTACAATTAAAC
1 TCGCACACTTAGTGCTTTACAATTAAAC
12986 TCGCACACTTAGTGC-TTACAA
1 TCGCACACTTAGTGCTTTACAA
13007 AAATGCAACA
Statistics
Matches: 69, Mismatches: 6, Indels: 3
0.88 0.08 0.04
Matches are distributed among these distances:
27 32 0.46
28 37 0.54
ACGTcount: A:0.31, C:0.28, G:0.12, T:0.30
Consensus pattern (28 bp):
TCGCACACTTAGTGCTTTACAATTAAAC
Found at i:13730 original size:16 final size:16
Alignment explanation
Indices: 13706--13782 Score: 56
Period size: 16 Copynumber: 4.9 Consensus size: 16
13696 AGATGATATG
* *
13706 ATATTTTTTTATTATT
1 ATATATTTTAATTATT
13722 ATATATTTTAATTATT
1 ATATATTTTAATTATT
* *
13738 ATAAATATATTAAAATATT
1 AT--ATAT-TTTAATTATT
13757 ATAT-TTTTAA--ATT
1 ATATATTTTAATTATT
13770 AT-T-TTTTAATTAT
1 ATATATTTTAATTAT
13783 AATAAAATCA
Statistics
Matches: 51, Mismatches: 5, Indels: 12
0.75 0.07 0.18
Matches are distributed among these distances:
12 7 0.14
13 5 0.10
14 2 0.04
15 4 0.08
16 17 0.33
17 2 0.04
18 4 0.08
19 10 0.20
ACGTcount: A:0.39, C:0.00, G:0.00, T:0.61
Consensus pattern (16 bp):
ATATATTTTAATTATT
Done.